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The map label for this gene is yteP [H]

Identifier: 225861601

GI number: 225861601

Start: 1637882

End: 1638799

Strand: Reverse

Name: yteP [H]

Synonym: SPT_1722

Alternate gene names: 225861601

Gene position: 1638799-1637882 (Counterclockwise)

Preceding gene: 225861602

Following gene: 225861600

Centisome position: 77.59

GC content: 36.27

Gene sequence:

>918_bases
ATGAATAGCAAAGCGAAGCAAGTTTCTCTTTGGGAAAGAATCAAGAAACAAAAACTCTTGTTATTGATGACTGTCCCTGG
TTTAGTTTTAACCTTTATCTTTAAATACATCCCTATGTATGGGGTTTTAATCGCATTTAAAGATTACAATCCCTTAAAAG
GAATTTTAGGGAGTGATTGGATTGGTTTTTCTGAGTTTACAAAATTCATATCCTCTCCCAACTTTGGTATCTTGTTAGCC
AACACATTAAAATTAAGTATCTATGGTTTATTGCTTGGCTTTTTACCACCAATCATTCTTGCTATTATGCTCAATCAACT
CTTGAGTGAAAAAGTCAAAAAACGAATTCAGCTCATTTTATACGCACCAAACTTTATCTCAGTCGTTGTTATTGTCGGTA
TGATTTTCCTCTTCTTTTCAGTGGGAGGACCAATCAACAATTTTCTTTCTATGTTTGGAATGAAGGCTGACTTCTTGACA
AATCCAGACTTCTTTAGACCTTTATACATCTTTAGTGGTATCTGGCAAGGAATGGGCTGGGCTTCAACGCTCTACACGGC
AACATTGGTAAATGTAGATCCAGCCTTAGTAGAAGCAGCTCGACTGGATGGAGCCAATATCTTCCAACGAATCTGGCACA
TTGATATTCCAGCTCTTAAGCCTATTATGGTTATCCAATTTGTTTTAGCTGCAGGTGGAATTATGAATGTCGGATATGAA
AAAGCATTCTTGATGCAGACATCGTTAAATTTGCCAACTTCTGAAATTATCTCGACATATGTCTATAAAGTTGGTCTTGT
ATCAGGAGACTATTCTTACTCAACAGCGGTTGGTTTGTTTAATGCAGTGATTAACGTAGTATTGCTTGTTGCAGTTAACC
AAATCGTTAAACGCATGAATAATGGTGAAGGAATTTAA

Upstream 100 bases:

>100_bases
TTAAAACAAAAATGAAACGTTTCAAAAAAAGAAATAAAGAGACAGCGCCAAGCGCTATCTTTTCTAGAACAAAAATGAAA
CGTTTCAAAAGGAGGTTGCT

Downstream 100 bases:

>100_bases
GGAGGAAAGTATGAAAAATTCGATTATGGATACAAAATTTGATAGACGTATCTTACTCTTAAATAAAATCATTATTGTCT
TTATCGTTTTGATGACTTTG

Product: protein LplB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MNSKAKQVSLWERIKKQKLLLLMTVPGLVLTFIFKYIPMYGVLIAFKDYNPLKGILGSDWIGFSEFTKFISSPNFGILLA
NTLKLSIYGLLLGFLPPIILAIMLNQLLSEKVKKRIQLILYAPNFISVVVIVGMIFLFFSVGGPINNFLSMFGMKADFLT
NPDFFRPLYIFSGIWQGMGWASTLYTATLVNVDPALVEAARLDGANIFQRIWHIDIPALKPIMVIQFVLAAGGIMNVGYE
KAFLMQTSLNLPTSEIISTYVYKVGLVSGDYSYSTAVGLFNAVINVVLLVAVNQIVKRMNNGEGI

Sequences:

>Translated_305_residues
MNSKAKQVSLWERIKKQKLLLLMTVPGLVLTFIFKYIPMYGVLIAFKDYNPLKGILGSDWIGFSEFTKFISSPNFGILLA
NTLKLSIYGLLLGFLPPIILAIMLNQLLSEKVKKRIQLILYAPNFISVVVIVGMIFLFFSVGGPINNFLSMFGMKADFLT
NPDFFRPLYIFSGIWQGMGWASTLYTATLVNVDPALVEAARLDGANIFQRIWHIDIPALKPIMVIQFVLAAGGIMNVGYE
KAFLMQTSLNLPTSEIISTYVYKVGLVSGDYSYSTAVGLFNAVINVVLLVAVNQIVKRMNNGEGI
>Mature_305_residues
MNSKAKQVSLWERIKKQKLLLLMTVPGLVLTFIFKYIPMYGVLIAFKDYNPLKGILGSDWIGFSEFTKFISSPNFGILLA
NTLKLSIYGLLLGFLPPIILAIMLNQLLSEKVKKRIQLILYAPNFISVVVIVGMIFLFFSVGGPINNFLSMFGMKADFLT
NPDFFRPLYIFSGIWQGMGWASTLYTATLVNVDPALVEAARLDGANIFQRIWHIDIPALKPIMVIQFVLAAGGIMNVGYE
KAFLMQTSLNLPTSEIISTYVYKVGLVSGDYSYSTAVGLFNAVINVVLLVAVNQIVKRMNNGEGI

Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane. May play a role in the degradation of type I rhamnogalacturonan derived from plant cell walls [H]

COG id: COG4209

COG function: function code G; ABC-type polysaccharide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33918; Mature: 33918

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSKAKQVSLWERIKKQKLLLLMTVPGLVLTFIFKYIPMYGVLIAFKDYNPLKGILGSDW
CCCCHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHCCCCCC
IGFSEFTKFISSPNFGILLANTLKLSIYGLLLGFLPPIILAIMLNQLLSEKVKKRIQLIL
CCHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
YAPNFISVVVIVGMIFLFFSVGGPINNFLSMFGMKADFLTNPDFFRPLYIFSGIWQGMGW
ECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHCCCH
ASTLYTATLVNVDPALVEAARLDGANIFQRIWHIDIPALKPIMVIQFVLAAGGIMNVGYE
HHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHCCHH
KAFLMQTSLNLPTSEIISTYVYKVGLVSGDYSYSTAVGLFNAVINVVLLVAVNQIVKRMN
HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NGEGI
CCCCC
>Mature Secondary Structure
MNSKAKQVSLWERIKKQKLLLLMTVPGLVLTFIFKYIPMYGVLIAFKDYNPLKGILGSDW
CCCCHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHCCCCCC
IGFSEFTKFISSPNFGILLANTLKLSIYGLLLGFLPPIILAIMLNQLLSEKVKKRIQLIL
CCHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
YAPNFISVVVIVGMIFLFFSVGGPINNFLSMFGMKADFLTNPDFFRPLYIFSGIWQGMGW
ECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHCCCH
ASTLYTATLVNVDPALVEAARLDGANIFQRIWHIDIPALKPIMVIQFVLAAGGIMNVGYE
HHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHCCHH
KAFLMQTSLNLPTSEIISTYVYKVGLVSGDYSYSTAVGLFNAVINVVLLVAVNQIVKRMN
HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NGEGI
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]