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The map label for this gene is lytB [H]

Identifier: 225861406

GI number: 225861406

Start: 1442921

End: 1444402

Strand: Reverse

Name: lytB [H]

Synonym: SPT_1513

Alternate gene names: 225861406

Gene position: 1444402-1442921 (Counterclockwise)

Preceding gene: 225861407

Following gene: 225861405

Centisome position: 68.39

GC content: 39.47

Gene sequence:

>1482_bases
TTGAAAACAAAAATTGGAAAAATTGGATTAGCCAGTATCTGTTTACTAGGCTTGGCAACTAGCCATGTCGCTGCAAATGA
AACTGAAGTTTCAAAAACTTCGCAGGATACAACGACAGTTTCAAGTAGTTCAGAACAAAATCAGTCTTCTAATAAAACTC
AAACGAGCACAGGTGTAAAGACCAATGTTGCTGCCCACTGGGATGGGGATTATTATGTAAAGGCTGATGGTTCTAAAGCT
CAAAGTGAATGGATTTTTGACAACTACTATAAGGCTTGGTTTTATATTAAGTCAGATGGTCGTTACGCGCAGAATGAATG
GCATGGAAATTACTACCTGAAATCAGGTGGCTATATGGCCCAAAACGAGTGGCTTTATGATAATAATTACAAGAGTTGGT
TTTATCTCAAGTCAGATGGGGCTTATGCTCATCAAGAATGGCAATTGATTGGAAATAAGTGGTACTACTTCAAGAAGTGG
GGTTACATGGCTAAAAGCCAATGGCAAGGAAGTTATTTCTTGAATGGTCAAGGTGCCATGATGCAAAATGAATGGCTTTA
TGATCCAGCTTATTCTGCTTATTTTTATCTAAAATCCGATGGAACTTATGCCAACCAAGAGTGGCAAAAAGTGGGCGGCA
AATGGTACTATTTCAAGAAGTGGGGCTATATGGCTCGGAATGAGTGGCAAGGCAACTACTATTTGACTGGAAGTGGTGCC
ATGGCGACTGACGAAGTGATTATGGATGGTGCTCGCTATATCTTTGCGGCCTCTGGTGAGCTCAAAGAAAAGAAAGATTT
GAATGTCGGCTGGGTTCACAGAGATGGTAAACGCTATTTCTTTAATAATAGAGAAGAACAAGTAGGAACCGAACATGCTA
AGAAAGTTATTGATATTAGTGAACACAATGGTCGTATCAATGATTGGAAAAAGGTTATTGATGAAAATGAAGTAGATGGT
GTCATTGTTCGTCTAGGTTATAGCGGTAAAGAAGACAAGGAATTGGCGCATAACATTAAGGAGTTAAACCGTCTGGGAAT
TCCTTATGGTGTCTATCTCTATACCTATGCTGAAAATGAGACCGATGCTGAGAATGACGCTGAACAGACCATTGAACTTC
TGAAGAAATACAATATGAACTTGTCTTACCCTATCTACTATGATGTTGAGAACTGGGAGTATGTGAATAAAAGTAAGCGT
GCTCCGAGTGATACAGGTACTTGGGTTAAGATTATTAACAAGTACATGGAGACGATGAAGCAGGCGGGCTATCAAAATGT
GTATGTCTATAGCTATCGTAGTTTATTACAGACGCGTTTAAAACACCCAGATATTTTAAAACATGTAAACTGGGTAGCGG
CCTATACCAATGCTTTAGAATGGGAAAACCCTCATTATTCAGGAGAAAAAGGTTGGCAATATACCTCTTCTGAATACATG
AAAGGAATCCAAGGGCGCGTAGATGTCAGCGTTTGGTATTAA

Upstream 100 bases:

>100_bases
TTCTTGGCTTTGCTTGACTTTGTAAAATAATCAGTAAGTAGCAAAAGCTAGGTGGAACAGCATTCAGATGTCTGTTCCAT
TTTTTATAGGAGAGGAAAGA

Downstream 100 bases:

>100_bases
GCGATGATTTGAAAGAGGGATGTGATAGTAGCACCCTCTTTTTCTTTGTTTTATGGCAGTTCATCCTCGAGTAAATTCAA
GATCTCGCTAGGAAATAAAT

Product: lysozyme

Products: NA

Alternate protein names: Murein hydrolase [H]

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MKTKIGKIGLASICLLGLATSHVAANETEVSKTSQDTTTVSSSSEQNQSSNKTQTSTGVKTNVAAHWDGDYYVKADGSKA
QSEWIFDNYYKAWFYIKSDGRYAQNEWHGNYYLKSGGYMAQNEWLYDNNYKSWFYLKSDGAYAHQEWQLIGNKWYYFKKW
GYMAKSQWQGSYFLNGQGAMMQNEWLYDPAYSAYFYLKSDGTYANQEWQKVGGKWYYFKKWGYMARNEWQGNYYLTGSGA
MATDEVIMDGARYIFAASGELKEKKDLNVGWVHRDGKRYFFNNREEQVGTEHAKKVIDISEHNGRINDWKKVIDENEVDG
VIVRLGYSGKEDKELAHNIKELNRLGIPYGVYLYTYAENETDAENDAEQTIELLKKYNMNLSYPIYYDVENWEYVNKSKR
APSDTGTWVKIINKYMETMKQAGYQNVYVYSYRSLLQTRLKHPDILKHVNWVAAYTNALEWENPHYSGEKGWQYTSSEYM
KGIQGRVDVSVWY

Sequences:

>Translated_493_residues
MKTKIGKIGLASICLLGLATSHVAANETEVSKTSQDTTTVSSSSEQNQSSNKTQTSTGVKTNVAAHWDGDYYVKADGSKA
QSEWIFDNYYKAWFYIKSDGRYAQNEWHGNYYLKSGGYMAQNEWLYDNNYKSWFYLKSDGAYAHQEWQLIGNKWYYFKKW
GYMAKSQWQGSYFLNGQGAMMQNEWLYDPAYSAYFYLKSDGTYANQEWQKVGGKWYYFKKWGYMARNEWQGNYYLTGSGA
MATDEVIMDGARYIFAASGELKEKKDLNVGWVHRDGKRYFFNNREEQVGTEHAKKVIDISEHNGRINDWKKVIDENEVDG
VIVRLGYSGKEDKELAHNIKELNRLGIPYGVYLYTYAENETDAENDAEQTIELLKKYNMNLSYPIYYDVENWEYVNKSKR
APSDTGTWVKIINKYMETMKQAGYQNVYVYSYRSLLQTRLKHPDILKHVNWVAAYTNALEWENPHYSGEKGWQYTSSEYM
KGIQGRVDVSVWY
>Mature_493_residues
MKTKIGKIGLASICLLGLATSHVAANETEVSKTSQDTTTVSSSSEQNQSSNKTQTSTGVKTNVAAHWDGDYYVKADGSKA
QSEWIFDNYYKAWFYIKSDGRYAQNEWHGNYYLKSGGYMAQNEWLYDNNYKSWFYLKSDGAYAHQEWQLIGNKWYYFKKW
GYMAKSQWQGSYFLNGQGAMMQNEWLYDPAYSAYFYLKSDGTYANQEWQKVGGKWYYFKKWGYMARNEWQGNYYLTGSGA
MATDEVIMDGARYIFAASGELKEKKDLNVGWVHRDGKRYFFNNREEQVGTEHAKKVIDISEHNGRINDWKKVIDENEVDG
VIVRLGYSGKEDKELAHNIKELNRLGIPYGVYLYTYAENETDAENDAEQTIELLKKYNMNLSYPIYYDVENWEYVNKSKR
APSDTGTWVKIINKYMETMKQAGYQNVYVYSYRSLLQTRLKHPDILKHVNWVAAYTNALEWENPHYSGEKGWQYTSSEYM
KGIQGRVDVSVWY

Specific function: Plays an important role in cell wall degradation and cell separation [H]

COG id: COG5263

COG function: function code R; FOG: Glucan-binding domain (YG repeat)

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 13 cell wall-binding repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018337
- InterPro:   IPR013338
- InterPro:   IPR002901 [H]

Pfam domain/function: PF01473 CW_binding_1; PF01832 Glucosaminidase [H]

EC number: =3.2.1.96 [H]

Molecular weight: Translated: 57609; Mature: 57609

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKIGKIGLASICLLGLATSHVAANETEVSKTSQDTTTVSSSSEQNQSSNKTQTSTGVK
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCE
TNVAAHWDGDYYVKADGSKAQSEWIFDNYYKAWFYIKSDGRYAQNEWHGNYYLKSGGYMA
EEEEEEECCCEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEECCCEEE
QNEWLYDNNYKSWFYLKSDGAYAHQEWQLIGNKWYYFKKWGYMAKSQWQGSYFLNGQGAM
CCCEEEECCCCEEEEEECCCCCCCEEEEEECCEEEEEEECCCCCCCCCCCEEEECCCCCE
MQNEWLYDPAYSAYFYLKSDGTYANQEWQKVGGKWYYFKKWGYMARNEWQGNYYLTGSGA
EECCEEECCCCEEEEEEECCCCCCCHHHHHCCCEEEEEEECCCCCCCCCCCCEEEEECCC
MATDEVIMDGARYIFAASGELKEKKDLNVGWVHRDGKRYFFNNREEQVGTEHAKKVIDIS
CCHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEECCCEEECCCCHHHHCHHHHHHEEEEC
EHNGRINDWKKVIDENEVDGVIVRLGYSGKEDKELAHNIKELNRLGIPYGVYLYTYAENE
CCCCCHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCC
TDAENDAEQTIELLKKYNMNLSYPIYYDVENWEYVNKSKRAPSDTGTWVKIINKYMETMK
CCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
QAGYQNVYVYSYRSLLQTRLKHPDILKHVNWVAAYTNALEWENPHYSGEKGWQYTSSEYM
HCCCCEEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECHHHHH
KGIQGRVDVSVWY
HCCCCEEEEEEEC
>Mature Secondary Structure
MKTKIGKIGLASICLLGLATSHVAANETEVSKTSQDTTTVSSSSEQNQSSNKTQTSTGVK
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCE
TNVAAHWDGDYYVKADGSKAQSEWIFDNYYKAWFYIKSDGRYAQNEWHGNYYLKSGGYMA
EEEEEEECCCEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEECCCEEE
QNEWLYDNNYKSWFYLKSDGAYAHQEWQLIGNKWYYFKKWGYMAKSQWQGSYFLNGQGAM
CCCEEEECCCCEEEEEECCCCCCCEEEEEECCEEEEEEECCCCCCCCCCCEEEECCCCCE
MQNEWLYDPAYSAYFYLKSDGTYANQEWQKVGGKWYYFKKWGYMARNEWQGNYYLTGSGA
EECCEEECCCCEEEEEEECCCCCCCHHHHHCCCEEEEEEECCCCCCCCCCCCEEEEECCC
MATDEVIMDGARYIFAASGELKEKKDLNVGWVHRDGKRYFFNNREEQVGTEHAKKVIDIS
CCHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEECCCEEECCCCHHHHCHHHHHHEEEEC
EHNGRINDWKKVIDENEVDGVIVRLGYSGKEDKELAHNIKELNRLGIPYGVYLYTYAENE
CCCCCHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCC
TDAENDAEQTIELLKKYNMNLSYPIYYDVENWEYVNKSKRAPSDTGTWVKIINKYMETMK
CCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
QAGYQNVYVYSYRSLLQTRLKHPDILKHVNWVAAYTNALEWENPHYSGEKGWQYTSSEYM
HCCCCEEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECHHHHH
KGIQGRVDVSVWY
HCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11463916 [H]