Click here to switch to the map view.

The map label for this gene is yknX [H]

Identifier: 225861312

GI number: 225861312

Start: 1348649

End: 1349848

Strand: Reverse

Name: yknX [H]

Synonym: SPT_1415

Alternate gene names: 225861312

Gene position: 1349848-1348649 (Counterclockwise)

Preceding gene: 225861316

Following gene: 225861311

Centisome position: 63.91

GC content: 41.92

Gene sequence:

>1200_bases
ATGAAGAAAAAGAATGGTAAAGCTAAAAAGTGGCAACTGTATGCAGCAATCGGTGCTGCGAGTGTAGTTGTATTGGGTGC
CGGGGGGATTTTACTTTTTAGACAACCTTCTCAGACTGCTGTAAAAGATGAGCCTACTCATCTTGTTGTTGCCAAGGAAG
GAAGCGTGGCATCCTCTGTTTTATTGTCAGGGACAGTAACAGCAAAAAATGAACAATATGTTTATTTTGATGCTAGTAAG
GGTGATTTAGATGAAATCCTTGTTTCTGTGGGCGATAAGGTCAGCGAAGGGCAGGCTTTAGTCAAGTACAGTAGTTCAGA
AGCGCAGGCGGCCTATGATTCAGCTAGTCGAGCAGTAGCTAAGGCAGATCGTCATATCAATGAACTCAATCAAGCACGAA
ATGAAGCCGCTTCAGCTCAGGCTCCACAGTTACCAGCGCCAGTAGGAGGAGAAGATGCAACGGTGCAAAGCCCAACTCCA
GTGGCTGGAAATTCTGTTGCTTCTATTGATGCTCAATTGGGTGATGCCCGTGATGCGCGTGCAGATGCTGCAGCGCAATT
AAGCAAGGCTCAAAGTCAATTGGATGCAACAACTGTTCTCAGTACCCTAGAGGGAACTGTAGTCGAAGTCAATAGCAATG
TTTCTAAATCTCCAACAGGGGCGAGTCAAGTTATGGTTCATATTGTCAGCAATGAAAATTTACAAGTCAAGGGAGAATTG
TCTGAGTACAATCTAGCCAACCTTTCTGTAGGTCAAGAAGTAAGCTTTACTTCTAAAGTGTATCCTGATAAAAAATGGAC
TGGGAAATTAAGCTATATTTCTGACTATCCTAAAAACAATGGTGAAGCAGCTAGTCCAGCAACCGGGAATAATACAGGTT
CTAAATACCCTTATACTATTGATGTGACAGGCGAGGTTGGTGATTTGAAACAGGGTTTTTCTGTCAACATTGAGGTTAAA
AGCAAAACTAAGGCTATTCTTGTTCCTGTTAGCAGTCTAGTAATGGATGATAGTAAAAATTATGTCTGGATTGTGGATGA
ACAACAAAAGGCTAAAAAAGTTGAGGTTTCATTGGGAAATGCTGACGCAGAAAATCAAGAAATCACTTCTGGTTTAACGA
ATGGTGCTAAGGTCATCAGTAATCCAACATCTTCCTTGGAAGAAGGAAAAGAGGTGAAGACTGATGAAGCAACTAATTAG

Upstream 100 bases:

>100_bases
TAATCCTGAACTGCCATTATTTCCATCTGAACTGCATTGTTTGCTGGAGGGAAATTTGGTATAATAGCAAAGTATTGTAA
AAAAGAAAAGGAGTTTCATT

Downstream 100 bases:

>100_bases
TCTAAAAAATATCTTCAGAAGCTACCGTAATGGTGACCAAGAATTGCAGGTTCTCAAAAATATCAATCTAGAAGTGAATG
AGGGTGAATTTGTAGCCATC

Product: membrane-fusion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MKKKNGKAKKWQLYAAIGAASVVVLGAGGILLFRQPSQTAVKDEPTHLVVAKEGSVASSVLLSGTVTAKNEQYVYFDASK
GDLDEILVSVGDKVSEGQALVKYSSSEAQAAYDSASRAVAKADRHINELNQARNEAASAQAPQLPAPVGGEDATVQSPTP
VAGNSVASIDAQLGDARDARADAAAQLSKAQSQLDATTVLSTLEGTVVEVNSNVSKSPTGASQVMVHIVSNENLQVKGEL
SEYNLANLSVGQEVSFTSKVYPDKKWTGKLSYISDYPKNNGEAASPATGNNTGSKYPYTIDVTGEVGDLKQGFSVNIEVK
SKTKAILVPVSSLVMDDSKNYVWIVDEQQKAKKVEVSLGNADAENQEITSGLTNGAKVISNPTSSLEEGKEVKTDEATN

Sequences:

>Translated_399_residues
MKKKNGKAKKWQLYAAIGAASVVVLGAGGILLFRQPSQTAVKDEPTHLVVAKEGSVASSVLLSGTVTAKNEQYVYFDASK
GDLDEILVSVGDKVSEGQALVKYSSSEAQAAYDSASRAVAKADRHINELNQARNEAASAQAPQLPAPVGGEDATVQSPTP
VAGNSVASIDAQLGDARDARADAAAQLSKAQSQLDATTVLSTLEGTVVEVNSNVSKSPTGASQVMVHIVSNENLQVKGEL
SEYNLANLSVGQEVSFTSKVYPDKKWTGKLSYISDYPKNNGEAASPATGNNTGSKYPYTIDVTGEVGDLKQGFSVNIEVK
SKTKAILVPVSSLVMDDSKNYVWIVDEQQKAKKVEVSLGNADAENQEITSGLTNGAKVISNPTSSLEEGKEVKTDEATN
>Mature_399_residues
MKKKNGKAKKWQLYAAIGAASVVVLGAGGILLFRQPSQTAVKDEPTHLVVAKEGSVASSVLLSGTVTAKNEQYVYFDASK
GDLDEILVSVGDKVSEGQALVKYSSSEAQAAYDSASRAVAKADRHINELNQARNEAASAQAPQLPAPVGGEDATVQSPTP
VAGNSVASIDAQLGDARDARADAAAQLSKAQSQLDATTVLSTLEGTVVEVNSNVSKSPTGASQVMVHIVSNENLQVKGEL
SEYNLANLSVGQEVSFTSKVYPDKKWTGKLSYISDYPKNNGEAASPATGNNTGSKYPYTIDVTGEVGDLKQGFSVNIEVK
SKTKAILVPVSSLVMDDSKNYVWIVDEQQKAKKVEVSLGNADAENQEITSGLTNGAKVISNPTSSLEEGKEVKTDEATN

Specific function: The Emr Locus Confers Resistance To Substances Of High Hydrophobicity. Emra Probably Participate In A Transport System To Extrude Toxins And Drugs From The Cell. [C]

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41884; Mature: 41884

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKNGKAKKWQLYAAIGAASVVVLGAGGILLFRQPSQTAVKDEPTHLVVAKEGSVASSV
CCCCCCCCCEEEEEEECCCEEEEEEECCCEEEEECCCCCCCCCCCCEEEEECCCCCHHHE
LLSGTVTAKNEQYVYFDASKGDLDEILVSVGDKVSEGQALVKYSSSEAQAAYDSASRAVA
EEECEEEECCCEEEEEECCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHH
KADRHINELNQARNEAASAQAPQLPAPVGGEDATVQSPTPVAGNSVASIDAQLGDARDAR
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHCCCCCHHH
ADAAAQLSKAQSQLDATTVLSTLEGTVVEVNSNVSKSPTGASQVMVHIVSNENLQVKGEL
HHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEECC
SEYNLANLSVGQEVSFTSKVYPDKKWTGKLSYISDYPKNNGEAASPATGNNTGSKYPYTI
CCCCEEECCCCCCCCCHHHCCCCCCCCCEEEEHHCCCCCCCCCCCCCCCCCCCCCCCEEE
DVTGEVGDLKQGFSVNIEVKSKTKAILVPVSSLVMDDSKNYVWIVDEQQKAKKVEVSLGN
EECCCCCCCCCCCEEEEEEECCCEEEEEEHHHHEEECCCCEEEEECCCCCCEEEEEEECC
ADAENQEITSGLTNGAKVISNPTSSLEEGKEVKTDEATN
CCCCCHHHHHHHCCCHHEECCCHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKKKNGKAKKWQLYAAIGAASVVVLGAGGILLFRQPSQTAVKDEPTHLVVAKEGSVASSV
CCCCCCCCCEEEEEEECCCEEEEEEECCCEEEEECCCCCCCCCCCCEEEEECCCCCHHHE
LLSGTVTAKNEQYVYFDASKGDLDEILVSVGDKVSEGQALVKYSSSEAQAAYDSASRAVA
EEECEEEECCCEEEEEECCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHH
KADRHINELNQARNEAASAQAPQLPAPVGGEDATVQSPTPVAGNSVASIDAQLGDARDAR
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHCCCCCHHH
ADAAAQLSKAQSQLDATTVLSTLEGTVVEVNSNVSKSPTGASQVMVHIVSNENLQVKGEL
HHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEECC
SEYNLANLSVGQEVSFTSKVYPDKKWTGKLSYISDYPKNNGEAASPATGNNTGSKYPYTI
CCCCEEECCCCCCCCCHHHCCCCCCCCCEEEEHHCCCCCCCCCCCCCCCCCCCCCCCEEE
DVTGEVGDLKQGFSVNIEVKSKTKAILVPVSSLVMDDSKNYVWIVDEQQKAKKVEVSLGN
EECCCCCCCCCCCEEEEEEECCCEEEEEEHHHHEEECCCCEEEEECCCCCCEEEEEEECC
ADAENQEITSGLTNGAKVISNPTSSLEEGKEVKTDEATN
CCCCCHHHHHHHCCCHHEECCCHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]