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The map label for this gene is ydhF [H]

Identifier: 225861305

GI number: 225861305

Start: 1341841

End: 1342767

Strand: Reverse

Name: ydhF [H]

Synonym: SPT_1408

Alternate gene names: 225861305

Gene position: 1342767-1341841 (Counterclockwise)

Preceding gene: 225861306

Following gene: 225861304

Centisome position: 63.57

GC content: 36.25

Gene sequence:

>927_bases
ATGAGATACATAACTCTTGGTCAAGATGACAAAGAATTATCAGAAATTGTTCTCGGAATGATGAGAATAAAAGATAAATC
TGTAAAAGAAGTTGAAGAGCTTGTAGAAACAGCACTTTCTGTTGGAATCAATGCCTTCGACTTGGCTGATATTTATGGTC
GTGGTCGTTGTGAAGAACTGTTAGGTCTTGTCCTAAAAAATCGTCCAGATTTAAGAGAAAAGATGTGGATTCAGTCCAAA
TGTGGCATTCGCATTGAAGAATTTACCTATTTTGATTTTTCTAAGGACTATATTATAAAATCAGTAGACGGTATTTTGCA
AAGATTGAAGATTGATCATCTAGATAGCTTGCTCCTTCATCGACCAGATGCTTTGATGGAATCTGACCAAGTAGCAGAAG
CCTTTGATCTCCTTTATAAACAAGGTAAAGTTCGAGATTTTGGAGTTTCTAATCAAAATCCTATGATGATGGAGTTGCTT
AAAAAAGATGTCAAGCAGCCGTTAGCTGTTAATCAGCTACAATTGAGTGCGGCTTTTACTCCAGGATTTGAATCAGCTTT
TCATGTTAATATGGAAGATAGTCAAGCAGCTATGCGAGATGGCAGCATTTTTGAATATTGCCAATTACACGATGTGGTCA
TTCAAGCATGGTCTGTCTTACAATTCGGGTATTTTAAAGGAAATTTTGTTGGAAATGAGAAATTTCAAGCTTTAAATCAA
GTACTTGATCGTTTAGCTATTAAATATGGAGTAACCTCTTCAACTATTGCCATTTCTTGGATATTGCGTTATCCAGCAAA
AATGCAGGCAGTCGTAGGTACAACAAATCCTAAGCACTTGAGAGAAGTTAGCCGAGCGGCAAACTTTAGCTTAACAAGAA
AAGAATGGTATGAAATTTATCTTGCTGCAGGGAATAATTTGCCGTAA

Upstream 100 bases:

>100_bases
AGAAGATAAAATGGAGTGAAGTATAGTCAAAAAGTCGTTGCAAAGCGGTTTTTTGTTATAATGAAGGGAAGAATGTTAGA
AATTAAAGGAGAAAAATTTG

Downstream 100 bases:

>100_bases
GTAGTAGCAGGTTTGAATAACTCACATTCAAAAAGCCGTATAAAGCGGTTTTTTGCTATAATTAAATGAAGAATGTAGAA
TTAAAGGAGAAAAACATGAC

Product: oxidoreductase, aldo/keto reductase family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MRYITLGQDDKELSEIVLGMMRIKDKSVKEVEELVETALSVGINAFDLADIYGRGRCEELLGLVLKNRPDLREKMWIQSK
CGIRIEEFTYFDFSKDYIIKSVDGILQRLKIDHLDSLLLHRPDALMESDQVAEAFDLLYKQGKVRDFGVSNQNPMMMELL
KKDVKQPLAVNQLQLSAAFTPGFESAFHVNMEDSQAAMRDGSIFEYCQLHDVVIQAWSVLQFGYFKGNFVGNEKFQALNQ
VLDRLAIKYGVTSSTIAISWILRYPAKMQAVVGTTNPKHLREVSRAANFSLTRKEWYEIYLAAGNNLP

Sequences:

>Translated_308_residues
MRYITLGQDDKELSEIVLGMMRIKDKSVKEVEELVETALSVGINAFDLADIYGRGRCEELLGLVLKNRPDLREKMWIQSK
CGIRIEEFTYFDFSKDYIIKSVDGILQRLKIDHLDSLLLHRPDALMESDQVAEAFDLLYKQGKVRDFGVSNQNPMMMELL
KKDVKQPLAVNQLQLSAAFTPGFESAFHVNMEDSQAAMRDGSIFEYCQLHDVVIQAWSVLQFGYFKGNFVGNEKFQALNQ
VLDRLAIKYGVTSSTIAISWILRYPAKMQAVVGTTNPKHLREVSRAANFSLTRKEWYEIYLAAGNNLP
>Mature_308_residues
MRYITLGQDDKELSEIVLGMMRIKDKSVKEVEELVETALSVGINAFDLADIYGRGRCEELLGLVLKNRPDLREKMWIQSK
CGIRIEEFTYFDFSKDYIIKSVDGILQRLKIDHLDSLLLHRPDALMESDQVAEAFDLLYKQGKVRDFGVSNQNPMMMELL
KKDVKQPLAVNQLQLSAAFTPGFESAFHVNMEDSQAAMRDGSIFEYCQLHDVVIQAWSVLQFGYFKGNFVGNEKFQALNQ
VLDRLAIKYGVTSSTIAISWILRYPAKMQAVVGTTNPKHLREVSRAANFSLTRKEWYEIYLAAGNNLP

Specific function: May function as oxidoreductase (Potential) [H]

COG id: COG4989

COG function: function code R; Predicted oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase 2 family [H]

Homologues:

Organism=Homo sapiens, GI27436964, Length=311, Percent_Identity=22.8295819935691, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI27436962, Length=311, Percent_Identity=22.8295819935691, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI27436966, Length=311, Percent_Identity=22.508038585209, Blast_Score=72, Evalue=5e-13,
Organism=Escherichia coli, GI48994888, Length=314, Percent_Identity=35.031847133758, Blast_Score=168, Evalue=3e-43,
Organism=Escherichia coli, GI87081735, Length=329, Percent_Identity=24.3161094224924, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1788070, Length=333, Percent_Identity=25.2252252252252, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1786400, Length=278, Percent_Identity=24.4604316546763, Blast_Score=67, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24646155, Length=158, Percent_Identity=32.2784810126582, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR020471
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 35165; Mature: 35165

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYITLGQDDKELSEIVLGMMRIKDKSVKEVEELVETALSVGINAFDLADIYGRGRCEEL
CEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHH
LGLVLKNRPDLREKMWIQSKCGIRIEEFTYFDFSKDYIIKSVDGILQRLKIDHLDSLLLH
HHHHHCCCCCHHHHHHHHHHCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHC
RPDALMESDQVAEAFDLLYKQGKVRDFGVSNQNPMMMELLKKDVKQPLAVNQLQLSAAFT
CCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHCCHHHHHEEEEEECC
PGFESAFHVNMEDSQAAMRDGSIFEYCQLHDVVIQAWSVLQFGYFKGNFVGNEKFQALNQ
CCCCCEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
VLDRLAIKYGVTSSTIAISWILRYPAKMQAVVGTTNPKHLREVSRAANFSLTRKEWYEIY
HHHHHHHHHCCCCHHHHHHHHHHCCHHHHHEECCCCHHHHHHHHHHHCCCCCHHHHEEEE
LAAGNNLP
EECCCCCC
>Mature Secondary Structure
MRYITLGQDDKELSEIVLGMMRIKDKSVKEVEELVETALSVGINAFDLADIYGRGRCEEL
CEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHH
LGLVLKNRPDLREKMWIQSKCGIRIEEFTYFDFSKDYIIKSVDGILQRLKIDHLDSLLLH
HHHHHCCCCCHHHHHHHHHHCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHC
RPDALMESDQVAEAFDLLYKQGKVRDFGVSNQNPMMMELLKKDVKQPLAVNQLQLSAAFT
CCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHCCHHHHHEEEEEECC
PGFESAFHVNMEDSQAAMRDGSIFEYCQLHDVVIQAWSVLQFGYFKGNFVGNEKFQALNQ
CCCCCEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
VLDRLAIKYGVTSSTIAISWILRYPAKMQAVVGTTNPKHLREVSRAANFSLTRKEWYEIY
HHHHHHHHHCCCCHHHHHHHHHHCCHHHHHEECCCCHHHHHHHHHHHCCCCCHHHHEEEE
LAAGNNLP
EECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]