| Definition | Streptococcus pneumoniae Taiwan19F-14, complete genome. |
|---|---|
| Accession | NC_012469 |
| Length | 2,112,148 |
Click here to switch to the map view.
The map label for this gene is artQ [H]
Identifier: 225861279
GI number: 225861279
Start: 1314553
End: 1315182
Strand: Reverse
Name: artQ [H]
Synonym: SPT_1378
Alternate gene names: 225861279
Gene position: 1315182-1314553 (Counterclockwise)
Preceding gene: 225861283
Following gene: 225861278
Centisome position: 62.27
GC content: 40.48
Gene sequence:
>630_bases GTGACGATTCTTATTTCTATCTGTGTTATCTTTTTGGGAACTATTTTGGGTGTTGTCTTGGCTTTTGGGCAACGTTCAAA GTTTAAACCGCTTGTTTGGTTGGCCAACTTGTACGTTTGGATTTTCCGTGGGACACCGATGATGGTTCAAATTATGATTG CCTTTGCTCTTATGCATATCAATGCTCCGACTATTCAGATTGGAATTTTAGGTGTTGATTTTTCGCGTCTGATTCCAGGG ATTTTGATTATCTCTATGAATAGTGGTGCTTATGTTTCGGAGACTGTTCGTGCCGGAATCAATGCGGTTCCAAAAGGTCA GCTAGAGGCGGCTTATTCGCTAGGGATTCGTCCTAAAAATGCGATGCGTTATGTGATTTTGCCACAAGCAGTCAAAAATA TCTTGCCAGCATTGGGGAACGAATTTATCACCATTATCAAGGACAGCTCCCTCTTATCAGCTATTGGGGTCATGGAGTTG TGGAATGGGGCTACAACAGTTTCTACAACAACCTATCTACCTTTAACACCGCTTTTATTTGCAGCATTTTATTACTTGAT TATGACCTCTATTCTGACAGTAGCCTTGAAAGCTTTTGAAAAACATATGGGACAAGGAGATAAGAAATAA
Upstream 100 bases:
>100_bases AACATGTTATAATCATACAGTATTCTATTTTAGAAAGCAGTGTGACTATGAATTTTTCTTTTTACCTAAGTATTTACCTT ATTTTAACTATGGGGCTGTT
Downstream 100 bases:
>100_bases TGACAGAAACCTTGATAAAAATTGAAAATTTACATAAATCTTTTGGAAAGAATGAAGTATTGAAGGGAATCAACCTCGAG ATTAAAAGAGGAGAAGTTGT
Product: amino acid ABC transporter, permease protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MTILISICVIFLGTILGVVLAFGQRSKFKPLVWLANLYVWIFRGTPMMVQIMIAFALMHINAPTIQIGILGVDFSRLIPG ILIISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPKNAMRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVMEL WNGATTVSTTTYLPLTPLLFAAFYYLIMTSILTVALKAFEKHMGQGDKK
Sequences:
>Translated_209_residues MTILISICVIFLGTILGVVLAFGQRSKFKPLVWLANLYVWIFRGTPMMVQIMIAFALMHINAPTIQIGILGVDFSRLIPG ILIISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPKNAMRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVMEL WNGATTVSTTTYLPLTPLLFAAFYYLIMTSILTVALKAFEKHMGQGDKK >Mature_208_residues TILISICVIFLGTILGVVLAFGQRSKFKPLVWLANLYVWIFRGTPMMVQIMIAFALMHINAPTIQIGILGVDFSRLIPGI LIISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPKNAMRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVMELW NGATTVSTTTYLPLTPLLFAAFYYLIMTSILTVALKAFEKHMGQGDKK
Specific function: Part of a binding-protein-dependent transport system for arginine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788226, Length=209, Percent_Identity=36.3636363636364, Blast_Score=136, Evalue=1e-33, Organism=Escherichia coli, GI1787087, Length=225, Percent_Identity=28, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1787030, Length=209, Percent_Identity=34.9282296650718, Blast_Score=100, Evalue=5e-23, Organism=Escherichia coli, GI1786873, Length=192, Percent_Identity=31.25, Blast_Score=100, Evalue=6e-23, Organism=Escherichia coli, GI1788645, Length=214, Percent_Identity=31.3084112149533, Blast_Score=96, Evalue=1e-21, Organism=Escherichia coli, GI1788646, Length=211, Percent_Identity=26.5402843601896, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI87082239, Length=193, Percent_Identity=30.0518134715026, Blast_Score=82, Evalue=2e-17, Organism=Escherichia coli, GI1786874, Length=202, Percent_Identity=29.2079207920792, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI48994930, Length=124, Percent_Identity=38.7096774193548, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1787086, Length=183, Percent_Identity=27.3224043715847, Blast_Score=72, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 22838; Mature: 22707
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILISICVIFLGTILGVVLAFGQRSKFKPLVWLANLYVWIFRGTPMMVQIMIAFALMHI CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC NAPTIQIGILGVDFSRLIPGILIISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPKN CCCEEEEEEEECCHHHHCCEEEEEEECCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCC AMRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVMELWNGATTVSTTTYLPLTPLLF CEEEEEEHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEEEECCHHHHHH AAFYYLIMTSILTVALKAFEKHMGQGDKK HHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TILISICVIFLGTILGVVLAFGQRSKFKPLVWLANLYVWIFRGTPMMVQIMIAFALMHI CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC NAPTIQIGILGVDFSRLIPGILIISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPKN CCCEEEEEEEECCHHHHCCEEEEEEECCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCC AMRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVMELWNGATTVSTTTYLPLTPLLF CEEEEEEHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEEEECCHHHHHH AAFYYLIMTSILTVALKAFEKHMGQGDKK HHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]