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The map label for this gene is ytsP [H]

Identifier: 225861243

GI number: 225861243

Start: 1279183

End: 1279680

Strand: Reverse

Name: ytsP [H]

Synonym: SPT_1337

Alternate gene names: 225861243

Gene position: 1279680-1279183 (Counterclockwise)

Preceding gene: 225861244

Following gene: 225861242

Centisome position: 60.59

GC content: 38.96

Gene sequence:

>498_bases
ATGTTAAAATCAGAAAAACAATCACGTTATCAAATGTTAAATGAAGAATTGTCCTTCCTATTGGAAGGCGAAACCAATGT
TTTGGCTAATCTTTCCAACGCCAGTGCTCTCATAAAATCACGTTTTCCTAATACCGTATTTGCAGGCTTTTATTTGTTCG
ATGGAAAGGAATTGGTTTTAGGCCCCTTCCAAGGAGGTGTTTCCTGCATCCGTATTGCACTAGGCAAGGGTGTTTGTGGT
GAGGCAGCTCACTTTCAGGAAACTGTTATTGTTGGAGATGTGACGACCTATCTCAACTATATTTCTTGTGATAGTCTAGC
TAAAAGTGAAATTGTGGTGCCGATGATGAAGAATGGTCAGTTACTTGGAGTTCTGGATCTGGATTCTTCAGAGATTGAGG
ATTACGATACTATGGATCGAGATTATTTGGAACAATTTGTCGCTATTTTGCTTGAAAAGACAGCATGGGACTTTACGATG
TTTGAGGAAAAATCTTAA

Upstream 100 bases:

>100_bases
GGGATTTACCCACTACAAATATTATAGAGCCCAAAATCCTTTGTTTACTAAACAAGGGATTTTTCTTTTGTCTCTGCTCC
TTTTTTGATATAATAGTTCT

Downstream 100 bases:

>100_bases
TGTATCAAGCACTTTATCGAAAATATAGAAGTCAAAACTTCTCCCAGTTAGTTGGTCAAGAAGTTGTGGCTAAGACTCTT
AAACAAGCGGTGGAGCAAGA

Product: GAF domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MLKSEKQSRYQMLNEELSFLLEGETNVLANLSNASALIKSRFPNTVFAGFYLFDGKELVLGPFQGGVSCIRIALGKGVCG
EAAHFQETVIVGDVTTYLNYISCDSLAKSEIVVPMMKNGQLLGVLDLDSSEIEDYDTMDRDYLEQFVAILLEKTAWDFTM
FEEKS

Sequences:

>Translated_165_residues
MLKSEKQSRYQMLNEELSFLLEGETNVLANLSNASALIKSRFPNTVFAGFYLFDGKELVLGPFQGGVSCIRIALGKGVCG
EAAHFQETVIVGDVTTYLNYISCDSLAKSEIVVPMMKNGQLLGVLDLDSSEIEDYDTMDRDYLEQFVAILLEKTAWDFTM
FEEKS
>Mature_165_residues
MLKSEKQSRYQMLNEELSFLLEGETNVLANLSNASALIKSRFPNTVFAGFYLFDGKELVLGPFQGGVSCIRIALGKGVCG
EAAHFQETVIVGDVTTYLNYISCDSLAKSEIVVPMMKNGQLLGVLDLDSSEIEDYDTMDRDYLEQFVAILLEKTAWDFTM
FEEKS

Specific function: Unknown

COG id: COG1956

COG function: function code T; GAF domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the free Met sulfoxide reductase family [H]

Homologues:

Organism=Escherichia coli, GI171474009, Length=145, Percent_Identity=42.0689655172414, Blast_Score=124, Evalue=5e-30,
Organism=Saccharomyces cerevisiae, GI6322781, Length=139, Percent_Identity=46.7625899280576, Blast_Score=120, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003018
- InterPro:   IPR000614 [H]

Pfam domain/function: PF01590 GAF [H]

EC number: NA

Molecular weight: Translated: 18421; Mature: 18421

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKSEKQSRYQMLNEELSFLLEGETNVLANLSNASALIKSRFPNTVFAGFYLFDGKELVL
CCCCHHHHHHHHHHHHHHEEECCCCCEEEECCHHHHHHHHCCCCCEEEEEEEECCCEEEE
GPFQGGVSCIRIALGKGVCGEAAHFQETVIVGDVTTYLNYISCDSLAKSEIVVPMMKNGQ
ECCCCCHHHHHHHHCCCCCCCCCCCHHEEEEECHHHHHHHHHHCCCCCCCEEEEEECCCC
LLGVLDLDSSEIEDYDTMDRDYLEQFVAILLEKTAWDFTMFEEKS
EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC
>Mature Secondary Structure
MLKSEKQSRYQMLNEELSFLLEGETNVLANLSNASALIKSRFPNTVFAGFYLFDGKELVL
CCCCHHHHHHHHHHHHHHEEECCCCCEEEECCHHHHHHHHCCCCCEEEEEEEECCCEEEE
GPFQGGVSCIRIALGKGVCGEAAHFQETVIVGDVTTYLNYISCDSLAKSEIVVPMMKNGQ
ECCCCCHHHHHHHHCCCCCCCCCCCHHEEEEECHHHHHHHHHHCCCCCCCEEEEEECCCC
LLGVLDLDSSEIEDYDTMDRDYLEQFVAILLEKTAWDFTMFEEKS
EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]