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The map label for this gene is sufC [C]

Identifier: 225861240

GI number: 225861240

Start: 1276386

End: 1277156

Strand: Reverse

Name: sufC [C]

Synonym: SPT_1334

Alternate gene names: 225861240

Gene position: 1277156-1276386 (Counterclockwise)

Preceding gene: 225861241

Following gene: 225861239

Centisome position: 60.47

GC content: 41.76

Gene sequence:

>771_bases
ATGTCAGTAATAGAGATCAAAGATCTTCACGTTGAGATTGAAGGAAAAGAAATTTTAAAAGGGGTTAACCTGACCCTGAA
AACAGGAGAAATTGCCGCTATCATGGGACCAAATGGTACAGGTAAATCGACTCTTTCTGCCGCTATCATGGGAAATCCAA
ACTATGAAGTAACTAAAGGTGAAGTTTTGTTTGATGGCGTAAACATCCTTGAGTTGGAAGTGGATGAGCGTGCGCGTATG
GGACTTTTCCTTGCTATGCAATACCCATCAGAAATCCCTGGAATTACCAATGCTGAGTTTCTTCGTGCCGCTATGAATGC
GGGTAAAGAAGATGATGAGAAGATTTCAGTTCGTGAGTTTATTACTAAGCTAGATGAAAAAATGGAATTGCTCAACATGA
AAGAAGAAATGGCAGAGCGTTACCTCAACGAAGGCTTCTCTGGTGGTGAGAAAAAACGCAATGAAATTCTTCAACTTTTG
ATGTTGGAGCCAACATTTGCTCTTTTGGACGAGATTGACTCAGGTCTTGATATTGACGCTCTTAAAGTTGTGTCTAAAGG
TGTCAATGCCATGCGTGGTGAAGGTTTTGGTGCTATGATCATCACTCACTACCAACGTCTTTTGAACTATATCACACCTG
ATGTGGTACACGTGATGATGGAAGGTCGTGTTGTCCTTTCTGGTGGTCCAGAATTGGCTGCGCGTTTGGAACGTGAAGGA
TACGCAAAATTAGCTGAAGAACTTGGCTACGACTACAAGGAAGAATTGTAA

Upstream 100 bases:

>100_bases
ACTAGAAAAGTATATTTATAGAATTTTTGCTCTATTTCTGGGGAAATCAGACGTTTTTCTAGTAAGTACTGTAAAAGTTT
TGAAAAAGAAAGGAACTATC

Downstream 100 bases:

>100_bases
TTCCCTCGTATCTTTTAGGAGAAGTAAATGACTAGAGAAAATATTAAACTTTTTTCAGAAATGCACGCTGAACCAAGCTG
GTTGGCTGATCTCCGTCAAA

Product: FeS assembly ATPase SufC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MSVIEIKDLHVEIEGKEILKGVNLTLKTGEIAAIMGPNGTGKSTLSAAIMGNPNYEVTKGEVLFDGVNILELEVDERARM
GLFLAMQYPSEIPGITNAEFLRAAMNAGKEDDEKISVREFITKLDEKMELLNMKEEMAERYLNEGFSGGEKKRNEILQLL
MLEPTFALLDEIDSGLDIDALKVVSKGVNAMRGEGFGAMIITHYQRLLNYITPDVVHVMMEGRVVLSGGPELAARLEREG
YAKLAEELGYDYKEEL

Sequences:

>Translated_256_residues
MSVIEIKDLHVEIEGKEILKGVNLTLKTGEIAAIMGPNGTGKSTLSAAIMGNPNYEVTKGEVLFDGVNILELEVDERARM
GLFLAMQYPSEIPGITNAEFLRAAMNAGKEDDEKISVREFITKLDEKMELLNMKEEMAERYLNEGFSGGEKKRNEILQLL
MLEPTFALLDEIDSGLDIDALKVVSKGVNAMRGEGFGAMIITHYQRLLNYITPDVVHVMMEGRVVLSGGPELAARLEREG
YAKLAEELGYDYKEEL
>Mature_255_residues
SVIEIKDLHVEIEGKEILKGVNLTLKTGEIAAIMGPNGTGKSTLSAAIMGNPNYEVTKGEVLFDGVNILELEVDERARMG
LFLAMQYPSEIPGITNAEFLRAAMNAGKEDDEKISVREFITKLDEKMELLNMKEEMAERYLNEGFSGGEKKRNEILQLLM
LEPTFALLDEIDSGLDIDALKVVSKGVNAMRGEGFGAMIITHYQRLLNYITPDVVHVMMEGRVVLSGGPELAARLEREGY
AKLAEELGYDYKEEL

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI148612844, Length=234, Percent_Identity=29.9145299145299, Blast_Score=78, Evalue=9e-15,
Organism=Homo sapiens, GI255708477, Length=234, Percent_Identity=29.9145299145299, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI42741659, Length=214, Percent_Identity=29.4392523364486, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI4505771, Length=260, Percent_Identity=28.0769230769231, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI9961250, Length=260, Percent_Identity=28.0769230769231, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI9961252, Length=260, Percent_Identity=28.0769230769231, Blast_Score=69, Evalue=5e-12,
Organism=Escherichia coli, GI1787972, Length=247, Percent_Identity=51.8218623481781, Blast_Score=255, Evalue=2e-69,
Organism=Escherichia coli, GI1787029, Length=236, Percent_Identity=30.0847457627119, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI1789593, Length=230, Percent_Identity=26.9565217391304, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1788761, Length=233, Percent_Identity=26.1802575107296, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1787500, Length=241, Percent_Identity=31.5352697095436, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1788225, Length=237, Percent_Identity=28.2700421940928, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1787759, Length=238, Percent_Identity=28.1512605042017, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1787370, Length=220, Percent_Identity=26.3636363636364, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1789672, Length=220, Percent_Identity=26.8181818181818, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI87081782, Length=234, Percent_Identity=28.2051282051282, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1790525, Length=215, Percent_Identity=30.6976744186047, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1788165, Length=237, Percent_Identity=25.7383966244726, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1786653, Length=229, Percent_Identity=25.3275109170306, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI87081791, Length=232, Percent_Identity=26.7241379310345, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1790162, Length=212, Percent_Identity=25.9433962264151, Blast_Score=62, Evalue=5e-11,
Organism=Escherichia coli, GI1789891, Length=215, Percent_Identity=24.1860465116279, Blast_Score=62, Evalue=5e-11,
Organism=Escherichia coli, GI87081709, Length=233, Percent_Identity=20.1716738197425, Blast_Score=61, Evalue=7e-11,
Organism=Escherichia coli, GI1790739, Length=238, Percent_Identity=26.0504201680672, Blast_Score=61, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI193209708, Length=238, Percent_Identity=28.5714285714286, Blast_Score=81, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI212646699, Length=254, Percent_Identity=29.1338582677165, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17541710, Length=242, Percent_Identity=29.3388429752066, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI193202349, Length=234, Percent_Identity=29.4871794871795, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71984940, Length=267, Percent_Identity=29.2134831460674, Blast_Score=70, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI17565938, Length=218, Percent_Identity=27.5229357798165, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17543740, Length=190, Percent_Identity=27.8947368421053, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI71992290, Length=258, Percent_Identity=29.0697674418605, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17567265, Length=238, Percent_Identity=30.2521008403361, Blast_Score=66, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6324498, Length=236, Percent_Identity=27.9661016949153, Blast_Score=69, Evalue=9e-13,
Organism=Saccharomyces cerevisiae, GI6323217, Length=239, Percent_Identity=26.7782426778243, Blast_Score=67, Evalue=2e-12,
Organism=Drosophila melanogaster, GI281363262, Length=221, Percent_Identity=28.5067873303167, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24653245, Length=221, Percent_Identity=28.5067873303167, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI85726357, Length=225, Percent_Identity=28.4444444444444, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24581191, Length=218, Percent_Identity=28.8990825688073, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24581189, Length=218, Percent_Identity=28.8990825688073, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24581193, Length=218, Percent_Identity=28.8990825688073, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24581195, Length=218, Percent_Identity=28.8990825688073, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI21357907, Length=240, Percent_Identity=29.1666666666667, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 28406; Mature: 28275

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: PS00014 ER_TARGET ; PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVIEIKDLHVEIEGKEILKGVNLTLKTGEIAAIMGPNGTGKSTLSAAIMGNPNYEVTKG
CCEEEEEEEEEEECHHHHHCCCCEEEECCCEEEEECCCCCCCHHEEEEEECCCCCEEECC
EVLFDGVNILELEVDERARMGLFLAMQYPSEIPGITNAEFLRAAMNAGKEDDEKISVREF
CEEECCCEEEEEEECCHHHCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHH
ITKLDEKMELLNMKEEMAERYLNEGFSGGEKKRNEILQLLMLEPTFALLDEIDSGLDIDA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHH
LKVVSKGVNAMRGEGFGAMIITHYQRLLNYITPDVVHVMMEGRVVLSGGPELAARLEREG
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHCCEEEEECCHHHHHHHHHHH
YAKLAEELGYDYKEEL
HHHHHHHHCCCHHHCC
>Mature Secondary Structure 
SVIEIKDLHVEIEGKEILKGVNLTLKTGEIAAIMGPNGTGKSTLSAAIMGNPNYEVTKG
CEEEEEEEEEEECHHHHHCCCCEEEECCCEEEEECCCCCCCHHEEEEEECCCCCEEECC
EVLFDGVNILELEVDERARMGLFLAMQYPSEIPGITNAEFLRAAMNAGKEDDEKISVREF
CEEECCCEEEEEEECCHHHCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHH
ITKLDEKMELLNMKEEMAERYLNEGFSGGEKKRNEILQLLMLEPTFALLDEIDSGLDIDA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHH
LKVVSKGVNAMRGEGFGAMIITHYQRLLNYITPDVVHVMMEGRVVLSGGPELAARLEREG
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHCCEEEEECCHHHHHHHHHHH
YAKLAEELGYDYKEEL
HHHHHHHHCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12122206; 12799345 [H]