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The map label for this gene is comB [H]

Identifier: 225860546

GI number: 225860546

Start: 533154

End: 534515

Strand: Reverse

Name: comB [H]

Synonym: SPT_0565

Alternate gene names: 225860546

Gene position: 534515-533154 (Counterclockwise)

Preceding gene: 225860566

Following gene: 225860545

Centisome position: 25.31

GC content: 36.42

Gene sequence:

>1362_bases
ATGAATCCTAATCTTTTTAGAAGCGTCGAGTTTTATCAGAGACGTTACCATAACTATGCGACAGTATTAATCATACCTCT
TTCATTATTATTTACTTTCATCTTGATTTTCTCCCTTGTTGCCACAAAAGAAATTACTGTTACTTCCCAAGGGGAAATCA
CCCCTACAAGTGTCATTGCATCTATTCAGTCGACCAGTGATAATCCTATCCTTGCTAATCATTTAGTGGCAAATCAAGTA
GTTGAGAAAGGTGACTTACTCATCAAATACTCTGAAACAATGGAAGAGAGTCAGAAAACTGCCTTAGAAACTCAATTACA
AAGACTTGAGAAGCAAAAAGAAGGACTTGGAATCTTGAAACAAAGCTTAGAAAAAGCGACTGATCTTTTTTCTAGCGAGG
ATGAGTTTGGCTACCATAATACTTTTATGAATTTTACTAAACAATCCCATGATATTGAACTGGGTATCTCAAAGACTAAC
ACTGAAGTTTCAAATCAAGCTAATCTTACCAATAGCAGTTCATCAGCCATCGAACAAGAAATTACAAAAGTTCAACAACA
AATTGGAGAATATCAAGAGCTGAGAGATACTATCGTAAATAAAAGAGCTCGCTTACCAACTGGCAATCCGCACCAGTCAA
TTTTAAATCGTTATCTTATAGCCTCTCAAGAACAAACACAAGGAACGGCAGAGGAGCCATTTTTATCTCAAATTAATCAA
AGTATTGCAGGTCTGGAATCATCTATCGCAAGCCTCAAAATTCAGCAAGCTGGTATCGGAAGTGTAGCAACTTATGATAA
TAGTTTAGCAACCAAAATTGAAGTACTCCGCACTCAGTTTTTACAAACAGCCTCACAGCAACAACTAACCGTGGAGAATC
AATTAACAGAATTAAAAGTACAACTAGATCAAGCAACGCAGCGCTTAGGAAACAATACCTTAACCGCTCCAAGTAAAGGT
ATCGTTCATCTGAACAGCGAATTTGAAGGTAAAAATAGAATTCCAACTGGTACAGAAATTGCTCAAATATTCCCTGTCAT
CACAGATACAAGAGAAGTACTAATCACTTACTACGTATCTTCTGACTATCTACCTCTACTAGATAAAGGACAAACTGTAA
GATTAAAACTGGAGAAGATTGGAAATCACGGCACCACCATCATCGGCCAACTTCAGACAATTGATCAAACTCCTACCAGA
ACAGAGCAAGGTAATCTCTTTAAATTAACCGCTCTTGCAAAACTATCTAATGAGGATAGTAAACTCATCCAATATGGCTT
ACAAGGTCGCGTCACTAGTGTAACTGCAAAGAAAACATATTTTGATTATTTCAAAGATAAAATTTTAACCCATTCTGATT
AA

Upstream 100 bases:

>100_bases
GTTCTTGACCAGGGGAAAATCATTGAAGTTGGTAGTCACCAAGAGTTAATGCAGGCGCAAGGCTTCTACCATCATCTGTT
CAATAAATAAGGAGAATGTC

Downstream 100 bases:

>100_bases
TTTTCAGATAACACTCTATAACTATTTATTATCTTATCAAAAAGGAGAATCATAACATGGATAAGAAACAAAACCTAACT
TCATTTCAAGAACTAACAAC

Product: BlpC ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 453; Mature: 453

Protein sequence:

>453_residues
MNPNLFRSVEFYQRRYHNYATVLIIPLSLLFTFILIFSLVATKEITVTSQGEITPTSVIASIQSTSDNPILANHLVANQV
VEKGDLLIKYSETMEESQKTALETQLQRLEKQKEGLGILKQSLEKATDLFSSEDEFGYHNTFMNFTKQSHDIELGISKTN
TEVSNQANLTNSSSSAIEQEITKVQQQIGEYQELRDTIVNKRARLPTGNPHQSILNRYLIASQEQTQGTAEEPFLSQINQ
SIAGLESSIASLKIQQAGIGSVATYDNSLATKIEVLRTQFLQTASQQQLTVENQLTELKVQLDQATQRLGNNTLTAPSKG
IVHLNSEFEGKNRIPTGTEIAQIFPVITDTREVLITYYVSSDYLPLLDKGQTVRLKLEKIGNHGTTIIGQLQTIDQTPTR
TEQGNLFKLTALAKLSNEDSKLIQYGLQGRVTSVTAKKTYFDYFKDKILTHSD

Sequences:

>Translated_453_residues
MNPNLFRSVEFYQRRYHNYATVLIIPLSLLFTFILIFSLVATKEITVTSQGEITPTSVIASIQSTSDNPILANHLVANQV
VEKGDLLIKYSETMEESQKTALETQLQRLEKQKEGLGILKQSLEKATDLFSSEDEFGYHNTFMNFTKQSHDIELGISKTN
TEVSNQANLTNSSSSAIEQEITKVQQQIGEYQELRDTIVNKRARLPTGNPHQSILNRYLIASQEQTQGTAEEPFLSQINQ
SIAGLESSIASLKIQQAGIGSVATYDNSLATKIEVLRTQFLQTASQQQLTVENQLTELKVQLDQATQRLGNNTLTAPSKG
IVHLNSEFEGKNRIPTGTEIAQIFPVITDTREVLITYYVSSDYLPLLDKGQTVRLKLEKIGNHGTTIIGQLQTIDQTPTR
TEQGNLFKLTALAKLSNEDSKLIQYGLQGRVTSVTAKKTYFDYFKDKILTHSD
>Mature_453_residues
MNPNLFRSVEFYQRRYHNYATVLIIPLSLLFTFILIFSLVATKEITVTSQGEITPTSVIASIQSTSDNPILANHLVANQV
VEKGDLLIKYSETMEESQKTALETQLQRLEKQKEGLGILKQSLEKATDLFSSEDEFGYHNTFMNFTKQSHDIELGISKTN
TEVSNQANLTNSSSSAIEQEITKVQQQIGEYQELRDTIVNKRARLPTGNPHQSILNRYLIASQEQTQGTAEEPFLSQINQ
SIAGLESSIASLKIQQAGIGSVATYDNSLATKIEVLRTQFLQTASQQQLTVENQLTELKVQLDQATQRLGNNTLTAPSKG
IVHLNSEFEGKNRIPTGTEIAQIFPVITDTREVLITYYVSSDYLPLLDKGQTVRLKLEKIGNHGTTIIGQLQTIDQTPTR
TEQGNLFKLTALAKLSNEDSKLIQYGLQGRVTSVTAKKTYFDYFKDKILTHSD

Specific function: Required for induction of competence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005696 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50645; Mature: 50645

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPNLFRSVEFYQRRYHNYATVLIIPLSLLFTFILIFSLVATKEITVTSQGEITPTSVIA
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHH
SIQSTSDNPILANHLVANQVVEKGDLLIKYSETMEESQKTALETQLQRLEKQKEGLGILK
HHHCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSLEKATDLFSSEDEFGYHNTFMNFTKQSHDIELGISKTNTEVSNQANLTNSSSSAIEQE
HHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHH
ITKVQQQIGEYQELRDTIVNKRARLPTGNPHQSILNRYLIASQEQTQGTAEEPFLSQINQ
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHH
SIAGLESSIASLKIQQAGIGSVATYDNSLATKIEVLRTQFLQTASQQQLTVENQLTELKV
HHHHHHHHHHHHEECCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLDQATQRLGNNTLTAPSKGIVHLNSEFEGKNRIPTGTEIAQIFPVITDTREVLITYYVS
HHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEC
SDYLPLLDKGQTVRLKLEKIGNHGTTIIGQLQTIDQTPTRTEQGNLFKLTALAKLSNEDS
CCCCCCCCCCCEEEEEEEECCCCCCEEEEEHHHCCCCCCCCCCCCEEEEEEHHHHCCCHH
KLIQYGLQGRVTSVTAKKTYFDYFKDKILTHSD
HHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNPNLFRSVEFYQRRYHNYATVLIIPLSLLFTFILIFSLVATKEITVTSQGEITPTSVIA
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHH
SIQSTSDNPILANHLVANQVVEKGDLLIKYSETMEESQKTALETQLQRLEKQKEGLGILK
HHHCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSLEKATDLFSSEDEFGYHNTFMNFTKQSHDIELGISKTNTEVSNQANLTNSSSSAIEQE
HHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHH
ITKVQQQIGEYQELRDTIVNKRARLPTGNPHQSILNRYLIASQEQTQGTAEEPFLSQINQ
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHH
SIAGLESSIASLKIQQAGIGSVATYDNSLATKIEVLRTQFLQTASQQQLTVENQLTELKV
HHHHHHHHHHHHEECCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLDQATQRLGNNTLTAPSKGIVHLNSEFEGKNRIPTGTEIAQIFPVITDTREVLITYYVS
HHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEC
SDYLPLLDKGQTVRLKLEKIGNHGTTIIGQLQTIDQTPTRTEQGNLFKLTALAKLSNEDS
CCCCCCCCCCCEEEEEEEECCCCCCEEEEEHHHCCCCCCCCCCCCEEEEEEHHHHCCCHH
KLIQYGLQGRVTSVTAKKTYFDYFKDKILTHSD
HHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7883181; 11463916; 1987129; 8407811 [H]