| Definition | Streptococcus pneumoniae Taiwan19F-14, complete genome. |
|---|---|
| Accession | NC_012469 |
| Length | 2,112,148 |
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The map label for this gene is 225860215
Identifier: 225860215
GI number: 225860215
Start: 196296
End: 196979
Strand: Reverse
Name: 225860215
Synonym: SPT_0220
Alternate gene names: NA
Gene position: 196979-196296 (Counterclockwise)
Preceding gene: 225860216
Following gene: 225860214
Centisome position: 9.33
GC content: 42.84
Gene sequence:
>684_bases ATGTCTCAAATTGATCTACAAAAATTAACTAAGAAAAACCAAGAGTTTGTCCACATTGCTACCCAACAATTCATCAAAGA TGGGAAAACAGACGCTGAAATCCAGACTATTTTTGAGGAAGTCATTCCCCAAATCCTTGAGGAGCAATCTAAAGGTACAA CTGCCCGTTCCCTATACGGCGCACCAACTCATTGGGCTCATAGCTTCACTGTCAAAGAGCAGTACGAAAAAGAGCATCCA AAAGAAAATGATGATCCAAAACTGATGATTATGGACTCAGCTCTTTTCATCACTAGCCTCTTTGCCCTTGTCAGCGCCCT CACAACCTTCTTTGCGGCAGATCAAGCTTTCGGCTATGGATTGATTACTCTTCTATTAGTTGGACTGGTTGGTGGATTTG CCTTCTACTTGATGTACTACTTTGTTTACCAATACTATGGACCAGATATGGATCGCAGTCAACGTCCACCTTTCTGGAAA TCTGTACTAGTTATCCTAGCTTCTATGTTCCTTTGGTTGCTTGTCTTCTTTGCAACAAGCTTCCTACCAGCTAGCCTTAA CCCAGTACTGGATCCATTGCCACTAGCTATTATTGGAGCAGCCCTCCTAGCCCTTCGCTTCTATCTCAAGAAACGCTTGA ATATCCGTAGTGCAAGTGCAGGACCAACACGCTATCAAGAATAA
Upstream 100 bases:
>100_bases AGCCAAATGCCTTCTGGTTAATCGTCTTTATCGCCTTTGCTATGAGTGTCTCGCTCACTCTCTATCTCATCCATAAAAAA TGGTTCTAAGAGGAGTTCCT
Downstream 100 bases:
>100_bases GAAAACGATAAAAGCAACTGCAGGTGCGGTTGCTTTTTCACTTACTTTTTTGAGTTGTACTCAATGAAAATCAAAGAGCA AACTAGGAAGCTAGCTGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MSQIDLQKLTKKNQEFVHIATQQFIKDGKTDAEIQTIFEEVIPQILEEQSKGTTARSLYGAPTHWAHSFTVKEQYEKEHP KENDDPKLMIMDSALFITSLFALVSALTTFFAADQAFGYGLITLLLVGLVGGFAFYLMYYFVYQYYGPDMDRSQRPPFWK SVLVILASMFLWLLVFFATSFLPASLNPVLDPLPLAIIGAALLALRFYLKKRLNIRSASAGPTRYQE
Sequences:
>Translated_227_residues MSQIDLQKLTKKNQEFVHIATQQFIKDGKTDAEIQTIFEEVIPQILEEQSKGTTARSLYGAPTHWAHSFTVKEQYEKEHP KENDDPKLMIMDSALFITSLFALVSALTTFFAADQAFGYGLITLLLVGLVGGFAFYLMYYFVYQYYGPDMDRSQRPPFWK SVLVILASMFLWLLVFFATSFLPASLNPVLDPLPLAIIGAALLALRFYLKKRLNIRSASAGPTRYQE >Mature_226_residues SQIDLQKLTKKNQEFVHIATQQFIKDGKTDAEIQTIFEEVIPQILEEQSKGTTARSLYGAPTHWAHSFTVKEQYEKEHPK ENDDPKLMIMDSALFITSLFALVSALTTFFAADQAFGYGLITLLLVGLVGGFAFYLMYYFVYQYYGPDMDRSQRPPFWKS VLVILASMFLWLLVFFATSFLPASLNPVLDPLPLAIIGAALLALRFYLKKRLNIRSASAGPTRYQE
Specific function: Unknown
COG id: COG4858
COG function: function code S; Uncharacterized membrane-bound protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25799; Mature: 25668
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQIDLQKLTKKNQEFVHIATQQFIKDGKTDAEIQTIFEEVIPQILEEQSKGTTARSLYG CCCCHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC APTHWAHSFTVKEQYEKEHPKENDDPKLMIMDSALFITSLFALVSALTTFFAADQAFGYG CCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LITLLLVGLVGGFAFYLMYYFVYQYYGPDMDRSQRPPFWKSVLVILASMFLWLLVFFATS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH FLPASLNPVLDPLPLAIIGAALLALRFYLKKRLNIRSASAGPTRYQE HCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure SQIDLQKLTKKNQEFVHIATQQFIKDGKTDAEIQTIFEEVIPQILEEQSKGTTARSLYG CCCHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC APTHWAHSFTVKEQYEKEHPKENDDPKLMIMDSALFITSLFALVSALTTFFAADQAFGYG CCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LITLLLVGLVGGFAFYLMYYFVYQYYGPDMDRSQRPPFWKSVLVILASMFLWLLVFFATS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH FLPASLNPVLDPLPLAIIGAALLALRFYLKKRLNIRSASAGPTRYQE HCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA