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The map label for this gene is lytB [H]

Identifier: 225859909

GI number: 225859909

Start: 2069238

End: 2071163

Strand: Reverse

Name: lytB [H]

Synonym: SP70585_2262

Alternate gene names: 225859909

Gene position: 2071163-2069238 (Counterclockwise)

Preceding gene: 225859913

Following gene: 225859904

Centisome position: 94.8

GC content: 32.24

Gene sequence:

>1926_bases
ATGAAAAAAACTACAATATTATCATTAACTACAGCTGCGGTTATTTTAGCAGCATATGTCCCTAATGAACCAATCCTAGC
AGATACTCCTAGTTCGGAAGTAATCAAAGAGACTAAAGTTGGAAGTATTATTCAACAAAATAATATCAAATATAAGGTTC
TAACTGTAGAAGGTAACATAGGAACTGTTCAAGTGGGTAATGGAGTTACTCCTGTAGAGTTTGAAGCTGGTCAAGATGGA
AAACCATTCACGATTCCTACAAAAATCACAGTAGGTGATAAAGTATTTACCGTTACTGAAGTAGCTAGTCAAGCTTTTAG
TTATTATCCAGATGAAACAGGTAGAATTGTCTACTATCCTAGCTCTATTACTATCCCATCAAGCATAAAAAAAATACAAA
AAAAAGGCTTCCATGGAAGTAAAGCTAAAACTATTATTTTTGACAAAGGCAGTCAGCTGGAGAAAATTGAAGATAGAGCT
TTTGATTTTTCTGAATTAGAAGAGATTGAATTGCCTGCATCTCTAGAATATATTGGAACAAGTGCATTTTCTTTTAGTCA
AAAATTGAAAAAGCTAACCTTTTCCTCAAGTTCAAAATTAGAATTAATATCACATGAGGCTTTTGCTAATTTATCAAATT
TAGAGAAACTAACATTACCAAAATCGGTTAAAACATTAGGAAGTAATCTATTTAGACTCACTACTAGCTTAAAACATGTT
GATGTTGAAGAAGGAAATGAATCGTTTGCCTCAGTTGATGGTGTTTTGTTTTCAAAAGATAAAACTCAATTAATTTATTA
TCCAAGTCAAAAAAATGACGAAAGTTATAAAACGCCTAAGGAGACAAAAGAACTTGCATCATATTCGTTTAATAAAAATT
CTTACTTGAAAAAACTCGAATTGAATGAAGGTTTAGAAAAAATCGGTACTTTTGCATTTGCGGATGCGATTAAACTTGAA
GAAATTAGCTTACCAAATAGTTTAGAAACTATTGAACGTTTAGCCTTTTACGGTAATTTAGAATTAAAAGAACTTATATT
ACCAGATAATGTTAAAAATTTTGGTAAACACGTTATGAACGGTTTACCAAAATTAAAAAGTTTAACAATTGGTAATAATA
TCAACTCATTGCCGTCCTTCTTCCTAAGTGGCGTCTTAGATTCATTAAAGGAAATTCATATTAAGAATAAAAGTACAGAG
TTTTCTGTGAAAAAAGATACATTTGCAATTCCTGAAACTGTTAAGTTCTATGTAACATCAGAACATATAAAAGATGTTCT
TAAATCAAATTTATCTACTAGTAATGATATCATTGTTGAAAAAGTAGATAATATAAAACAAGAAACTGATGTAGCTAAAC
CTAAAAAGAATTCTAATCAGGGAGTAGTTGGTTGGGTTAAAGACAAAGGTTTATGGTATTACTTAAACGAATCAGGTTCA
ATGGCTACTGGTTGGGTTAAAGACAAAGGTTTATGGTATTACTTAAACGAATCAGGTTCAATGGCTACTGGTTGGGTTAA
AGACAAAGGCTTATGGTATTACTTAAATGAATCAGGTTCAATGGCTACTGGTTGGGTTAAAGACAAAGGCTTATGGTATT
ACTTAAATGAATCAGGTTCAATGGCTACTGGTTGGGTTAAAGACAAAGGCTTATGGTATTACTTAAATGAATCAGGTTCA
ATGGCTACTGGTTGGGTTAAAGACAAAGGCTTATGGTATTACTTAAATGAATCAGGTTCAATGGCTACTGGTTGGGTTAA
AGACAAAGGCTTATGGTATTACTTAAACGAATCAGGTTCAATGGCTACTGGTTGGTTTACAGTTTCTGGTAAATGGTACT
ATACCTATAATTCAGGAGATTTATTAGTAAACACGACTACACCCGATGGCTATCGAGTCAATGCTAACGGTGAGTGGGTA
GGATAG

Upstream 100 bases:

>100_bases
CTATTCTACTAGATAATGATTGAATAAAACTTTTTATAACAACGGCTAGCAAAGTTATAATTTTATATCTATTAGAAAAT
AAATATGTAAGGAAATTTAA

Downstream 100 bases:

>100_bases
GTATCCATTAGCTAAATCTAATCATTCTGAACTAAAAAATCTTCTTACATATGTAGGAAGATTTTTTGGATTCTTAAAAC
TAGTTTAAAAGACTACGCTA

Product: choline binding protein PcpA

Products: NA

Alternate protein names: Murein hydrolase [H]

Number of amino acids: Translated: 641; Mature: 641

Protein sequence:

>641_residues
MKKTTILSLTTAAVILAAYVPNEPILADTPSSEVIKETKVGSIIQQNNIKYKVLTVEGNIGTVQVGNGVTPVEFEAGQDG
KPFTIPTKITVGDKVFTVTEVASQAFSYYPDETGRIVYYPSSITIPSSIKKIQKKGFHGSKAKTIIFDKGSQLEKIEDRA
FDFSELEEIELPASLEYIGTSAFSFSQKLKKLTFSSSSKLELISHEAFANLSNLEKLTLPKSVKTLGSNLFRLTTSLKHV
DVEEGNESFASVDGVLFSKDKTQLIYYPSQKNDESYKTPKETKELASYSFNKNSYLKKLELNEGLEKIGTFAFADAIKLE
EISLPNSLETIERLAFYGNLELKELILPDNVKNFGKHVMNGLPKLKSLTIGNNINSLPSFFLSGVLDSLKEIHIKNKSTE
FSVKKDTFAIPETVKFYVTSEHIKDVLKSNLSTSNDIIVEKVDNIKQETDVAKPKKNSNQGVVGWVKDKGLWYYLNESGS
MATGWVKDKGLWYYLNESGSMATGWVKDKGLWYYLNESGSMATGWVKDKGLWYYLNESGSMATGWVKDKGLWYYLNESGS
MATGWVKDKGLWYYLNESGSMATGWVKDKGLWYYLNESGSMATGWFTVSGKWYYTYNSGDLLVNTTTPDGYRVNANGEWV
G

Sequences:

>Translated_641_residues
MKKTTILSLTTAAVILAAYVPNEPILADTPSSEVIKETKVGSIIQQNNIKYKVLTVEGNIGTVQVGNGVTPVEFEAGQDG
KPFTIPTKITVGDKVFTVTEVASQAFSYYPDETGRIVYYPSSITIPSSIKKIQKKGFHGSKAKTIIFDKGSQLEKIEDRA
FDFSELEEIELPASLEYIGTSAFSFSQKLKKLTFSSSSKLELISHEAFANLSNLEKLTLPKSVKTLGSNLFRLTTSLKHV
DVEEGNESFASVDGVLFSKDKTQLIYYPSQKNDESYKTPKETKELASYSFNKNSYLKKLELNEGLEKIGTFAFADAIKLE
EISLPNSLETIERLAFYGNLELKELILPDNVKNFGKHVMNGLPKLKSLTIGNNINSLPSFFLSGVLDSLKEIHIKNKSTE
FSVKKDTFAIPETVKFYVTSEHIKDVLKSNLSTSNDIIVEKVDNIKQETDVAKPKKNSNQGVVGWVKDKGLWYYLNESGS
MATGWVKDKGLWYYLNESGSMATGWVKDKGLWYYLNESGSMATGWVKDKGLWYYLNESGSMATGWVKDKGLWYYLNESGS
MATGWVKDKGLWYYLNESGSMATGWVKDKGLWYYLNESGSMATGWFTVSGKWYYTYNSGDLLVNTTTPDGYRVNANGEWV
G
>Mature_641_residues
MKKTTILSLTTAAVILAAYVPNEPILADTPSSEVIKETKVGSIIQQNNIKYKVLTVEGNIGTVQVGNGVTPVEFEAGQDG
KPFTIPTKITVGDKVFTVTEVASQAFSYYPDETGRIVYYPSSITIPSSIKKIQKKGFHGSKAKTIIFDKGSQLEKIEDRA
FDFSELEEIELPASLEYIGTSAFSFSQKLKKLTFSSSSKLELISHEAFANLSNLEKLTLPKSVKTLGSNLFRLTTSLKHV
DVEEGNESFASVDGVLFSKDKTQLIYYPSQKNDESYKTPKETKELASYSFNKNSYLKKLELNEGLEKIGTFAFADAIKLE
EISLPNSLETIERLAFYGNLELKELILPDNVKNFGKHVMNGLPKLKSLTIGNNINSLPSFFLSGVLDSLKEIHIKNKSTE
FSVKKDTFAIPETVKFYVTSEHIKDVLKSNLSTSNDIIVEKVDNIKQETDVAKPKKNSNQGVVGWVKDKGLWYYLNESGS
MATGWVKDKGLWYYLNESGSMATGWVKDKGLWYYLNESGSMATGWVKDKGLWYYLNESGSMATGWVKDKGLWYYLNESGS
MATGWVKDKGLWYYLNESGSMATGWVKDKGLWYYLNESGSMATGWFTVSGKWYYTYNSGDLLVNTTTPDGYRVNANGEWV
G

Specific function: Plays an important role in cell wall degradation and cell separation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 13 cell wall-binding repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018337
- InterPro:   IPR013338
- InterPro:   IPR002901 [H]

Pfam domain/function: PF01473 CW_binding_1; PF01832 Glucosaminidase [H]

EC number: =3.2.1.96 [H]

Molecular weight: Translated: 71574; Mature: 71574

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTTILSLTTAAVILAAYVPNEPILADTPSSEVIKETKVGSIIQQNNIKYKVLTVEGNI
CCCEEEEEHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHCCCEECCCCEEEEEEEECCE
GTVQVGNGVTPVEFEAGQDGKPFTIPTKITVGDKVFTVTEVASQAFSYYPDETGRIVYYP
EEEEECCCCCCEEEECCCCCCCEEEEEEEEECCEEEEHHHHHHHHHHCCCCCCCEEEEEC
SSITIPSSIKKIQKKGFHGSKAKTIIFDKGSQLEKIEDRAFDFSELEEIELPASLEYIGT
CCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHCCCHHHHHHCCCCCCCHHHCC
SAFSFSQKLKKLTFSSSSKLELISHEAFANLSNLEKLTLPKSVKTLGSNLFRLTTSLKHV
CHHHHHHHHHHHHCCCCCCEEEEHHHHHHCHHCCHHHCCCHHHHHHHHHHEEEHHHHEEE
DVEEGNESFASVDGVLFSKDKTQLIYYPSQKNDESYKTPKETKELASYSFNKNSYLKKLE
ECCCCCCCHHHCCCEEEECCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCHHEEEEH
LNEGLEKIGTFAFADAIKLEEISLPNSLETIERLAFYGNLELKELILPDNVKNFGKHVMN
HHHHHHHHCCHHHHCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHH
GLPKLKSLTIGNNINSLPSFFLSGVLDSLKEIHIKNKSTEFSVKKDTFAIPETVKFYVTS
CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCCCCEEEEEEEH
EHIKDVLKSNLSTSNDIIVEKVDNIKQETDVAKPKKNSNQGVVGWVKDKGLWYYLNESGS
HHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEECCCCC
MATGWVKDKGLWYYLNESGSMATGWVKDKGLWYYLNESGSMATGWVKDKGLWYYLNESGS
EEEEEEECCCEEEEECCCCCEEEEEEECCCEEEEECCCCCEEEEEEECCCEEEEECCCCC
MATGWVKDKGLWYYLNESGSMATGWVKDKGLWYYLNESGSMATGWVKDKGLWYYLNESGS
EEEEEEECCCEEEEECCCCCEEEEEEECCCEEEEECCCCCEEEEEEECCCEEEEECCCCC
MATGWFTVSGKWYYTYNSGDLLVNTTTPDGYRVNANGEWVG
EEEEEEEECCEEEEEECCCCEEEECCCCCCEEECCCCCCCC
>Mature Secondary Structure
MKKTTILSLTTAAVILAAYVPNEPILADTPSSEVIKETKVGSIIQQNNIKYKVLTVEGNI
CCCEEEEEHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHCCCEECCCCEEEEEEEECCE
GTVQVGNGVTPVEFEAGQDGKPFTIPTKITVGDKVFTVTEVASQAFSYYPDETGRIVYYP
EEEEECCCCCCEEEECCCCCCCEEEEEEEEECCEEEEHHHHHHHHHHCCCCCCCEEEEEC
SSITIPSSIKKIQKKGFHGSKAKTIIFDKGSQLEKIEDRAFDFSELEEIELPASLEYIGT
CCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHCCCHHHHHHCCCCCCCHHHCC
SAFSFSQKLKKLTFSSSSKLELISHEAFANLSNLEKLTLPKSVKTLGSNLFRLTTSLKHV
CHHHHHHHHHHHHCCCCCCEEEEHHHHHHCHHCCHHHCCCHHHHHHHHHHEEEHHHHEEE
DVEEGNESFASVDGVLFSKDKTQLIYYPSQKNDESYKTPKETKELASYSFNKNSYLKKLE
ECCCCCCCHHHCCCEEEECCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCHHEEEEH
LNEGLEKIGTFAFADAIKLEEISLPNSLETIERLAFYGNLELKELILPDNVKNFGKHVMN
HHHHHHHHCCHHHHCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHH
GLPKLKSLTIGNNINSLPSFFLSGVLDSLKEIHIKNKSTEFSVKKDTFAIPETVKFYVTS
CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCCCCEEEEEEEH
EHIKDVLKSNLSTSNDIIVEKVDNIKQETDVAKPKKNSNQGVVGWVKDKGLWYYLNESGS
HHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEECCCCC
MATGWVKDKGLWYYLNESGSMATGWVKDKGLWYYLNESGSMATGWVKDKGLWYYLNESGS
EEEEEEECCCEEEEECCCCCEEEEEEECCCEEEEECCCCCEEEEEEECCCEEEEECCCCC
MATGWVKDKGLWYYLNESGSMATGWVKDKGLWYYLNESGSMATGWVKDKGLWYYLNESGS
EEEEEEECCCEEEEECCCCCEEEEEEECCCEEEEECCCCCEEEEEEECCCEEEEECCCCC
MATGWFTVSGKWYYTYNSGDLLVNTTTPDGYRVNANGEWVG
EEEEEEEECCEEEEEECCCCEEEECCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11463916 [H]