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The map label for this gene is ynaJ [H]

Identifier: 225859890

GI number: 225859890

Start: 2053480

End: 2055033

Strand: Reverse

Name: ynaJ [H]

Synonym: SP70585_2243

Alternate gene names: 225859890

Gene position: 2055033-2053480 (Counterclockwise)

Preceding gene: 225859891

Following gene: 225859889

Centisome position: 94.07

GC content: 38.87

Gene sequence:

>1554_bases
ATGGAAAAACATGTTGAGCAACGTGTCGAAGACGTTACTTATAACAAAGCGAAGTTATGGCAAATCATCTTATTTGCGAT
GAATAATTCGTCGACGAATATTTACTTGGTTGCCTTTACTTTTGTGACTTATTTATCGACGGGTGTGCTTGGTCTGGCAG
CGCTGTTTGTTAGCCAACTGATGGGCTATATTCGTATCTTTGATGGTTTCATTGATCCAACAATTGGTGTTATTATTGAT
AAAACAGATACTAAGTTTGGTAAATATCGTCCTATCTTGGTTTTGGGGAATATCATTACGGCTAGTTCCCTTTTCATGAT
GTTGGGCTTAAGTGGAGTTAGTGAGAATCTCCGTCTTCCCTTGTTTATACTTGTTTTGATTATCCATAAAATTGGTTATT
CATTGCAACAGACTATTACGAAAGCGGGACAGGTTGCTCTTACCAATGATCCGAAACAACGTCCAATCTTCAATATTGTT
GACGGTATTGCAACAACAGTATTGATGACTGGTAGTCAGGTTGTTGTATCAGGAACATTGGTTCCTAAACATGGTGGCTT
CACACCAAGTTTCTTCCAAGAATTGTTCCTTGGTGTTGTGATTATTTCAGCTATTCTGGGTATCCTTGCTATTATCGGTA
TTTGGGAAAAAGACAATAAGAAATACTTTGGTCTTGGCGAAAAAACGCAAGAAACTAAGTTGAAAGACTACTGGAAAGTT
ATCAAAGGAAATAAACCTTTGCAGGTACTTTCAATCTCTGCAGCCTTTGTAAAATTTGTTGCTCAGTTGTTCGGTGATTC
AGTTATCGGGGTTATGCTTTATGGTATTATCTTCGGTGACTATGCTCTTTCTGGAAAAATGTCAATGCTCTTGATTTTGC
CTGGTATCCTCGTAACAGTTGGTGCGGCACAGTTGGCTCGTCGTAAAGGTTTACGCTTTGCCTATATTACAGCGCTTCAG
TTGGGTATTGCTGGTCTTGTTGCCTTGGCAGCGATGCTGTTTTCAGCAAAACCTGGTATGTTGGATTTAACAAATTGGAA
TCTCTACACAATCGGTTTCTTTGTTGTTTATATCATTGCACGTTATGCATCTGGCGCTCCATCCGGTTTGGTATTGACAA
TGGGTGCAGATATTACAGACTATGAAACATCAGTATCTGGTCGTTACTTGTCAGGTATGATTGGTACTATCTTCTCATTG
ACAGACTCAATTGCGTCTTCATTTGCTCCAATGGTTGTTGGTTTTGTGTTAGCAGGTATTGGATTTGGTAAAGAATATCC
AACTGTTGAAACAGCTTTCTCAACTGATTTGAGAATGGCACTAATTGTCTTGTTAACAGTAATTCCAGCAGCGGTATTGA
GCGTATCCTTGTTCTTGATGAAATTCTACAAACTAGACCGTGAAGAAATGGCTCGTATTCAAGAGAAAATCCATGTCATG
AAAGCGGCAAAAGATGAAGAACGAGTGCGTGCTATTGCGAAAAATGTTCCACTATCTGATATGGACTACGTTGATGTAAC
TCAGTATAAGGTTGAACAATACGAAGATAAATAA

Upstream 100 bases:

>100_bases
ATTTACAAAAACTGTTGACAAATCATCTGACGAATAGTAGAATATAGTTAAAGAAAACGCTTACGACTTTGTCGTAGAAA
ACATTTAGGAGGAATTTCCG

Downstream 100 bases:

>100_bases
GATTTTTGAATGTAAATAGTACAATGATTGACCTAGTTGGAGGCTTCCAGCTGGGTCTTTCAACTAGGAGGCGGTATGAA
GAAAATTTTAGCATTTGGAG

Product: sugar/sodium symporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 517; Mature: 517

Protein sequence:

>517_residues
MEKHVEQRVEDVTYNKAKLWQIILFAMNNSSTNIYLVAFTFVTYLSTGVLGLAALFVSQLMGYIRIFDGFIDPTIGVIID
KTDTKFGKYRPILVLGNIITASSLFMMLGLSGVSENLRLPLFILVLIIHKIGYSLQQTITKAGQVALTNDPKQRPIFNIV
DGIATTVLMTGSQVVVSGTLVPKHGGFTPSFFQELFLGVVIISAILGILAIIGIWEKDNKKYFGLGEKTQETKLKDYWKV
IKGNKPLQVLSISAAFVKFVAQLFGDSVIGVMLYGIIFGDYALSGKMSMLLILPGILVTVGAAQLARRKGLRFAYITALQ
LGIAGLVALAAMLFSAKPGMLDLTNWNLYTIGFFVVYIIARYASGAPSGLVLTMGADITDYETSVSGRYLSGMIGTIFSL
TDSIASSFAPMVVGFVLAGIGFGKEYPTVETAFSTDLRMALIVLLTVIPAAVLSVSLFLMKFYKLDREEMARIQEKIHVM
KAAKDEERVRAIAKNVPLSDMDYVDVTQYKVEQYEDK

Sequences:

>Translated_517_residues
MEKHVEQRVEDVTYNKAKLWQIILFAMNNSSTNIYLVAFTFVTYLSTGVLGLAALFVSQLMGYIRIFDGFIDPTIGVIID
KTDTKFGKYRPILVLGNIITASSLFMMLGLSGVSENLRLPLFILVLIIHKIGYSLQQTITKAGQVALTNDPKQRPIFNIV
DGIATTVLMTGSQVVVSGTLVPKHGGFTPSFFQELFLGVVIISAILGILAIIGIWEKDNKKYFGLGEKTQETKLKDYWKV
IKGNKPLQVLSISAAFVKFVAQLFGDSVIGVMLYGIIFGDYALSGKMSMLLILPGILVTVGAAQLARRKGLRFAYITALQ
LGIAGLVALAAMLFSAKPGMLDLTNWNLYTIGFFVVYIIARYASGAPSGLVLTMGADITDYETSVSGRYLSGMIGTIFSL
TDSIASSFAPMVVGFVLAGIGFGKEYPTVETAFSTDLRMALIVLLTVIPAAVLSVSLFLMKFYKLDREEMARIQEKIHVM
KAAKDEERVRAIAKNVPLSDMDYVDVTQYKVEQYEDK
>Mature_517_residues
MEKHVEQRVEDVTYNKAKLWQIILFAMNNSSTNIYLVAFTFVTYLSTGVLGLAALFVSQLMGYIRIFDGFIDPTIGVIID
KTDTKFGKYRPILVLGNIITASSLFMMLGLSGVSENLRLPLFILVLIIHKIGYSLQQTITKAGQVALTNDPKQRPIFNIV
DGIATTVLMTGSQVVVSGTLVPKHGGFTPSFFQELFLGVVIISAILGILAIIGIWEKDNKKYFGLGEKTQETKLKDYWKV
IKGNKPLQVLSISAAFVKFVAQLFGDSVIGVMLYGIIFGDYALSGKMSMLLILPGILVTVGAAQLARRKGLRFAYITALQ
LGIAGLVALAAMLFSAKPGMLDLTNWNLYTIGFFVVYIIARYASGAPSGLVLTMGADITDYETSVSGRYLSGMIGTIFSL
TDSIASSFAPMVVGFVLAGIGFGKEYPTVETAFSTDLRMALIVLLTVIPAAVLSVSLFLMKFYKLDREEMARIQEKIHVM
KAAKDEERVRAIAKNVPLSDMDYVDVTQYKVEQYEDK

Specific function: Unknown

COG id: COG2211

COG function: function code G; Na+/melibiose symporter and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:galactoside symporter (TC 2.A.2) family [H]

Homologues:

Organism=Escherichia coli, GI1786466, Length=446, Percent_Identity=21.3004484304933, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001927
- InterPro:   IPR018043 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 56720; Mature: 56720

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKHVEQRVEDVTYNKAKLWQIILFAMNNSSTNIYLVAFTFVTYLSTGVLGLAALFVSQL
CCHHHHHHHHHHCCCHHHHHHHHHEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH
MGYIRIFDGFIDPTIGVIIDKTDTKFGKYRPILVLGNIITASSLFMMLGLSGVSENLRLP
HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCHH
LFILVLIIHKIGYSLQQTITKAGQVALTNDPKQRPIFNIVDGIATTVLMTGSQVVVSGTL
HHHHHHHHHHHCHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEE
VPKHGGFTPSFFQELFLGVVIISAILGILAIIGIWEKDNKKYFGLGEKTQETKLKDYWKV
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCEEECCCCCHHHHHHHHHHHH
IKGNKPLQVLSISAAFVKFVAQLFGDSVIGVMLYGIIFGDYALSGKMSMLLILPGILVTV
HCCCCCEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
GAAQLARRKGLRFAYITALQLGIAGLVALAAMLFSAKPGMLDLTNWNLYTIGFFVVYIIA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHH
RYASGAPSGLVLTMGADITDYETSVSGRYLSGMIGTIFSLTDSIASSFAPMVVGFVLAGI
HHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GFGKEYPTVETAFSTDLRMALIVLLTVIPAAVLSVSLFLMKFYKLDREEMARIQEKIHVM
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
KAAKDEERVRAIAKNVPLSDMDYVDVTQYKVEQYEDK
HHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MEKHVEQRVEDVTYNKAKLWQIILFAMNNSSTNIYLVAFTFVTYLSTGVLGLAALFVSQL
CCHHHHHHHHHHCCCHHHHHHHHHEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH
MGYIRIFDGFIDPTIGVIIDKTDTKFGKYRPILVLGNIITASSLFMMLGLSGVSENLRLP
HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCHH
LFILVLIIHKIGYSLQQTITKAGQVALTNDPKQRPIFNIVDGIATTVLMTGSQVVVSGTL
HHHHHHHHHHHCHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEE
VPKHGGFTPSFFQELFLGVVIISAILGILAIIGIWEKDNKKYFGLGEKTQETKLKDYWKV
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCEEECCCCCHHHHHHHHHHHH
IKGNKPLQVLSISAAFVKFVAQLFGDSVIGVMLYGIIFGDYALSGKMSMLLILPGILVTV
HCCCCCEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
GAAQLARRKGLRFAYITALQLGIAGLVALAAMLFSAKPGMLDLTNWNLYTIGFFVVYIIA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHH
RYASGAPSGLVLTMGADITDYETSVSGRYLSGMIGTIFSLTDSIASSFAPMVVGFVLAGI
HHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GFGKEYPTVETAFSTDLRMALIVLLTVIPAAVLSVSLFLMKFYKLDREEMARIQEKIHVM
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
KAAKDEERVRAIAKNVPLSDMDYVDVTQYKVEQYEDK
HHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]