| Definition | Streptococcus pneumoniae 70585, complete genome. |
|---|---|
| Accession | NC_012468 |
| Length | 2,184,682 |
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The map label for this gene is 225859743
Identifier: 225859743
GI number: 225859743
Start: 1895409
End: 1897439
Strand: Reverse
Name: 225859743
Synonym: SP70585_2059
Alternate gene names: NA
Gene position: 1897439-1895409 (Counterclockwise)
Preceding gene: 225859744
Following gene: 225859742
Centisome position: 86.85
GC content: 43.08
Gene sequence:
>2031_bases ATGAAACGTTTATTTATTTTGATTTCAATGGTATTGGTATCGCTTTATATGGTGATAACTTCCGTTGACCATCGAGAAGA GATTTTATTTGGTAACTATCCTTCTGTTGATGTGACAGGAATGATGATAAATCAACCAGTAGCTAGTCGGGAAGAGGTGA CAGAGGCTTTGAGTCACTTGGCGGTAGAGCACAATAGTCTCATTGCTCGTCGAATCGTTGAGCCAAATGAAGCTGGAGAA ACACGCTTTACCTATGCCACTTATGGTGAGGGAAAGCTTCCAGAAGGTCTGACCATTTCCTCCAAGGAGAGTGCAGAAAC GAGTGATTTATTAGGGTCTTACTTGATTGTGTCAGGAAGTTTGGATGGAGTGAGCTTACAGACCACCTTGAAAGAGCTTG GTTATCAAGGCTTTGTTTCGAATGGAGAAGATCCATTTTCGATAGTCTTACTATTGACGGCCACCCCTATGGTGCTACTG AGTTTAGCTATTTTTCTGCTGACCTTTATGAGTCTGACCCTGATTTATCGGATCAAATCCCTTCGTCAGGCAGGGATTCG CTTAATAGCTGGTGAGAGCTTGTTTGGAGTTGCTCTCAGACCAGTGTTAGAAGATGTGAGACAGCTTATCTGCTCAGTGC TGGTATCCAGTCTTTTGGGATTGGGGATTCTCTGGTATCAAGGTGCCTTGTTTATGGCAACGGTGCAACTGGTCATCATT GCTCTTCTACTTTATGGATTGACCTTGGCAGGGATTTCTACCTTACTAAGTGTCGTCTATCTACTTGGTTTACAGGAAAA TAGTCTGGTGGATCTATTGAAAGGGAAACTCCCTCTCAAACGTATGATGACATTGATGATGGTGGGGCAACTCTTAGCTG TATTGGTGGTCGGATCGAGTGCGACAGCTCTCCTACCCCACTACCGTGAAATGCAGGAAATGGAGAGAGCTAGCAATAAA TGGAGCCAGTCCTCAGACCGTTACCGTCTATCCTTTGGTTGGTCTAGTGCATTTGCCGATGAAGAAGGAACGCGTAAGGA TAATCGTGAGTGGCAGACATTTACTGAAGAACGGTTAGCCAATACAGACTCTTTTTATATTATGAGCAATGTTGACAATT TCTCAGATGGAGCAGAAGTGGACCTAGATGGCAATCGTCTCAGTGACTACACACCGTCAGGGAATGTTATCTATGTCTCA CCACGCTATCTGATAGAAGAAAAGATTACCGTTTCTTCAGAGTTTATGGACAAGATGCAAAACTTGTCTGAGGGAGAGTT TGGGCTAATCTTGCCTGAGAGCTTGCGAGAGCAGTCTACCTACTACCAAAGATTGTTTACAGATTACCTGCAAAACTTTT CATCTGAAAGTGTAGAAGTGACGAGTCAGAAATACTACCTCCCACAGGTAAGTCTAGCTTTTACAGAAACAGGACAGGAA CGTTTCCTCTATAATGATGGGTACAAGACAACACGCCAGTACCTAAAAGATCCGATTATTGTAGTTCTAACGCCGCAAGC GACTGGAACAAGACCTGTTGCAGGGATGTTGTGGGGAACTACGGCTAATAGTGCCTTGAAACTAGATCGATATGGAGACA GCATCACAGCTCTAAAAGAGCAAGGTCTGTATCACAAGGTTTCTTACTTGGTAAAAAGCCAGCTATTTTTTGCCAAGGTA CTAAATGACAAACGGGTAGAGTTTTACTCTCTCCTTATTGGGACGATTTTGACCCTGTCTACGGCTATCTTGTTATTTGA TTCCATGAATCTTCTCTATTTTGAGCAGTTCAGACGGGAGCTTATGATTAAACGTCTTGCTGGTATGACAATCTATGAGC TTCATGGCAAGTATTTACTGGCGCAAGGAGGAGTTCTCTTGCTTGGCCTAGTCCTATCTAGTATTTTGACAAGAGATGGT TTGATTAGCGCTCTAGTTGTAGCTTTGTTTACGCTTAACGCCCTCTTGATTTTAGTAAGGCAGGACAAAAAAGAAGAAGC TGGTAGCATGGCAGTATTGAAAGGAAAATAA
Upstream 100 bases:
>100_bases GTTGCATTCTACTATAATGTTTAGAATGGTATAGCCCTATTGTTTAGCTTTACTTGGTCACCTTCTCACTAAGTGACCAA GTAACTTTTTGGAGGAAATG
Downstream 100 bases:
>100_bases GATGATTGATATTCAAGGATTGGAAAAGAAATTTAATGACCGCGCGATTTTCTCTGGTTTGAATCTCAAGCTGGAGAAGG GCAAGGTTTATGCCTTAATC
Product: immunity protein, putative
Products: NA
Alternate protein names: Lactococcin; Immunity Protein; Bacteriocine Associated ABC Transporter Permease; Bacteriocin-Associated Membrane Protein
Number of amino acids: Translated: 676; Mature: 676
Protein sequence:
>676_residues MKRLFILISMVLVSLYMVITSVDHREEILFGNYPSVDVTGMMINQPVASREEVTEALSHLAVEHNSLIARRIVEPNEAGE TRFTYATYGEGKLPEGLTISSKESAETSDLLGSYLIVSGSLDGVSLQTTLKELGYQGFVSNGEDPFSIVLLLTATPMVLL SLAIFLLTFMSLTLIYRIKSLRQAGIRLIAGESLFGVALRPVLEDVRQLICSVLVSSLLGLGILWYQGALFMATVQLVII ALLLYGLTLAGISTLLSVVYLLGLQENSLVDLLKGKLPLKRMMTLMMVGQLLAVLVVGSSATALLPHYREMQEMERASNK WSQSSDRYRLSFGWSSAFADEEGTRKDNREWQTFTEERLANTDSFYIMSNVDNFSDGAEVDLDGNRLSDYTPSGNVIYVS PRYLIEEKITVSSEFMDKMQNLSEGEFGLILPESLREQSTYYQRLFTDYLQNFSSESVEVTSQKYYLPQVSLAFTETGQE RFLYNDGYKTTRQYLKDPIIVVLTPQATGTRPVAGMLWGTTANSALKLDRYGDSITALKEQGLYHKVSYLVKSQLFFAKV LNDKRVEFYSLLIGTILTLSTAILLFDSMNLLYFEQFRRELMIKRLAGMTIYELHGKYLLAQGGVLLLGLVLSSILTRDG LISALVVALFTLNALLILVRQDKKEEAGSMAVLKGK
Sequences:
>Translated_676_residues MKRLFILISMVLVSLYMVITSVDHREEILFGNYPSVDVTGMMINQPVASREEVTEALSHLAVEHNSLIARRIVEPNEAGE TRFTYATYGEGKLPEGLTISSKESAETSDLLGSYLIVSGSLDGVSLQTTLKELGYQGFVSNGEDPFSIVLLLTATPMVLL SLAIFLLTFMSLTLIYRIKSLRQAGIRLIAGESLFGVALRPVLEDVRQLICSVLVSSLLGLGILWYQGALFMATVQLVII ALLLYGLTLAGISTLLSVVYLLGLQENSLVDLLKGKLPLKRMMTLMMVGQLLAVLVVGSSATALLPHYREMQEMERASNK WSQSSDRYRLSFGWSSAFADEEGTRKDNREWQTFTEERLANTDSFYIMSNVDNFSDGAEVDLDGNRLSDYTPSGNVIYVS PRYLIEEKITVSSEFMDKMQNLSEGEFGLILPESLREQSTYYQRLFTDYLQNFSSESVEVTSQKYYLPQVSLAFTETGQE RFLYNDGYKTTRQYLKDPIIVVLTPQATGTRPVAGMLWGTTANSALKLDRYGDSITALKEQGLYHKVSYLVKSQLFFAKV LNDKRVEFYSLLIGTILTLSTAILLFDSMNLLYFEQFRRELMIKRLAGMTIYELHGKYLLAQGGVLLLGLVLSSILTRDG LISALVVALFTLNALLILVRQDKKEEAGSMAVLKGK >Mature_676_residues MKRLFILISMVLVSLYMVITSVDHREEILFGNYPSVDVTGMMINQPVASREEVTEALSHLAVEHNSLIARRIVEPNEAGE TRFTYATYGEGKLPEGLTISSKESAETSDLLGSYLIVSGSLDGVSLQTTLKELGYQGFVSNGEDPFSIVLLLTATPMVLL SLAIFLLTFMSLTLIYRIKSLRQAGIRLIAGESLFGVALRPVLEDVRQLICSVLVSSLLGLGILWYQGALFMATVQLVII ALLLYGLTLAGISTLLSVVYLLGLQENSLVDLLKGKLPLKRMMTLMMVGQLLAVLVVGSSATALLPHYREMQEMERASNK WSQSSDRYRLSFGWSSAFADEEGTRKDNREWQTFTEERLANTDSFYIMSNVDNFSDGAEVDLDGNRLSDYTPSGNVIYVS PRYLIEEKITVSSEFMDKMQNLSEGEFGLILPESLREQSTYYQRLFTDYLQNFSSESVEVTSQKYYLPQVSLAFTETGQE RFLYNDGYKTTRQYLKDPIIVVLTPQATGTRPVAGMLWGTTANSALKLDRYGDSITALKEQGLYHKVSYLVKSQLFFAKV LNDKRVEFYSLLIGTILTLSTAILLFDSMNLLYFEQFRRELMIKRLAGMTIYELHGKYLLAQGGVLLLGLVLSSILTRDG LISALVVALFTLNALLILVRQDKKEEAGSMAVLKGK
Specific function: Unknown
COG id: COG4652
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75472; Mature: 75472
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLFILISMVLVSLYMVITSVDHREEILFGNYPSVDVTGMMINQPVASREEVTEALSHL CHHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHH AVEHNSLIARRIVEPNEAGETRFTYATYGEGKLPEGLTISSKESAETSDLLGSYLIVSGS HHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEECCCCCCHHHHHHHHHEEEECC LDGVSLQTTLKELGYQGFVSNGEDPFSIVLLLTATPMVLLSLAIFLLTFMSLTLIYRIKS CCCCHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRQAGIRLIAGESLFGVALRPVLEDVRQLICSVLVSSLLGLGILWYQGALFMATVQLVII HHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALLLYGLTLAGISTLLSVVYLLGLQENSLVDLLKGKLPLKRMMTLMMVGQLLAVLVVGSS HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC ATALLPHYREMQEMERASNKWSQSSDRYRLSFGWSSAFADEEGTRKDNREWQTFTEERLA CHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHCCCCCCCCCCCCHHHHHHHHHHC NTDSFYIMSNVDNFSDGAEVDLDGNRLSDYTPSGNVIYVSPRYLIEEKITVSSEFMDKMQ CCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHH NLSEGEFGLILPESLREQSTYYQRLFTDYLQNFSSESVEVTSQKYYLPQVSLAFTETGQE CCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEECCCEEEEEECCCCC RFLYNDGYKTTRQYLKDPIIVVLTPQATGTRPVAGMLWGTTANSALKLDRYGDSITALKE CEEECCCCHHHHHHHHCCEEEEECCCCCCCCCCHHHEECCCCCCEEEEHHCCCHHHHHHH QGLYHKVSYLVKSQLFFAKVLNDKRVEFYSLLIGTILTLSTAILLFDSMNLLYFEQFRRE CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH LMIKRLAGMTIYELHGKYLLAQGGVLLLGLVLSSILTRDGLISALVVALFTLNALLILVR HHHHHHHCCEEEEECCCEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHC QDKKEEAGSMAVLKGK CCCHHCCCCEEEEECC >Mature Secondary Structure MKRLFILISMVLVSLYMVITSVDHREEILFGNYPSVDVTGMMINQPVASREEVTEALSHL CHHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHH AVEHNSLIARRIVEPNEAGETRFTYATYGEGKLPEGLTISSKESAETSDLLGSYLIVSGS HHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEECCCCCCHHHHHHHHHEEEECC LDGVSLQTTLKELGYQGFVSNGEDPFSIVLLLTATPMVLLSLAIFLLTFMSLTLIYRIKS CCCCHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRQAGIRLIAGESLFGVALRPVLEDVRQLICSVLVSSLLGLGILWYQGALFMATVQLVII HHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALLLYGLTLAGISTLLSVVYLLGLQENSLVDLLKGKLPLKRMMTLMMVGQLLAVLVVGSS HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC ATALLPHYREMQEMERASNKWSQSSDRYRLSFGWSSAFADEEGTRKDNREWQTFTEERLA CHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHCCCCCCCCCCCCHHHHHHHHHHC NTDSFYIMSNVDNFSDGAEVDLDGNRLSDYTPSGNVIYVSPRYLIEEKITVSSEFMDKMQ CCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHH NLSEGEFGLILPESLREQSTYYQRLFTDYLQNFSSESVEVTSQKYYLPQVSLAFTETGQE CCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEECCCEEEEEECCCCC RFLYNDGYKTTRQYLKDPIIVVLTPQATGTRPVAGMLWGTTANSALKLDRYGDSITALKE CEEECCCCHHHHHHHHCCEEEEECCCCCCCCCCHHHEECCCCCCEEEEHHCCCHHHHHHH QGLYHKVSYLVKSQLFFAKVLNDKRVEFYSLLIGTILTLSTAILLFDSMNLLYFEQFRRE CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH LMIKRLAGMTIYELHGKYLLAQGGVLLLGLVLSSILTRDGLISALVVALFTLNALLILVR HHHHHHHCCEEEEECCCEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHC QDKKEEAGSMAVLKGK CCCHHCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA