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The map label for this gene is int [H]

Identifier: 225859547

GI number: 225859547

Start: 1708742

End: 1709707

Strand: Reverse

Name: int [H]

Synonym: SP70585_1838

Alternate gene names: 225859547

Gene position: 1709707-1708742 (Counterclockwise)

Preceding gene: 225859548

Following gene: 225859545

Centisome position: 78.26

GC content: 30.12

Gene sequence:

>966_bases
TTGCGCTTTGATATGACCTTACCAGAACTGTACCAAGAATGGCTTGATTTAAAAATTTTTCCTAGCAATAGAAGTGAAGT
CACAAAAAAGAAATATCTTATGAGAAAGAATGTTATTAAAAGGCTATTTGGAAATAAACCTGTATCACAAATTAAGCCTA
GTGAATACCAAAGAATTATGAATAAGTATGGGCAAACAGTTAGTAGAAATTTTCTGGGTAGATTGAATTCTGGAATTCGT
GCGAGTATACAGATGGCTATTGCTGATAAAGTGGTAATAGAAGATTTTACTGCTTATGTAGATTTATTTTCATCTAAGAG
TGGACAAAAGATTGACGAGAAATATTTACATACAGAATCGGATTATCAAAAAGTATTAGTGTATTTAAAAAATAAGTTTG
ATTATCAGAAATCTATTGTACCGTATGTAATTTATTTCCTTTTTAAAACTGGCATGCGTTTTTCTGAATTGATTGCTCTG
ACTTGGAATGAGGTTGACGAGGTTGGAGAGCAATTAAAAACTTATCGTCGTTATAATACCGCTATTCATAAGTTTACTCC
ACCTAAAAACAATACTTCAATAAGATTAGTTCCCATTACTTCAGATATGCTTTCTTTATTGAAAACATTGAAAATATTAC
AACTAAAAACAAACAAAGAATTAAATATTGACAATAAAAATAATTTGATTTTTCAGCATTTTGGCTATGCTTACGATGTT
CCAGATATTGCAACAGTCAATAAAGCTATAAAAGTAATGTTGAAGGAATTGCAAATTTCTCCATTGATTACTACCAAAGG
AGCTAGACACACTTATGGTAGTTATTTATGGCATAATAATATTGATTTGGGAGTTATTGCGAAAATTTTAGGACACAAAG
ATATCTCTATGTTGGTTGAAGTTTATGGTCACACATTGGAGGAAAAAATTAGTGAGGAATTTATGGCTGTGAAAAGTTTA
TTGTAA

Upstream 100 bases:

>100_bases
GAGGAGCAAGAGCCTACTCCATAAAAGCGGATTTAAAACAAAACGAGAAGCTAAAATAGAAGCTGAGAAGGTGCTTCATA
AGATAAACACAGGAAGTGTC

Downstream 100 bases:

>100_bases
AAACACGGCAAATTGCACGACAATTTTTAAAAGGAAAGCAAAAAAAGCCCTATATTATAAGACTTTTCCTGTTGTATTTA
GATGCCCCCTACAGGGATCG

Product: integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MRFDMTLPELYQEWLDLKIFPSNRSEVTKKKYLMRKNVIKRLFGNKPVSQIKPSEYQRIMNKYGQTVSRNFLGRLNSGIR
ASIQMAIADKVVIEDFTAYVDLFSSKSGQKIDEKYLHTESDYQKVLVYLKNKFDYQKSIVPYVIYFLFKTGMRFSELIAL
TWNEVDEVGEQLKTYRRYNTAIHKFTPPKNNTSIRLVPITSDMLSLLKTLKILQLKTNKELNIDNKNNLIFQHFGYAYDV
PDIATVNKAIKVMLKELQISPLITTKGARHTYGSYLWHNNIDLGVIAKILGHKDISMLVEVYGHTLEEKISEEFMAVKSL
L

Sequences:

>Translated_321_residues
MRFDMTLPELYQEWLDLKIFPSNRSEVTKKKYLMRKNVIKRLFGNKPVSQIKPSEYQRIMNKYGQTVSRNFLGRLNSGIR
ASIQMAIADKVVIEDFTAYVDLFSSKSGQKIDEKYLHTESDYQKVLVYLKNKFDYQKSIVPYVIYFLFKTGMRFSELIAL
TWNEVDEVGEQLKTYRRYNTAIHKFTPPKNNTSIRLVPITSDMLSLLKTLKILQLKTNKELNIDNKNNLIFQHFGYAYDV
PDIATVNKAIKVMLKELQISPLITTKGARHTYGSYLWHNNIDLGVIAKILGHKDISMLVEVYGHTLEEKISEEFMAVKSL
L
>Mature_321_residues
MRFDMTLPELYQEWLDLKIFPSNRSEVTKKKYLMRKNVIKRLFGNKPVSQIKPSEYQRIMNKYGQTVSRNFLGRLNSGIR
ASIQMAIADKVVIEDFTAYVDLFSSKSGQKIDEKYLHTESDYQKVLVYLKNKFDYQKSIVPYVIYFLFKTGMRFSELIAL
TWNEVDEVGEQLKTYRRYNTAIHKFTPPKNNTSIRLVPITSDMLSLLKTLKILQLKTNKELNIDNKNNLIFQHFGYAYDV
PDIATVNKAIKVMLKELQISPLITTKGARHTYGSYLWHNNIDLGVIAKILGHKDISMLVEVYGHTLEEKISEEFMAVKSL
L

Specific function: Putative integrase that is involved in the insertion of the integrative and conjugative element ICEBs1. Required for the excision of ICEBs1 from the donor cell genome and subsequent integration in the recipient cell genome. Appears not to be transferred t

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 37404; Mature: 37404

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFDMTLPELYQEWLDLKIFPSNRSEVTKKKYLMRKNVIKRLFGNKPVSQIKPSEYQRIM
CCCCCCHHHHHHHHHCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHH
NKYGQTVSRNFLGRLNSGIRASIQMAIADKVVIEDFTAYVDLFSSKSGQKIDEKYLHTES
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCH
DYQKVLVYLKNKFDYQKSIVPYVIYFLFKTGMRFSELIALTWNEVDEVGEQLKTYRRYNT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIHKFTPPKNNTSIRLVPITSDMLSLLKTLKILQLKTNKELNIDNKNNLIFQHFGYAYDV
HHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEECC
PDIATVNKAIKVMLKELQISPLITTKGARHTYGSYLWHNNIDLGVIAKILGHKDISMLVE
CCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCHHEECCCCHHHHHHHHCCCHHHHHHH
VYGHTLEEKISEEFMAVKSLL
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRFDMTLPELYQEWLDLKIFPSNRSEVTKKKYLMRKNVIKRLFGNKPVSQIKPSEYQRIM
CCCCCCHHHHHHHHHCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHH
NKYGQTVSRNFLGRLNSGIRASIQMAIADKVVIEDFTAYVDLFSSKSGQKIDEKYLHTES
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCH
DYQKVLVYLKNKFDYQKSIVPYVIYFLFKTGMRFSELIALTWNEVDEVGEQLKTYRRYNT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIHKFTPPKNNTSIRLVPITSDMLSLLKTLKILQLKTNKELNIDNKNNLIFQHFGYAYDV
HHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEECC
PDIATVNKAIKVMLKELQISPLITTKGARHTYGSYLWHNNIDLGVIAKILGHKDISMLVE
CCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCHHEECCCCHHHHHHHHCCCHHHHHHH
VYGHTLEEKISEEFMAVKSLL
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]