Click here to switch to the map view.

The map label for this gene is yrrO [H]

Identifier: 225859193

GI number: 225859193

Start: 1358205

End: 1358930

Strand: Reverse

Name: yrrO [H]

Synonym: SP70585_1467

Alternate gene names: 225859193

Gene position: 1358930-1358205 (Counterclockwise)

Preceding gene: 225859195

Following gene: 225859192

Centisome position: 62.2

GC content: 42.56

Gene sequence:

>726_bases
ATGCGTGATGCCAACCGTGGTGGATGTTCTCAGTCATGCCGTTGGAAATACGACCTTTACGATATGCCATTTGGGAAAGA
ACGTAAGAGTTTGCAGGGTGAGATTCCAGAAGAATTTTCAATGTCAGCCGTTGACATGTCTATGATTGACCACATTCCAG
ATATGATTGAAAATGGTGTGGACAGTCTAAAAATCGAAGGACGTATGAAGTCTATTCACTACGTATCAACAGTAACCAAC
TGCTACAAGGCGGCTGTGGATGCCTATCTTGAAAGTTCTGAAAAGTTTGAAGCTATCAAACAAGACTTGGTGGACGAGAT
GTGGAAGGTTGCCCAACGTGAACTGGTTACAGGATTTTACTATGGTACACCATCTGAAAATGAGCAGTTGTTTGGTGCTC
GTCGTAAAATTCCTGAGTACAAGTTTGTCGCTGAAGTGGTTTCTTATGATGATGCGACACAAACAGCAACCATTCGTCAA
CGGAACGTCATTAACGAAGGGGACCAAGTTGAGTTTTATGGTCCAGGTTTCCGTCATTTTGAAACCTATATTGAAGATTT
GCATGATGCCAAAGGAAATAAAATCGACCGCGCTCCAAATCCAATGGAACTATTGACTATTAAAGTCCCACAACCTGTTC
AAGCTGGAGACATGGTTCGAGCTCTTAAAGAGGGGCTTATCAATCTTTATAAGGAAGATGGAACCAGCGTCACAGTTCGA
GCTTAA

Upstream 100 bases:

>100_bases
TATTTTGACTACTTGTTAAAACTGGGGTAATTTTCGACTGTTTAACAGTTATTATGCAAAGTCTAAAAGGTTAGAATTGT
CAAAACAATCCGTCTAGAGT

Downstream 100 bases:

>100_bases
TGTAGTTGTTTAGTTTTAAAAAATTATGCAAAGCTCCATATACAACACTTAAACGAGATTAAAGAATGGCGAAATCCCCT
GATGCGCAAGAGATTAGCTG

Product: peptidase, U32 family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MRDANRGGCSQSCRWKYDLYDMPFGKERKSLQGEIPEEFSMSAVDMSMIDHIPDMIENGVDSLKIEGRMKSIHYVSTVTN
CYKAAVDAYLESSEKFEAIKQDLVDEMWKVAQRELVTGFYYGTPSENEQLFGARRKIPEYKFVAEVVSYDDATQTATIRQ
RNVINEGDQVEFYGPGFRHFETYIEDLHDAKGNKIDRAPNPMELLTIKVPQPVQAGDMVRALKEGLINLYKEDGTSVTVR
A

Sequences:

>Translated_241_residues
MRDANRGGCSQSCRWKYDLYDMPFGKERKSLQGEIPEEFSMSAVDMSMIDHIPDMIENGVDSLKIEGRMKSIHYVSTVTN
CYKAAVDAYLESSEKFEAIKQDLVDEMWKVAQRELVTGFYYGTPSENEQLFGARRKIPEYKFVAEVVSYDDATQTATIRQ
RNVINEGDQVEFYGPGFRHFETYIEDLHDAKGNKIDRAPNPMELLTIKVPQPVQAGDMVRALKEGLINLYKEDGTSVTVR
A
>Mature_241_residues
MRDANRGGCSQSCRWKYDLYDMPFGKERKSLQGEIPEEFSMSAVDMSMIDHIPDMIENGVDSLKIEGRMKSIHYVSTVTN
CYKAAVDAYLESSEKFEAIKQDLVDEMWKVAQRELVTGFYYGTPSENEQLFGARRKIPEYKFVAEVVSYDDATQTATIRQ
RNVINEGDQVEFYGPGFRHFETYIEDLHDAKGNKIDRAPNPMELLTIKVPQPVQAGDMVRALKEGLINLYKEDGTSVTVR
A

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 27493; Mature: 27493

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDANRGGCSQSCRWKYDLYDMPFGKERKSLQGEIPEEFSMSAVDMSMIDHIPDMIENGV
CCCCCCCCCCCCCEEEEECCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
DSLKIEGRMKSIHYVSTVTNCYKAAVDAYLESSEKFEAIKQDLVDEMWKVAQRELVTGFY
CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHEE
YGTPSENEQLFGARRKIPEYKFVAEVVSYDDATQTATIRQRNVINEGDQVEFYGPGFRHF
CCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCCHHHH
ETYIEDLHDAKGNKIDRAPNPMELLTIKVPQPVQAGDMVRALKEGLINLYKEDGTSVTVR
HHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEE
A
C
>Mature Secondary Structure
MRDANRGGCSQSCRWKYDLYDMPFGKERKSLQGEIPEEFSMSAVDMSMIDHIPDMIENGV
CCCCCCCCCCCCCEEEEECCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
DSLKIEGRMKSIHYVSTVTNCYKAAVDAYLESSEKFEAIKQDLVDEMWKVAQRELVTGFY
CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHEE
YGTPSENEQLFGARRKIPEYKFVAEVVSYDDATQTATIRQRNVINEGDQVEFYGPGFRHF
CCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCCHHHH
ETYIEDLHDAKGNKIDRAPNPMELLTIKVPQPVQAGDMVRALKEGLINLYKEDGTSVTVR
HHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEE
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]