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The map label for this gene is ywbD [H]

Identifier: 225859145

GI number: 225859145

Start: 1313159

End: 1314322

Strand: Reverse

Name: ywbD [H]

Synonym: SP70585_1417

Alternate gene names: 225859145

Gene position: 1314322-1313159 (Counterclockwise)

Preceding gene: 225859146

Following gene: 225859144

Centisome position: 60.16

GC content: 41.41

Gene sequence:

>1164_bases
ATGAATAGAATAAGAGTCAGCAAAAGGGTTGAAAAGAAGCTTGCTAAGGGGCTAGTTTTACTAGAAGCCAGTGATCTTGA
GAATGTCAATCTTAAGGATCGGGAAGTAGAGGTGCAGGGTCAGGAAGGAAACTTTCTTGGGACTGCCTACCTTTCTCAGC
AAAACAAGGGCTTGGGCTGGTTTATCAGCAAAGACAAGGTGGCCTTCAATCAAGCTTTCTTTGAAACGTTGTTTAGAAAA
GCCAAAGAAAAGAGAAACGCCTACTATCAAGATGATTTGACAACTGCCTTTCGTCTCTTTAATCAAGAGGGAGATGGCTT
TGGGGGTCTGACAGTGGACCTTTATGGCGACTACGCCGTCTTTTCTTGGTATAACTCTTATGTTTATCAGATTCGTCAGA
CTATATCAGAAGCCTTTAGACAGGTTTTCCCTGAGGTTTTAGGGGCTTATGAGAAAATCCGCTTTAAGGGTTTGGACTAT
GAATCTGCCCATGTTTATGGTCAAGAAGCACCTGACTTTTTCACTGTTTTAGAAAATGGTGTCCTGTATCAAGTCTTTAT
GAATGATGGCTTGATGACAGGAATTTTCCTAGACCAGCATGAGGTTCGCGGTAGTTTAGTTGACGGCTTGGCTATGGGTA
AATCCTTGCTCAATATGTTTTCCTACACAGCGGCTTTTTCAGTAGCTGCGGCCATGGGAGGAGCTAGCCAGACAACTTCT
GTTGATCTAGCCAAACGTTCACGAGAATTGTCTCAAGCGCATTTTCAGGCAAATGGGCTCAGCACAGACGAGCATCGTTT
TATAGTCATGGATGTCTTTGAGTATTTCAAATATGCCAAACGCAAAAACTTGACCTACGATGTGATTGTCCTAGATCCGC
CTAGCTTTGCTCGGAATAAAAAACAAACTTTCTCTGTGGCCAAGGATTATCACAAGTTGATTTCCCAGAGTCTTGAGATT
TTAAATCCGGGAGGGATTATCATTGCCAGTACCAATGCTGCCAATGTTTCCCGTCAGAAATTTACAGAACAAATTGATAA
AGGCTTTGCAGGAAGAAGTTACCAGATTTTAAACAAATATGGTCTTCCAGCAGATTTTGCCTATAATAAAAAAGATGAAA
GTAGTAATTACCTCAAGGTGATTAGTATGAAGGTTAGTAAATGA

Upstream 100 bases:

>100_bases
TTTGCAGGAAGTCTAGTATACCATTTTTTAAAAGAAGAGTAAAAAAGCAAGGGTAGTTTCTTTTTTGAGAATTGTCTAAA
AGTTTGATATAATGGTAGTT

Downstream 100 bases:

>100_bases
AATTAATCGTTTCAGTAATGCCAAGAAGTTTAGAGGAGGCTCAGGCTCTGGATGCCACGAGGTACCTGGATGCCGACATC
ATTGAATGGCGTGCCGACTA

Product: methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MNRIRVSKRVEKKLAKGLVLLEASDLENVNLKDREVEVQGQEGNFLGTAYLSQQNKGLGWFISKDKVAFNQAFFETLFRK
AKEKRNAYYQDDLTTAFRLFNQEGDGFGGLTVDLYGDYAVFSWYNSYVYQIRQTISEAFRQVFPEVLGAYEKIRFKGLDY
ESAHVYGQEAPDFFTVLENGVLYQVFMNDGLMTGIFLDQHEVRGSLVDGLAMGKSLLNMFSYTAAFSVAAAMGGASQTTS
VDLAKRSRELSQAHFQANGLSTDEHRFIVMDVFEYFKYAKRKNLTYDVIVLDPPSFARNKKQTFSVAKDYHKLISQSLEI
LNPGGIIIASTNAANVSRQKFTEQIDKGFAGRSYQILNKYGLPADFAYNKKDESSNYLKVISMKVSK

Sequences:

>Translated_387_residues
MNRIRVSKRVEKKLAKGLVLLEASDLENVNLKDREVEVQGQEGNFLGTAYLSQQNKGLGWFISKDKVAFNQAFFETLFRK
AKEKRNAYYQDDLTTAFRLFNQEGDGFGGLTVDLYGDYAVFSWYNSYVYQIRQTISEAFRQVFPEVLGAYEKIRFKGLDY
ESAHVYGQEAPDFFTVLENGVLYQVFMNDGLMTGIFLDQHEVRGSLVDGLAMGKSLLNMFSYTAAFSVAAAMGGASQTTS
VDLAKRSRELSQAHFQANGLSTDEHRFIVMDVFEYFKYAKRKNLTYDVIVLDPPSFARNKKQTFSVAKDYHKLISQSLEI
LNPGGIIIASTNAANVSRQKFTEQIDKGFAGRSYQILNKYGLPADFAYNKKDESSNYLKVISMKVSK
>Mature_387_residues
MNRIRVSKRVEKKLAKGLVLLEASDLENVNLKDREVEVQGQEGNFLGTAYLSQQNKGLGWFISKDKVAFNQAFFETLFRK
AKEKRNAYYQDDLTTAFRLFNQEGDGFGGLTVDLYGDYAVFSWYNSYVYQIRQTISEAFRQVFPEVLGAYEKIRFKGLDY
ESAHVYGQEAPDFFTVLENGVLYQVFMNDGLMTGIFLDQHEVRGSLVDGLAMGKSLLNMFSYTAAFSVAAAMGGASQTTS
VDLAKRSRELSQAHFQANGLSTDEHRFIVMDVFEYFKYAKRKNLTYDVIVLDPPSFARNKKQTFSVAKDYHKLISQSLEI
LNPGGIIIASTNAANVSRQKFTEQIDKGFAGRSYQILNKYGLPADFAYNKKDESSNYLKVISMKVSK

Specific function: Unknown

COG id: COG1092

COG function: function code R; Predicted SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PUA domain [H]

Homologues:

Organism=Escherichia coli, GI145693111, Length=359, Percent_Identity=26.7409470752089, Blast_Score=144, Evalue=9e-36,
Organism=Escherichia coli, GI1787181, Length=306, Percent_Identity=28.7581699346405, Blast_Score=108, Evalue=8e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002478
- InterPro:   IPR015947
- InterPro:   IPR019614 [H]

Pfam domain/function: PF10672 Methyltrans_SAM [H]

EC number: NA

Molecular weight: Translated: 43847; Mature: 43847

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRIRVSKRVEKKLAKGLVLLEASDLENVNLKDREVEVQGQEGNFLGTAYLSQQNKGLGW
CCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCEE
FISKDKVAFNQAFFETLFRKAKEKRNAYYQDDLTTAFRLFNQEGDGFGGLTVDLYGDYAV
EEECCCHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHCCCCCCCCCEEEEEECCCHH
FSWYNSYVYQIRQTISEAFRQVFPEVLGAYEKIRFKGLDYESAHVYGQEAPDFFTVLENG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHCCC
VLYQVFMNDGLMTGIFLDQHEVRGSLVDGLAMGKSLLNMFSYTAAFSVAAAMGGASQTTS
EEEEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
VDLAKRSRELSQAHFQANGLSTDEHRFIVMDVFEYFKYAKRKNLTYDVIVLDPPSFARNK
HHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHCCCEEEEEEECCCHHHCCH
KQTFSVAKDYHKLISQSLEILNPGGIIIASTNAANVSRQKFTEQIDKGFAGRSYQILNKY
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHC
GLPADFAYNKKDESSNYLKVISMKVSK
CCCCCCCCCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MNRIRVSKRVEKKLAKGLVLLEASDLENVNLKDREVEVQGQEGNFLGTAYLSQQNKGLGW
CCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCEE
FISKDKVAFNQAFFETLFRKAKEKRNAYYQDDLTTAFRLFNQEGDGFGGLTVDLYGDYAV
EEECCCHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHCCCCCCCCCEEEEEECCCHH
FSWYNSYVYQIRQTISEAFRQVFPEVLGAYEKIRFKGLDYESAHVYGQEAPDFFTVLENG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHCCC
VLYQVFMNDGLMTGIFLDQHEVRGSLVDGLAMGKSLLNMFSYTAAFSVAAAMGGASQTTS
EEEEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
VDLAKRSRELSQAHFQANGLSTDEHRFIVMDVFEYFKYAKRKNLTYDVIVLDPPSFARNK
HHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHCCCEEEEEEECCCHHHCCH
KQTFSVAKDYHKLISQSLEILNPGGIIIASTNAANVSRQKFTEQIDKGFAGRSYQILNKY
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHC
GLPADFAYNKKDESSNYLKVISMKVSK
CCCCCCCCCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]