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The map label for this gene is ywpE [H]

Identifier: 225859000

GI number: 225859000

Start: 1173946

End: 1174689

Strand: Reverse

Name: ywpE [H]

Synonym: SP70585_1265

Alternate gene names: 225859000

Gene position: 1174689-1173946 (Counterclockwise)

Preceding gene: 225859001

Following gene: 225858999

Centisome position: 53.77

GC content: 32.66

Gene sequence:

>744_bases
ATGTCTCAAAAAAATAATAAAAAGAAAAACAAGCGAAAAAATCTGCTGACAAATATCCTAGCAGGATTTCTGATATTACT
GTCACTGGCTTTGATTTTTAATACTCAAATTCGAAATATTTTCATAGTCTGGAATACCAATAAGTATCAAGTTAGCCAGG
TATCAAAAGAAAAATTAGAAGAAAATCAGGATACAGAAGGCAATTTTGACTTTGATTCTGTCAAAGCTATCTCTTCGGAA
GCTGTTCTAACTTCTCAATGGGATGCTCAAAAATTACCAGTTATTGGGGGAATTGCAATTCCTGAATTGGAAATGAATTT
GCCGATTTTTAAAGGACTTGATAATGTTAATCTCTTCTACGGAGCTGGTACAATGAAACGCGAGCAAGTAATGGGAGAAG
GAAATTATAGTCTAGCTAGTCACCATATCTTTGGTGTTGATAATGCTAATAAAATGTTATTTTCTCCTTTAGATAATGCT
AAAAATGGCATGAAGATTTATCTAACCGATAAAAATAAAGTTTATACTTATGAAATACGTGAAGTCAAACGTGTGACACC
GGATCGTGTTGATGAAGTTGATGATAGAGATGGGGTCAATGAAATCACATTAGTAACCTGTGAAGACCTTGCTGCTACAG
AACGTATTATTGTCAAAGGTGATTTGAAAGAAACAAAAGATTATTCACAAACATCTGATGAAATCCTAACAGCTTTCAAT
CAACCATATAAACAATTTTATTAA

Upstream 100 bases:

>100_bases
TGCGCCTGGATCAAGATGCTCAGATAGTGACTTTCACAACGGTTGCGGTGGCAGAAAAAGAAGAAGTTGGGACAGAAAAC
GAAACAGAAGGTGAAGCATA

Downstream 100 bases:

>100_bases
TACAAATCAGTGAAATCATGGATTTCACTGATTTTTTAAGATTTTCATAAAAATATAGTAAAATGAAATAAGAATAGGAC
GAATCGTTCAGGACAGTCAA

Product: sortase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MSQKNNKKKNKRKNLLTNILAGFLILLSLALIFNTQIRNIFIVWNTNKYQVSQVSKEKLEENQDTEGNFDFDSVKAISSE
AVLTSQWDAQKLPVIGGIAIPELEMNLPIFKGLDNVNLFYGAGTMKREQVMGEGNYSLASHHIFGVDNANKMLFSPLDNA
KNGMKIYLTDKNKVYTYEIREVKRVTPDRVDEVDDRDGVNEITLVTCEDLAATERIIVKGDLKETKDYSQTSDEILTAFN
QPYKQFY

Sequences:

>Translated_247_residues
MSQKNNKKKNKRKNLLTNILAGFLILLSLALIFNTQIRNIFIVWNTNKYQVSQVSKEKLEENQDTEGNFDFDSVKAISSE
AVLTSQWDAQKLPVIGGIAIPELEMNLPIFKGLDNVNLFYGAGTMKREQVMGEGNYSLASHHIFGVDNANKMLFSPLDNA
KNGMKIYLTDKNKVYTYEIREVKRVTPDRVDEVDDRDGVNEITLVTCEDLAATERIIVKGDLKETKDYSQTSDEILTAFN
QPYKQFY
>Mature_246_residues
SQKNNKKKNKRKNLLTNILAGFLILLSLALIFNTQIRNIFIVWNTNKYQVSQVSKEKLEENQDTEGNFDFDSVKAISSEA
VLTSQWDAQKLPVIGGIAIPELEMNLPIFKGLDNVNLFYGAGTMKREQVMGEGNYSLASHHIFGVDNANKMLFSPLDNAK
NGMKIYLTDKNKVYTYEIREVKRVTPDRVDEVDDRDGVNEITLVTCEDLAATERIIVKGDLKETKDYSQTSDEILTAFNQ
PYKQFY

Specific function: Unknown

COG id: COG3764

COG function: function code M; Sortase (surface protein transpeptidase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C60 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005754 [H]

Pfam domain/function: PF04203 Sortase [H]

EC number: NA

Molecular weight: Translated: 28133; Mature: 28002

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQKNNKKKNKRKNLLTNILAGFLILLSLALIFNTQIRNIFIVWNTNKYQVSQVSKEKLE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEHHHHHHHHHH
ENQDTEGNFDFDSVKAISSEAVLTSQWDAQKLPVIGGIAIPELEMNLPIFKGLDNVNLFY
CCCCCCCCCCHHHHHHHCCCCEEECCCCCCCCCEECCEECCCEECCCHHHCCCCCCEEEE
GAGTMKREQVMGEGNYSLASHHIFGVDNANKMLFSPLDNAKNGMKIYLTDKNKVYTYEIR
CCCCCHHHHHHCCCCCEEECEEEEECCCCCCEEECCCCCCCCCEEEEEECCCEEEEEEEH
EVKRVTPDRVDEVDDRDGVNEITLVTCEDLAATERIIVKGDLKETKDYSQTSDEILTAFN
HHHHCCCHHHHCCCCCCCCCEEEEEEECCCCCCCEEEEECCCHHHHCCCHHHHHHHHHHC
QPYKQFY
CHHHHCC
>Mature Secondary Structure 
SQKNNKKKNKRKNLLTNILAGFLILLSLALIFNTQIRNIFIVWNTNKYQVSQVSKEKLE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEHHHHHHHHHH
ENQDTEGNFDFDSVKAISSEAVLTSQWDAQKLPVIGGIAIPELEMNLPIFKGLDNVNLFY
CCCCCCCCCCHHHHHHHCCCCEEECCCCCCCCCEECCEECCCEECCCHHHCCCCCCEEEE
GAGTMKREQVMGEGNYSLASHHIFGVDNANKMLFSPLDNAKNGMKIYLTDKNKVYTYEIR
CCCCCHHHHHHCCCCCEEECEEEEECCCCCCEEECCCCCCCCCEEEEEECCCEEEEEEEH
EVKRVTPDRVDEVDDRDGVNEITLVTCEDLAATERIIVKGDLKETKDYSQTSDEILTAFN
HHHHCCCHHHHCCCCCCCCCEEEEEEECCCCCCCEEEEECCCHHHHCCCHHHHHHHHHHC
QPYKQFY
CHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]