Click here to switch to the map view.

The map label for this gene is rex [H]

Identifier: 225858903

GI number: 225858903

Start: 1065949

End: 1066590

Strand: Reverse

Name: rex [H]

Synonym: SP70585_1164

Alternate gene names: 225858903

Gene position: 1066590-1065949 (Counterclockwise)

Preceding gene: 225858904

Following gene: 225858902

Centisome position: 48.82

GC content: 42.37

Gene sequence:

>642_bases
GTGAAAGATAAACAGTTTGCTATTCCAAAAGCTACAGCAAAAAGACTCTCTCTCTACTATCGAATTTTTAAGAGATTTCA
TGCAGAAAAGATTGAACGTGCCAACTCTAAGCAAATTGCAGAGGCCATTGGGATTGATTCAGCGACCGTACGTCGTGATT
TTTCCTATTTTGGTGAACTTGGTCGTCGTGGTTTTGGCTATGATGTCAAAAAACTAATGACATTTTTTGCCGATTTGCTC
AATGACAACTCTATTACCAATGTCATGCTGGTTGGTATTGGAAATATGGGCCATGCCCTTCTCCACTACCGCTTCCACGA
ACGTAACAAGATGAAGATTATCATGGCCTTTGACCTAGACGACCATCCTGAAGTCGGTACCCAAACTCCTGACGGGATTC
CCATTTACGGGATTTCTCAGATCAAGGATAAAATCAAGGATGCTGATGTGAAGACTGCTATCCTAACTGTTCCCAGCGTC
AAGTCACAAGAGGTTGCTAATCTCTTGGTTGATGCTGGTGTGAAAGGAATTCTCAGTTTTTCACCAGTCCATCTGCATTT
ACCAAAAGACGTGGTCGTTCAGTATGTCGATTTGACAAGTGAACTCCAAACCCTCCTCTACTTCATGCGAAAAGAGGATT
AG

Upstream 100 bases:

>100_bases
TTTTTACATCAAAACTAAGATTTTTCTTAGTTTTTTCTTATTTTTGTTGATTTTTTCACAATGTTTCTATAAAATAGAAG
AATAGAAAGGTTGTGATTTT

Downstream 100 bases:

>100_bases
AAAGCGAAAATCATTTTATGAAAAAACCAGTTATTGGGATTACAGGAAACGAAAAAACTCATCCAGATGATGACATCATG
ATGAGCTACGCAGCAAAAGG

Product: redox-sensing transcriptional repressor Rex

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MKDKQFAIPKATAKRLSLYYRIFKRFHAEKIERANSKQIAEAIGIDSATVRRDFSYFGELGRRGFGYDVKKLMTFFADLL
NDNSITNVMLVGIGNMGHALLHYRFHERNKMKIIMAFDLDDHPEVGTQTPDGIPIYGISQIKDKIKDADVKTAILTVPSV
KSQEVANLLVDAGVKGILSFSPVHLHLPKDVVVQYVDLTSELQTLLYFMRKED

Sequences:

>Translated_213_residues
MKDKQFAIPKATAKRLSLYYRIFKRFHAEKIERANSKQIAEAIGIDSATVRRDFSYFGELGRRGFGYDVKKLMTFFADLL
NDNSITNVMLVGIGNMGHALLHYRFHERNKMKIIMAFDLDDHPEVGTQTPDGIPIYGISQIKDKIKDADVKTAILTVPSV
KSQEVANLLVDAGVKGILSFSPVHLHLPKDVVVQYVDLTSELQTLLYFMRKED
>Mature_213_residues
MKDKQFAIPKATAKRLSLYYRIFKRFHAEKIERANSKQIAEAIGIDSATVRRDFSYFGELGRRGFGYDVKKLMTFFADLL
NDNSITNVMLVGIGNMGHALLHYRFHERNKMKIIMAFDLDDHPEVGTQTPDGIPIYGISQIKDKIKDADVKTAILTVPSV
KSQEVANLLVDAGVKGILSFSPVHLHLPKDVVVQYVDLTSELQTLLYFMRKED

Specific function: Modulates transcription in response to changes in cellular NADH/NAD(+) redox state [H]

COG id: COG2344

COG function: function code R; AT-rich DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transcriptional regulatory rex family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003781
- InterPro:   IPR016040
- InterPro:   IPR009718
- InterPro:   IPR022876
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02629 CoA_binding; PF06971 Put_DNA-bind_N [H]

EC number: NA

Molecular weight: Translated: 24165; Mature: 24165

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDKQFAIPKATAKRLSLYYRIFKRFHAEKIERANSKQIAEAIGIDSATVRRDFSYFGEL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHH
GRRGFGYDVKKLMTFFADLLNDNSITNVMLVGIGNMGHALLHYRFHERNKMKIIMAFDLD
CCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEEEECCC
DHPEVGTQTPDGIPIYGISQIKDKIKDADVKTAILTVPSVKSQEVANLLVDAGVKGILSF
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHEEEEECCCCCHHHHHHHHHHHCHHHHHCC
SPVHLHLPKDVVVQYVDLTSELQTLLYFMRKED
CCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKDKQFAIPKATAKRLSLYYRIFKRFHAEKIERANSKQIAEAIGIDSATVRRDFSYFGEL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHH
GRRGFGYDVKKLMTFFADLLNDNSITNVMLVGIGNMGHALLHYRFHERNKMKIIMAFDLD
CCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEEEECCC
DHPEVGTQTPDGIPIYGISQIKDKIKDADVKTAILTVPSVKSQEVANLLVDAGVKGILSF
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHEEEEECCCCCHHHHHHHHHHHCHHHHHCC
SPVHLHLPKDVVVQYVDLTSELQTLLYFMRKED
CCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA