Click here to switch to the map view.

The map label for this gene is flaF

Identifier: 225686882

GI number: 225686882

Start: 1101788

End: 1102132

Strand: Reverse

Name: flaF

Synonym: BMEA_B1130

Alternate gene names: NA

Gene position: 1102132-1101788 (Counterclockwise)

Preceding gene: 225686883

Following gene: 225686881

Centisome position: 92.97

GC content: 54.2

Gene sequence:

>345_bases
ATGTATCAGTTGCGCTACGAAGATGTCATGAATGACGATATGGCGAGCGCCAAGGAACGCGAGCGGATGCTTTTCGACCG
CTCCATTGCGATGCTCGAAGCGGCGAGGGCAAATGGAGCCGAATCGCGCGAGGGGATCGATGCTGCCTATTTCACTTCAA
AACTCTGGACGACGATCATCGATGATCTGGGATCGGAGGAAAACGCCCTGCCGAAAGAATTGCGGGCGGCGATCATTTCC
ATCGGCATCTTCGTGCTGAAGGAGATTGAACGTATCCGCCAGGGTGAGAGCAATGATTATGCAACGCTGATCGAGATCAC
CCAGTCGATTCGGGACGGGCTTTGA

Upstream 100 bases:

>100_bases
GCTATATCGGCGCCTCCCCCGACGCTGGGCCGCTCTATCCGGAAACAAGGGCGGCCGCATGATGCGAACCCGCCGAAGAT
GCTGAACAAGCGGAGACGAT

Downstream 100 bases:

>100_bases
GATGGCGGCGAACAGCAAAACGGCAATCCGGCTGTCGCTGAGGGCAGGGGAGCGGATTTTCATCAATGGCGCGGTTCTGA
GGGCCGACCGCAAGGTCTCG

Product: flagellar biosynthesis regulatory protein FlaF

Products: NA

Alternate protein names: Flagellar FlaF Family Protein; Flagellar Protein FlaF; Flagellar FlaF; Flagellin Synthesis Regulator Protein

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MYQLRYEDVMNDDMASAKERERMLFDRSIAMLEAARANGAESREGIDAAYFTSKLWTTIIDDLGSEENALPKELRAAIIS
IGIFVLKEIERIRQGESNDYATLIEITQSIRDGL

Sequences:

>Translated_114_residues
MYQLRYEDVMNDDMASAKERERMLFDRSIAMLEAARANGAESREGIDAAYFTSKLWTTIIDDLGSEENALPKELRAAIIS
IGIFVLKEIERIRQGESNDYATLIEITQSIRDGL
>Mature_114_residues
MYQLRYEDVMNDDMASAKERERMLFDRSIAMLEAARANGAESREGIDAAYFTSKLWTTIIDDLGSEENALPKELRAAIIS
IGIFVLKEIERIRQGESNDYATLIEITQSIRDGL

Specific function: Unknown

COG id: COG5442

COG function: function code N; Flagellar biosynthesis regulator FlaF

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12951; Mature: 12951

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYQLRYEDVMNDDMASAKERERMLFDRSIAMLEAARANGAESREGIDAAYFTSKLWTTII
CCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
DDLGSEENALPKELRAAIISIGIFVLKEIERIRQGESNDYATLIEITQSIRDGL
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYQLRYEDVMNDDMASAKERERMLFDRSIAMLEAARANGAESREGIDAAYFTSKLWTTII
CCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
DDLGSEENALPKELRAAIISIGIFVLKEIERIRQGESNDYATLIEITQSIRDGL
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA