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The map label for this gene is fliR [H]

Identifier: 225686878

GI number: 225686878

Start: 1097606

End: 1098373

Strand: Reverse

Name: fliR [H]

Synonym: BMEA_B1125

Alternate gene names: 225686878

Gene position: 1098373-1097606 (Counterclockwise)

Preceding gene: 225686879

Following gene: 225686877

Centisome position: 92.65

GC content: 55.73

Gene sequence:

>768_bases
TTGCCTGTCACGCAACTGCCGCTCAACGAAATCATCCTGGCCGCCGTGCTGGCGTTTTGCCGCATTGGCGCATGTCTCAT
GCTGATGCCGGGAATTTCAAGCGCGCGCATTCCGTTGCAGGTTCGCCTGTTCATTGCGCTCGCCTGCTCATTTGCCGTGC
TGCTGCTTGTTCTTCAGCGCATCGTGACGGCAGTGGATGCGGGACAGCCTTGGACGCTGTTTCGCCTGATGGTGGGTGAA
ATGTTCATCGGTGCGCTGATCGGCATTCTGGCGCATATTTATTTCTGGGCGCTGCAATTCATGGCGAACATGATGGCGAT
GGCGGTTGGCTATTCCGGTTCGCCTGCCGATTCGATTACGGAAAACGAGCCGCAGGCAACCCTTGCGACCATCGTGACTT
TCAGCGCGCTGTTTCTGTTTTTCGTGACCGATATGCATCTGGAAATATTCCGGGCGCTGCTCAATTCTTACGTGGCAATC
CCCGTCGATGGCCGGTTTCGGCCGGATGCGGCGATGATCGATTTTACCGATGCGCTTTCAGCGGCCTTTCTGGCGACTTT
GCGTATAGCCGCGCCCTTTATCGTCTTTGCCATTCTGGTGAATTTCGCAATCGGCCTCGTCAACAAGCTGACACCTGCGA
TCCCGGTCTATTTCATCTCCATGCCTTTTGTCCTGGGGGGAGGGCTGCTGGTGGTCTATTTCATCCTGCCGGAGCTTCTG
CGCTTTTTCACGCATGAAACCGCAACCCAGTTGCGCGAACTTTTCTGA

Upstream 100 bases:

>100_bases
ACGCCTGTTCGCCACGCTGCCCGTGCTTTCGCATGTCGAAATCGCCCGTGGCGTGGAGGTGAAATCGCTCGGCGCGATTT
CCTGACCGGGAGAGACCCCG

Downstream 100 bases:

>100_bases
GGGCGACATGACGCAGGCTGGAACACGCAATCTGAGGAAACTGGTGGAACTGCAAAAGCTTGGCTGTGCGCGGCACGAAG
CAGCACTTGCCATCGCAAAT

Product: flagellar biosynthesis protein FliR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MPVTQLPLNEIILAAVLAFCRIGACLMLMPGISSARIPLQVRLFIALACSFAVLLLVLQRIVTAVDAGQPWTLFRLMVGE
MFIGALIGILAHIYFWALQFMANMMAMAVGYSGSPADSITENEPQATLATIVTFSALFLFFVTDMHLEIFRALLNSYVAI
PVDGRFRPDAAMIDFTDALSAAFLATLRIAAPFIVFAILVNFAIGLVNKLTPAIPVYFISMPFVLGGGLLVVYFILPELL
RFFTHETATQLRELF

Sequences:

>Translated_255_residues
MPVTQLPLNEIILAAVLAFCRIGACLMLMPGISSARIPLQVRLFIALACSFAVLLLVLQRIVTAVDAGQPWTLFRLMVGE
MFIGALIGILAHIYFWALQFMANMMAMAVGYSGSPADSITENEPQATLATIVTFSALFLFFVTDMHLEIFRALLNSYVAI
PVDGRFRPDAAMIDFTDALSAAFLATLRIAAPFIVFAILVNFAIGLVNKLTPAIPVYFISMPFVLGGGLLVVYFILPELL
RFFTHETATQLRELF
>Mature_254_residues
PVTQLPLNEIILAAVLAFCRIGACLMLMPGISSARIPLQVRLFIALACSFAVLLLVLQRIVTAVDAGQPWTLFRLMVGEM
FIGALIGILAHIYFWALQFMANMMAMAVGYSGSPADSITENEPQATLATIVTFSALFLFFVTDMHLEIFRALLNSYVAIP
VDGRFRPDAAMIDFTDALSAAFLATLRIAAPFIVFAILVNFAIGLVNKLTPAIPVYFISMPFVLGGGLLVVYFILPELLR
FFTHETATQLRELF

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1684

COG function: function code NU; Flagellar biosynthesis pathway, component FliR

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006303
- InterPro:   IPR002010 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 27990; Mature: 27859

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVTQLPLNEIILAAVLAFCRIGACLMLMPGISSARIPLQVRLFIALACSFAVLLLVLQR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IVTAVDAGQPWTLFRLMVGEMFIGALIGILAHIYFWALQFMANMMAMAVGYSGSPADSIT
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
ENEPQATLATIVTFSALFLFFVTDMHLEIFRALLNSYVAIPVDGRFRPDAAMIDFTDALS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHH
AAFLATLRIAAPFIVFAILVNFAIGLVNKLTPAIPVYFISMPFVLGGGLLVVYFILPELL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFFTHETATQLRELF
HHHHHHHHHHHHHHC
>Mature Secondary Structure 
PVTQLPLNEIILAAVLAFCRIGACLMLMPGISSARIPLQVRLFIALACSFAVLLLVLQR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IVTAVDAGQPWTLFRLMVGEMFIGALIGILAHIYFWALQFMANMMAMAVGYSGSPADSIT
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
ENEPQATLATIVTFSALFLFFVTDMHLEIFRALLNSYVAIPVDGRFRPDAAMIDFTDALS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHH
AAFLATLRIAAPFIVFAILVNFAIGLVNKLTPAIPVYFISMPFVLGGGLLVVYFILPELL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFFTHETATQLRELF
HHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7814323; 11259647 [H]