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The map label for this gene is yoaB [C]

Identifier: 225686774

GI number: 225686774

Start: 987586

End: 987930

Strand: Reverse

Name: yoaB [C]

Synonym: BMEA_B1005

Alternate gene names: 225686774

Gene position: 987930-987586 (Counterclockwise)

Preceding gene: 225686782

Following gene: 225686771

Centisome position: 83.33

GC content: 60.58

Gene sequence:

>345_bases
ATGAGCATCCGTCGTATCGAAGCCGGCCCGCGCATGAGCCAGGCCGTCATCCACGGCAACACCGCCTATCTCGCCGGTCA
GGTGGGGAATCCGGGCGCGAGCGTCACCGAACAGACCAAGGCCGTTCTGGCTGAGGTGGAGCGTCTTCTCAAGGAAGTGG
GTTCCGACAAGACGAAGATCCTTCAGGCTATCATCTGGCTTGCCGATATGAAGGATTTTGCCGAAATGAACGCCGTCTGG
GACGCCTGGGTCGATCCGGCTCATACGCCTGCCCGCGCGACCGGCGAAGCCAAGCTTGCAACGCCCGACTACAAGGTTGA
AATCATCATCACCGCTGCGGTCTGA

Upstream 100 bases:

>100_bases
TAGAGTGGGCATTGCCAAAGCAGGCGAGGGCTTTAATAAGGATGCGCAACGTTTTCACATGCGGGACTGTTTCCGCAGCA
GCATTGAGAGGAGTTCACCC

Downstream 100 bases:

>100_bases
TCGGTTTCCCATCCTTCTTGAAGCCCTGCCGGAGCAACTGCACCGGCGGGGTTTTATTCGCGGATGCGCTGCGAATAGTC
TTCGCGCCCACTCGCCTGCG

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MSIRRIEAGPRMSQAVIHGNTAYLAGQVGNPGASVTEQTKAVLAEVERLLKEVGSDKTKILQAIIWLADMKDFAEMNAVW
DAWVDPAHTPARATGEAKLATPDYKVEIIITAAV

Sequences:

>Translated_114_residues
MSIRRIEAGPRMSQAVIHGNTAYLAGQVGNPGASVTEQTKAVLAEVERLLKEVGSDKTKILQAIIWLADMKDFAEMNAVW
DAWVDPAHTPARATGEAKLATPDYKVEIIITAAV
>Mature_113_residues
SIRRIEAGPRMSQAVIHGNTAYLAGQVGNPGASVTEQTKAVLAEVERLLKEVGSDKTKILQAIIWLADMKDFAEMNAVWD
AWVDPAHTPARATGEAKLATPDYKVEIIITAAV

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI87081979, Length=114, Percent_Identity=50.8771929824561, Blast_Score=109, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 12300; Mature: 12169

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIRRIEAGPRMSQAVIHGNTAYLAGQVGNPGASVTEQTKAVLAEVERLLKEVGSDKTKI
CCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
LQAIIWLADMKDFAEMNAVWDAWVDPAHTPARATGEAKLATPDYKVEIIITAAV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCEEEEEEEEECC
>Mature Secondary Structure 
SIRRIEAGPRMSQAVIHGNTAYLAGQVGNPGASVTEQTKAVLAEVERLLKEVGSDKTKI
CCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
LQAIIWLADMKDFAEMNAVWDAWVDPAHTPARATGEAKLATPDYKVEIIITAAV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]