Click here to switch to the map view.

The map label for this gene is dap [H]

Identifier: 225686708

GI number: 225686708

Start: 913744

End: 915300

Strand: Direct

Name: dap [H]

Synonym: BMEA_B0933

Alternate gene names: 225686708

Gene position: 913744-915300 (Clockwise)

Preceding gene: 225686707

Following gene: 225686711

Centisome position: 77.08

GC content: 60.05

Gene sequence:

>1557_bases
ATGCCCAATATTGATCTCCCCACGCTTGAAGCATTCGTTCACGCCATTCCGCAAAATTACAAAGGACCGGGCGGTGCAGT
AGCCGTGGTCAGGAACGGTGAGATCGTGTTGCGCCATGCATGGGGCTTCGCCGATCTTGCAGCCCGCAAGGCCATGACGC
CTGAAACACGGATGCCCATCTGCTCGGTCAGCAAGCAATTCACCTGCGCCGTCCTTCTCGACTGCATAGGTGAGCCGGAG
ATGCTGGACAGTGCGCTCGCCGCCTATCTCGACCAATTCGAGGACGGGCGCCCAGCCGTGCGTGACCTTTGCAACAACCA
GTCGGGCCTGCGCGATTATTGGGCGCTGACGGTTCTTTGCGGGGCCGCCCCGGAAGGCATCTTCCTGCCCGATCAGGCGC
AAAACCTGTTGCGCCGCCTGAAAACCACCCATTTCGCACCCGGCACACATTATTCCTATTGCAACGGCAATTTCCGCATT
CTGGCCGACCTTATCGAGCAGCATACGGGCCGGTCTCTCGCTGACCTTCTGGCAGAGCGCATTTTCGCGCCCGCGGCCAT
GAAGACGGCAGAACTCATTCCCGATACCGCGCTTTTCAATGAATGCACCGGCTATGAGGGCGATACGGTGCGCGGCTTCC
TGCCCGCCATCAACCGCATCCACTGGCTAGGCGATGCGGGCATCTGCGCCTCGCTGGACGATATGATTGCCTGGGAACAA
TTCATCGACCGGACGCGACATGATGAAAACGGCCTCTATCGCCGCCTGAGCAGTCCGCAGACATTCGCGGACGGTGCACC
CGCCCCTTATGGCTTCGGCCTCAAATTCGAGGAAACAGGCGGAAAACGGCTCACCGGCCATGGCGGCGCACTGCGCGGCT
GGCGCTGCCAGCGGTGGCATTGCGCAGACGAGCGCATATCCACCATTGTCATGTTCAACTTTGAAGGCAACGCTTCCGAT
GCCGCCCTCAAGATGATGAATGCGGCACTTGGCATCCCCCCAGCCAAGCCCGTGCGCGCGCAAGCCAATCCGGGATGGTT
CGGCTCCTGGCTCAACCCTGAAACCGGCCTTGTTCTAAGCCTCGAAGACGCTGGCGGCGGACGCATGAAAGCCCGTTTCG
GCACCGGCCCGGAAAAAATGGATATATCGGGCGAAAACGAAGCACAGTCTTCCATGACGACGCTGCGGCGTGACGGCGAC
ATGATCCATCTTGCGCGCAAAGATGAAAACCTGCACCTTGCGATGCATCGCCTCAAGGGCAAGGCAAGGCAGGATATTGC
AGGGCGTTATCGCAGCGACGAGCTAGAAGCCGATCTCCTGCTCGTCAGCGAAGGCGGAGCAATCTATGGCGCCTTTGAAG
GATTTCTCGGCAAAAGCGATATGTACCCGCTTTATGCGGCAGGGCCGGATGTCTGGCTGCTCCCGGTACAGCGTTCCATG
GATGCGCCCTCCCCCGGCGAATGGAAGCTTGTCTTCCACCGCGATGCAGCAGGCAGGATAACCGGCGTCACGGTCGGCTG
CTGGCTGGCACGCGGTGTTGAATACAAACGCCTGTGA

Upstream 100 bases:

>100_bases
TCTTCAAACTATACAATCCGCGTACGGCCATCGCCTTGATCGAACGGTTAAAATAACGCTCCAGGGCAGCCATTGATCTA
TCAGAATCGCCAGAATCATC

Downstream 100 bases:

>100_bases
TATGTTTAAAGCGAGGGCGCATCCCGCCGATTATTTGACCGGCGGGGCGTACATCAGCCCACCCTTGTTCCAGAGCGCAT
TGATACCCCGGTTGATCTTG

Product: D-aminopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 518; Mature: 517

Protein sequence:

>518_residues
MPNIDLPTLEAFVHAIPQNYKGPGGAVAVVRNGEIVLRHAWGFADLAARKAMTPETRMPICSVSKQFTCAVLLDCIGEPE
MLDSALAAYLDQFEDGRPAVRDLCNNQSGLRDYWALTVLCGAAPEGIFLPDQAQNLLRRLKTTHFAPGTHYSYCNGNFRI
LADLIEQHTGRSLADLLAERIFAPAAMKTAELIPDTALFNECTGYEGDTVRGFLPAINRIHWLGDAGICASLDDMIAWEQ
FIDRTRHDENGLYRRLSSPQTFADGAPAPYGFGLKFEETGGKRLTGHGGALRGWRCQRWHCADERISTIVMFNFEGNASD
AALKMMNAALGIPPAKPVRAQANPGWFGSWLNPETGLVLSLEDAGGGRMKARFGTGPEKMDISGENEAQSSMTTLRRDGD
MIHLARKDENLHLAMHRLKGKARQDIAGRYRSDELEADLLLVSEGGAIYGAFEGFLGKSDMYPLYAAGPDVWLLPVQRSM
DAPSPGEWKLVFHRDAAGRITGVTVGCWLARGVEYKRL

Sequences:

>Translated_518_residues
MPNIDLPTLEAFVHAIPQNYKGPGGAVAVVRNGEIVLRHAWGFADLAARKAMTPETRMPICSVSKQFTCAVLLDCIGEPE
MLDSALAAYLDQFEDGRPAVRDLCNNQSGLRDYWALTVLCGAAPEGIFLPDQAQNLLRRLKTTHFAPGTHYSYCNGNFRI
LADLIEQHTGRSLADLLAERIFAPAAMKTAELIPDTALFNECTGYEGDTVRGFLPAINRIHWLGDAGICASLDDMIAWEQ
FIDRTRHDENGLYRRLSSPQTFADGAPAPYGFGLKFEETGGKRLTGHGGALRGWRCQRWHCADERISTIVMFNFEGNASD
AALKMMNAALGIPPAKPVRAQANPGWFGSWLNPETGLVLSLEDAGGGRMKARFGTGPEKMDISGENEAQSSMTTLRRDGD
MIHLARKDENLHLAMHRLKGKARQDIAGRYRSDELEADLLLVSEGGAIYGAFEGFLGKSDMYPLYAAGPDVWLLPVQRSM
DAPSPGEWKLVFHRDAAGRITGVTVGCWLARGVEYKRL
>Mature_517_residues
PNIDLPTLEAFVHAIPQNYKGPGGAVAVVRNGEIVLRHAWGFADLAARKAMTPETRMPICSVSKQFTCAVLLDCIGEPEM
LDSALAAYLDQFEDGRPAVRDLCNNQSGLRDYWALTVLCGAAPEGIFLPDQAQNLLRRLKTTHFAPGTHYSYCNGNFRIL
ADLIEQHTGRSLADLLAERIFAPAAMKTAELIPDTALFNECTGYEGDTVRGFLPAINRIHWLGDAGICASLDDMIAWEQF
IDRTRHDENGLYRRLSSPQTFADGAPAPYGFGLKFEETGGKRLTGHGGALRGWRCQRWHCADERISTIVMFNFEGNASDA
ALKMMNAALGIPPAKPVRAQANPGWFGSWLNPETGLVLSLEDAGGGRMKARFGTGPEKMDISGENEAQSSMTTLRRDGDM
IHLARKDENLHLAMHRLKGKARQDIAGRYRSDELEADLLLVSEGGAIYGAFEGFLGKSDMYPLYAAGPDVWLLPVQRSMD
APSPGEWKLVFHRDAAGRITGVTVGCWLARGVEYKRL

Specific function: Hydrolyzes N-terminal residues in D-amino acid- containing peptides [H]

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466
- InterPro:   IPR009090
- InterPro:   IPR012856
- InterPro:   IPR012857 [H]

Pfam domain/function: PF00144 Beta-lactamase; PF07930 DAP_B; PF07932 DAP_C [H]

EC number: =3.4.11.19 [H]

Molecular weight: Translated: 56887; Mature: 56756

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNIDLPTLEAFVHAIPQNYKGPGGAVAVVRNGEIVLRHAWGFADLAARKAMTPETRMPI
CCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEECCCHHHHHHHHCCCCCCCCCH
CSVSKQFTCAVLLDCIGEPEMLDSALAAYLDQFEDGRPAVRDLCNNQSGLRDYWALTVLC
HHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHH
GAAPEGIFLPDQAQNLLRRLKTTHFAPGTHYSYCNGNFRILADLIEQHTGRSLADLLAER
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHCCCHHHHHHHHH
IFAPAAMKTAELIPDTALFNECTGYEGDTVRGFLPAINRIHWLGDAGICASLDDMIAWEQ
HHCCHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHEEECCCCCCHHHHHHHHHHHH
FIDRTRHDENGLYRRLSSPQTFADGAPAPYGFGLKFEETGGKRLTGHGGALRGWRCQRWH
HHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCC
CADERISTIVMFNFEGNASDAALKMMNAALGIPPAKPVRAQANPGWFGSWLNPETGLVLS
CCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
LEDAGGGRMKARFGTGPEKMDISGENEAQSSMTTLRRDGDMIHLARKDENLHLAMHRLKG
EECCCCCEEEEECCCCCCCEECCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCC
KARQDIAGRYRSDELEADLLLVSEGGAIYGAFEGFLGKSDMYPLYAAGPDVWLLPVQRSM
HHHHHHHCCCCCCCCCEEEEEEECCCEEEEEHHHHCCCCCCCEEEECCCCEEEEECHHCC
DAPSPGEWKLVFHRDAAGRITGVTVGCWLARGVEYKRL
CCCCCCCEEEEEEECCCCCEEEEEHHHHHHCCCCCCCC
>Mature Secondary Structure 
PNIDLPTLEAFVHAIPQNYKGPGGAVAVVRNGEIVLRHAWGFADLAARKAMTPETRMPI
CCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEECCCHHHHHHHHCCCCCCCCCH
CSVSKQFTCAVLLDCIGEPEMLDSALAAYLDQFEDGRPAVRDLCNNQSGLRDYWALTVLC
HHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHH
GAAPEGIFLPDQAQNLLRRLKTTHFAPGTHYSYCNGNFRILADLIEQHTGRSLADLLAER
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHCCCHHHHHHHHH
IFAPAAMKTAELIPDTALFNECTGYEGDTVRGFLPAINRIHWLGDAGICASLDDMIAWEQ
HHCCHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHEEECCCCCCHHHHHHHHHHHH
FIDRTRHDENGLYRRLSSPQTFADGAPAPYGFGLKFEETGGKRLTGHGGALRGWRCQRWH
HHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCC
CADERISTIVMFNFEGNASDAALKMMNAALGIPPAKPVRAQANPGWFGSWLNPETGLVLS
CCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
LEDAGGGRMKARFGTGPEKMDISGENEAQSSMTTLRRDGDMIHLARKDENLHLAMHRLKG
EECCCCCEEEEECCCCCCCEECCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCC
KARQDIAGRYRSDELEADLLLVSEGGAIYGAFEGFLGKSDMYPLYAAGPDVWLLPVQRSM
HHHHHHHCCCCCCCCCEEEEEEECCCEEEEEHHHHCCCCCCCEEEECCCCEEEEECHHCC
DAPSPGEWKLVFHRDAAGRITGVTVGCWLARGVEYKRL
CCCCCCCEEEEEEECCCCCEEEEEHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA