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The map label for this gene is xylH [H]

Identifier: 225686695

GI number: 225686695

Start: 900772

End: 901962

Strand: Reverse

Name: xylH [H]

Synonym: BMEA_B0919

Alternate gene names: 225686695

Gene position: 901962-900772 (Counterclockwise)

Preceding gene: 225686696

Following gene: 225686689

Centisome position: 76.08

GC content: 57.09

Gene sequence:

>1191_bases
ATGAGCGAGAATGTAATCCAGAGCGGCCAGCAGAGCAGCGTGGGGCGCTATCTCAAGAACAATCTGCGTGAATCCGGGAT
GCTGCTTTCGCTCGTTGCAATCATGATCTTCTTCCATATCGTGACCGGCGGCGTTCTCATGAAGCCGCTGAACCTCACCA
ATCTCGTTTTGCAGAACAGCTATATCGTCATCATGGCGCTTGGAATGCTGCTCATCATCGTCACGGGCCATATCGATCTT
TCGGTCGGTTCGGTCTGCGGCTTTATCGGGGCGCTCGCTGCCGTCATGATGGTAAAGCTCGGCATTCCCTTTCCCATTGC
GGCCATTCTCTGCCTCATTGTCGGCGGGTTGATCGGCGCGATCCAGGGTTTTTGGGTCGCCTATTTCAATATCCCCTCCT
TCATTGTGACATTGGCCGGTATGCTCGTGTTCAAGGGGCTGATGCTTGCCGTTCTGGGCGGACAGTCGGTCGGACCTTTT
CCGGTCGTGTTCCAGAAGCTCTCGTCGGGCTTCATTCCAGAGGTGATCGGCACGTTTGACGGCGTTTATCTCACCTCGCT
CATCATCGGCGTTCTGCTTGCGGTTTTCCTCATCTGGCAGAGCATGCGGTCGCGCGCGCGCCATATTGCCCATGAGGTGG
AGACCGAGCCCTTCGGCCTTTTCGTGGTCAAGTGCATCCTCTATTTCGTCGCAATTGCCTATCTTTCGCTGCTCATTTCC
TCACATCGCGGTATGCCGAACGTACTCATCATCATGGCGGTGCTGATTGCCGCCTATGCGTTTCTCACCAATCGCACCGT
GATCGGCCGCCAGATCTATGCGGTGGGCGGCAATCGTCACGCCGCCAAGCTTTCCGGCGTGAAAACCGAGCGGCTGACGT
TTCTCACCTTCGTCAATATGGGTGTGCTGGCAGCACTTGCGGGTCTCGTCTTCGCCGCCTGTCTCAATACGGCGACGCCG
AAAGCTGGCATCGGCTTTGAACTGGACGTCATCGCGGCCTGCTTCATCGGTGGCGCTTCGGCCTATGGCGGCGTGGGGCG
GGTTACGGGTGCCGTGATCGGCGCGCTCATCATGGGCGTGATGAACAACGGCATGTCGATCCTCGGCATCGGTATCGACT
ATCAGCAGGTCATCAAGGGTATCGTGCTGCTGGGGGCGGTTTGTATCGACGTCTATAACCAGAAACGCTGA

Upstream 100 bases:

>100_bases
TCGTCATGCATGAGGGCGCCTTCGTCGGCGAAGTGGCAGGCGAGGAAGCAACGCAGGAAAACATCATGCGCGCCATCATG
CGAAACACGGGAAAAGGGTA

Downstream 100 bases:

>100_bases
TATTTCGGCTTGCCATAACCAAGTCTCAGAGCGGTTCCGGTTAAAACGGAACCGCTCTAACGATTTGTTTTGTCGCATTA
TCCTACGCGACGCTTATCCC

Product: monosaccharide-transporting ATPase

Products: ADP; phosphate; xylose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 395

Protein sequence:

>396_residues
MSENVIQSGQQSSVGRYLKNNLRESGMLLSLVAIMIFFHIVTGGVLMKPLNLTNLVLQNSYIVIMALGMLLIIVTGHIDL
SVGSVCGFIGALAAVMMVKLGIPFPIAAILCLIVGGLIGAIQGFWVAYFNIPSFIVTLAGMLVFKGLMLAVLGGQSVGPF
PVVFQKLSSGFIPEVIGTFDGVYLTSLIIGVLLAVFLIWQSMRSRARHIAHEVETEPFGLFVVKCILYFVAIAYLSLLIS
SHRGMPNVLIIMAVLIAAYAFLTNRTVIGRQIYAVGGNRHAAKLSGVKTERLTFLTFVNMGVLAALAGLVFAACLNTATP
KAGIGFELDVIAACFIGGASAYGGVGRVTGAVIGALIMGVMNNGMSILGIGIDYQQVIKGIVLLGAVCIDVYNQKR

Sequences:

>Translated_396_residues
MSENVIQSGQQSSVGRYLKNNLRESGMLLSLVAIMIFFHIVTGGVLMKPLNLTNLVLQNSYIVIMALGMLLIIVTGHIDL
SVGSVCGFIGALAAVMMVKLGIPFPIAAILCLIVGGLIGAIQGFWVAYFNIPSFIVTLAGMLVFKGLMLAVLGGQSVGPF
PVVFQKLSSGFIPEVIGTFDGVYLTSLIIGVLLAVFLIWQSMRSRARHIAHEVETEPFGLFVVKCILYFVAIAYLSLLIS
SHRGMPNVLIIMAVLIAAYAFLTNRTVIGRQIYAVGGNRHAAKLSGVKTERLTFLTFVNMGVLAALAGLVFAACLNTATP
KAGIGFELDVIAACFIGGASAYGGVGRVTGAVIGALIMGVMNNGMSILGIGIDYQQVIKGIVLLGAVCIDVYNQKR
>Mature_395_residues
SENVIQSGQQSSVGRYLKNNLRESGMLLSLVAIMIFFHIVTGGVLMKPLNLTNLVLQNSYIVIMALGMLLIIVTGHIDLS
VGSVCGFIGALAAVMMVKLGIPFPIAAILCLIVGGLIGAIQGFWVAYFNIPSFIVTLAGMLVFKGLMLAVLGGQSVGPFP
VVFQKLSSGFIPEVIGTFDGVYLTSLIIGVLLAVFLIWQSMRSRARHIAHEVETEPFGLFVVKCILYFVAIAYLSLLISS
HRGMPNVLIIMAVLIAAYAFLTNRTVIGRQIYAVGGNRHAAKLSGVKTERLTFLTFVNMGVLAALAGLVFAACLNTATPK
AGIGFELDVIAACFIGGASAYGGVGRVTGAVIGALIMGVMNNGMSILGIGIDYQQVIKGIVLLGAVCIDVYNQKR

Specific function: Part of the binding-protein-dependent transport system for D-xylose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4214

COG function: function code G; ABC-type xylose transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789992, Length=380, Percent_Identity=39.2105263157895, Blast_Score=241, Evalue=6e-65,
Organism=Escherichia coli, GI1790191, Length=153, Percent_Identity=43.1372549019608, Blast_Score=129, Evalue=3e-31,
Organism=Escherichia coli, GI145693152, Length=163, Percent_Identity=36.8098159509202, Blast_Score=114, Evalue=8e-27,
Organism=Escherichia coli, GI1790524, Length=164, Percent_Identity=39.6341463414634, Blast_Score=109, Evalue=3e-25,
Organism=Escherichia coli, GI1788896, Length=153, Percent_Identity=38.562091503268, Blast_Score=109, Evalue=3e-25,
Organism=Escherichia coli, GI1787793, Length=137, Percent_Identity=37.956204379562, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87082395, Length=103, Percent_Identity=41.747572815534, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1788471, Length=135, Percent_Identity=40, Blast_Score=68, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 41937; Mature: 41806

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SENVIQSGQQSSVGRYLKNNLRESGMLLSLVAIMIFFHIVTGGVLMKPLNLTNLVLQNS
CCCHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHCC
YIVIMALGMLLIIVTGHIDLSVGSVCGFIGALAAVMMVKLGIPFPIAAILCLIVGGLIGA
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
IQGFWVAYFNIPSFIVTLAGMLVFKGLMLAVLGGQSVGPFPVVFQKLSSGFIPEVIGTFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHH
GVYLTSLIIGVLLAVFLIWQSMRSRARHIAHEVETEPFGLFVVKCILYFVAIAYLSLLIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
SHRGMPNVLIIMAVLIAAYAFLTNRTVIGRQIYAVGGNRHAAKLSGVKTERLTFLTFVNM
HCCCCCHHHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCCHHHHCCCCHHHHHHHHHHHH
GVLAALAGLVFAACLNTATPKAGIGFELDVIAACFIGGASAYGGVGRVTGAVIGALIMGV
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHH
MNNGMSILGIGIDYQQVIKGIVLLGAVCIDVYNQKR
HHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; xylose [Periplasm]; H2O [C]

Specific reaction: ATP + xylose [Periplasm] + H2O = ADP + phosphate + xylose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]