Click here to switch to the map view.

The map label for this gene is ahpD [H]

Identifier: 225686480

GI number: 225686480

Start: 666032

End: 666661

Strand: Reverse

Name: ahpD [H]

Synonym: BMEA_B0681

Alternate gene names: 225686480

Gene position: 666661-666032 (Counterclockwise)

Preceding gene: 225686481

Following gene: 225686478

Centisome position: 56.23

GC content: 54.92

Gene sequence:

>630_bases
ATGTCGATTGACGACCTGAAATCAAAAATCCCGGATTTCGCCAAGGATGTCCGTCTCAATCTTTCTTCCATGGCAAGCGA
CGAGACACTGACGCCGCAGCAGAAATATGGCCTGTTTGTCGCCTGCGGCATCGCTTCGCGCAATGCCGATGTGCGCAAGG
CACTTGTTGCCGAAGCTGCCGGGAAGGTTGACGCCTCCGTCATTCAGGCTGCAAAGGCAGCCGCATCGATCATGGGCATG
AACAATGTCTATTATCGCTTCGTGCATCTGGCATCCAACAAGGATTACCGCACCATGCCAGCCCGGCTGCGCATGAATGT
CATCAGCAATCCCGGCGTTGACAAGGTTGATTTTGAACTGTGGTCGCTGGCCGTGTCTGCCATCAATGGCTGCGGCATGT
GCATCGACGCACATGAAGATGTGCTGCGCAAGGCCAATGTCACGGCGGAAGCGATACAGGCAGCCGTGCGCTTTGCCTCG
ATCATCCAGTCGGCCGCATTGCTCTTGAAGCTGCCGACACCGAATAAGCGATCCGTTTTGATCCCGGATAAAAAGCCCGC
GCGGAGCAATCCGCGCGGGCTTTTTGATGGCTGGTCTGAAAAGGCTATTTCTTGTCTTTCAGCGTTATGA

Upstream 100 bases:

>100_bases
GAGACGCTCAAGGCAGCCTGATCGGCTATGACAATGGCGTGTGAGGCGGGTTCAGGCCCGCCTTTCTTTTATCCTGTTTC
AAAGACATAATGAGGGTTCC

Downstream 100 bases:

>100_bases
AGACAAAGCCGATCAGCGAAATGATTGCCGCTGCCACCATGTAATAGCCGACATAGGCAAAGCCGTAATCGGTGGCGAGC
CAGGTGGCGATATAGGGGGC

Product: alkylhydroperoxidase

Products: NA

Alternate protein names: Alkylhydroperoxidase AhpD [H]

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MSIDDLKSKIPDFAKDVRLNLSSMASDETLTPQQKYGLFVACGIASRNADVRKALVAEAAGKVDASVIQAAKAAASIMGM
NNVYYRFVHLASNKDYRTMPARLRMNVISNPGVDKVDFELWSLAVSAINGCGMCIDAHEDVLRKANVTAEAIQAAVRFAS
IIQSAALLLKLPTPNKRSVLIPDKKPARSNPRGLFDGWSEKAISCLSAL

Sequences:

>Translated_209_residues
MSIDDLKSKIPDFAKDVRLNLSSMASDETLTPQQKYGLFVACGIASRNADVRKALVAEAAGKVDASVIQAAKAAASIMGM
NNVYYRFVHLASNKDYRTMPARLRMNVISNPGVDKVDFELWSLAVSAINGCGMCIDAHEDVLRKANVTAEAIQAAVRFAS
IIQSAALLLKLPTPNKRSVLIPDKKPARSNPRGLFDGWSEKAISCLSAL
>Mature_208_residues
SIDDLKSKIPDFAKDVRLNLSSMASDETLTPQQKYGLFVACGIASRNADVRKALVAEAAGKVDASVIQAAKAAASIMGMN
NVYYRFVHLASNKDYRTMPARLRMNVISNPGVDKVDFELWSLAVSAINGCGMCIDAHEDVLRKANVTAEAIQAAVRFASI
IQSAALLLKLPTPNKRSVLIPDKKPARSNPRGLFDGWSEKAISCLSAL

Specific function: Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity [H]

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AhpD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004674
- InterPro:   IPR004675
- InterPro:   IPR003779 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 22568; Mature: 22437

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIDDLKSKIPDFAKDVRLNLSSMASDETLTPQQKYGLFVACGIASRNADVRKALVAEAA
CCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHCCEEEEECCCCCCHHHHHHHHHHHH
GKVDASVIQAAKAAASIMGMNNVYYRFVHLASNKDYRTMPARLRMNVISNPGVDKVDFEL
CCHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCCCHHHHHEEECCCCCCCHHHHHH
WSLAVSAINGCGMCIDAHEDVLRKANVTAEAIQAAVRFASIIQSAALLLKLPTPNKRSVL
HHHHHHHHCCCCEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEE
IPDKKPARSNPRGLFDGWSEKAISCLSAL
CCCCCCCCCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
SIDDLKSKIPDFAKDVRLNLSSMASDETLTPQQKYGLFVACGIASRNADVRKALVAEAA
CHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHCCEEEEECCCCCCHHHHHHHHHHHH
GKVDASVIQAAKAAASIMGMNNVYYRFVHLASNKDYRTMPARLRMNVISNPGVDKVDFEL
CCHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCCCHHHHHEEECCCCCCCHHHHHH
WSLAVSAINGCGMCIDAHEDVLRKANVTAEAIQAAVRFASIIQSAALLLKLPTPNKRSVL
HHHHHHHHCCCCEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEE
IPDKKPARSNPRGLFDGWSEKAISCLSAL
CCCCCCCCCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA