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The map label for this gene is fdhD [H]

Identifier: 225686469

GI number: 225686469

Start: 653903

End: 654712

Strand: Reverse

Name: fdhD [H]

Synonym: BMEA_B0668

Alternate gene names: 225686469

Gene position: 654712-653903 (Counterclockwise)

Preceding gene: 225686471

Following gene: 225686467

Centisome position: 55.23

GC content: 58.89

Gene sequence:

>810_bases
ATGACAAACCAGAAGATCAGCCGGGATGTGCACCACCTTGCGCATCGGATGTCGGGTTTTCAGGAAAGCAGCCGTATCGT
ACCGGAAGAAGCGCCGATTGCCATGAGCTATAATGGCACAACGCAGGCCGTGATGATGGCGACCCCCGGCGATCTGGAAG
ATTTCGCCATCGGGTTCAGCCTGACGGAAAATATCGTTACCCGTATCGAAGAAATAGAGGCACTGGATATCGTTGCTTTT
GAAAGCGGCATCGATATCCAGATGAAGCTTGCAAAACAGCCTGAACAGCGGCTTTCCGCACGGCGCAGGTTCATGGCCGG
GCCGGTCGGCTGCGGCCTTTGCGGGATCGATTCCATCGAACAGGCGCTAAGGCCGCTTCATCCGCTGGAAGAATGCAGCA
CGACCTTTACCACACGCGATATTGCGGCGGCTGTCGCATCGCTGGGTGCGGCGCAGGCCTTGAACGCAAAAACCCATGCG
ACCCATGGTGCGGGGTTTTTTCGGCCGGGTGAGGGGCTTTTTGCCGTGCGCGAGGATATCGGGCGGCACAATGCGCTCGA
CAAGCTGATTGGCGCGGTGGCGCGGGAGGGCTTGCTCGCCGAAGAGGGGATCGTGGCAATCACAAGTCGCGTTTCCGTGG
AAATGGTGCAAAAGGCAGTCATGCTTGGGGTGCCGGTTCTGGCGGCGATTTCGGCCCCGACAGCCCTTGCCATCCGCACG
GCGGAGGCCGCCAATCTCACCCTCGTCGCACTGGTGCGCGACGAGGAATTCGACATTTATACCCATTGCGGGCGTATTAT
AGAGGGTTAG

Upstream 100 bases:

>100_bases
CGTTACTCTTGGGCCTCACGCTTGCTGCACCTTACATAAAACCGAAATTCATGCCACATGAAACTCGATTGACAATCAGG
CCGGGCAGCGAGCGAACACA

Downstream 100 bases:

>100_bases
TCAGACAAGCGCGGCGATGCGGCTGCGCTCGCTCACGATCTGCAAGGCGGCATGGGCCGCTTCCACGCCCTTCACCTTGA
AATGAGCATGGAAGAAGTCG

Product: formate dehydrogenase accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MTNQKISRDVHHLAHRMSGFQESSRIVPEEAPIAMSYNGTTQAVMMATPGDLEDFAIGFSLTENIVTRIEEIEALDIVAF
ESGIDIQMKLAKQPEQRLSARRRFMAGPVGCGLCGIDSIEQALRPLHPLEECSTTFTTRDIAAAVASLGAAQALNAKTHA
THGAGFFRPGEGLFAVREDIGRHNALDKLIGAVAREGLLAEEGIVAITSRVSVEMVQKAVMLGVPVLAAISAPTALAIRT
AEAANLTLVALVRDEEFDIYTHCGRIIEG

Sequences:

>Translated_269_residues
MTNQKISRDVHHLAHRMSGFQESSRIVPEEAPIAMSYNGTTQAVMMATPGDLEDFAIGFSLTENIVTRIEEIEALDIVAF
ESGIDIQMKLAKQPEQRLSARRRFMAGPVGCGLCGIDSIEQALRPLHPLEECSTTFTTRDIAAAVASLGAAQALNAKTHA
THGAGFFRPGEGLFAVREDIGRHNALDKLIGAVAREGLLAEEGIVAITSRVSVEMVQKAVMLGVPVLAAISAPTALAIRT
AEAANLTLVALVRDEEFDIYTHCGRIIEG
>Mature_268_residues
TNQKISRDVHHLAHRMSGFQESSRIVPEEAPIAMSYNGTTQAVMMATPGDLEDFAIGFSLTENIVTRIEEIEALDIVAFE
SGIDIQMKLAKQPEQRLSARRRFMAGPVGCGLCGIDSIEQALRPLHPLEECSTTFTTRDIAAAVASLGAAQALNAKTHAT
HGAGFFRPGEGLFAVREDIGRHNALDKLIGAVAREGLLAEEGIVAITSRVSVEMVQKAVMLGVPVLAAISAPTALAIRTA
EAANLTLVALVRDEEFDIYTHCGRIIEG

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=240, Percent_Identity=41.25, Blast_Score=189, Evalue=2e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 28845; Mature: 28714

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNQKISRDVHHLAHRMSGFQESSRIVPEEAPIAMSYNGTTQAVMMATPGDLEDFAIGFS
CCCHHHHHHHHHHHHHHHCHHHHCCCCCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHH
LTENIVTRIEEIEALDIVAFESGIDIQMKLAKQPEQRLSARRRFMAGPVGCGLCGIDSIE
HHHHHHHHHHHHHHHEEEEECCCCCEEEHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHH
QALRPLHPLEECSTTFTTRDIAAAVASLGAAQALNAKTHATHGAGFFRPGEGLFAVREDI
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
GRHNALDKLIGAVAREGLLAEEGIVAITSRVSVEMVQKAVMLGVPVLAAISAPTALAIRT
CCHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEE
AEAANLTLVALVRDEEFDIYTHCGRIIEG
CCCCCEEEEEEEECCCCHHHHHHHHHCCC
>Mature Secondary Structure 
TNQKISRDVHHLAHRMSGFQESSRIVPEEAPIAMSYNGTTQAVMMATPGDLEDFAIGFS
CCHHHHHHHHHHHHHHHCHHHHCCCCCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHH
LTENIVTRIEEIEALDIVAFESGIDIQMKLAKQPEQRLSARRRFMAGPVGCGLCGIDSIE
HHHHHHHHHHHHHHHEEEEECCCCCEEEHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHH
QALRPLHPLEECSTTFTTRDIAAAVASLGAAQALNAKTHATHGAGFFRPGEGLFAVREDI
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
GRHNALDKLIGAVAREGLLAEEGIVAITSRVSVEMVQKAVMLGVPVLAAISAPTALAIRT
CCHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEE
AEAANLTLVALVRDEEFDIYTHCGRIIEG
CCCCCEEEEEEEECCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA