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The map label for this gene is ugpA [C]

Identifier: 225686465

GI number: 225686465

Start: 650117

End: 651166

Strand: Reverse

Name: ugpA [C]

Synonym: BMEA_B0662

Alternate gene names: 225686465

Gene position: 651166-650117 (Counterclockwise)

Preceding gene: 225686466

Following gene: 225686464

Centisome position: 54.93

GC content: 54.57

Gene sequence:

>1050_bases
ATGCCGATATGCCCGCCTCACCATCCGAGGCGCGTTTCGTGGGACATAGAGCTGTTCCGGTTAAAACGGAATCGCCGGAA
CCGCTCTAACTATTTGTTTTGTCGCATTTTCCAACGCAAAACCGTTTCACACTTTTGGCTTGAAAATGCTCTAGACAAGG
TGGCGCATATGCAGCGTAACAACCGATTACAGGCACTGGTGCCCAAGCTGGTTTTGGGGCCAAGCTTTCTGATCGTACTC
GTCTTCGTTTACGGGTTCATCATCTATACGGGCGTTCTGTCGCTTACAAACAGCCGGATGCTGCCGTCCTATGGCTTTGT
CGGTCTCACCAATTACACAAAGCTCTGGACTCTGCCGCATTGGTGGCGGGCGATCACCAATCTGGCGATTTTTGCATCGC
TCTACATCATCATCTGTTCGGTCATCGGGCTTTTTCTGGCCATCCTGCTCGATCAGAAAATCCGTGGCGAGGGCATCCTG
CGCCCGATCTATCTCTATCCAATGGCGCTTTCCTTCATCGTGACCGGAACCGCATGGAAATGGTTTCTCGATCCCGGCAT
CGGACTGGAACACACCATGCATCTATGGGGGTGGGAAAGCTTTTCCTTCAACTGGATCAAGAGCAACACGATGGCGATCT
ATTGTCTCGTGATTGCGGCGGTCTGGCAGTCGTCCGGCTTCGTCATGGCCATGTTTCTCGCGGGGCTTCGCGGCGTGGAC
AATGAAATCAACAAGGCCGCGCAGATCGACGGCGCTTCCACCGGAACCATTTATCGCCGTATCATCATTCCCCTGATGCG
CCCGGTTTTCCTGTCTGCTTTCGTGGTGCTCGCGCATCTGGCGATCAAGGCCTATGACCTTGTGATCGCGTTGACCGGCG
GCGGGCCGGGGCAGGCGACGGAACTGCCCGCAACCTTCATGTATTCCTATACCTTCACCCGCAACCAGATGGGTATCGGC
GCTTCCTCGGCGATCATCATGCTGGCGATGATCTTCTCGATCATCATTCCCTATCTCTATTCGGAAATTCGCGGAGGGTC
GCGGCCATGA

Upstream 100 bases:

>100_bases
CGGAAACGTCCGGGGGAACCTCCCGGACGTTTTTCCTGCGTGCTCCAGCAGAAGCGCATAGGCGGTTGGCGCAGCTAACC
GGCACTTACGACGGAATTGC

Downstream 100 bases:

>100_bases
GCGTCCAATCGCAAGATAATGCCATCAAGAGCGGAAAGCTCACCCGTGCGCTGATCTATTCCGCGCTCATCTTCTTCGCA
TTCTACTATCTGTTGCCGCT

Product: putative starch degradation products transport system permease amyD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MPICPPHHPRRVSWDIELFRLKRNRRNRSNYLFCRIFQRKTVSHFWLENALDKVAHMQRNNRLQALVPKLVLGPSFLIVL
VFVYGFIIYTGVLSLTNSRMLPSYGFVGLTNYTKLWTLPHWWRAITNLAIFASLYIIICSVIGLFLAILLDQKIRGEGIL
RPIYLYPMALSFIVTGTAWKWFLDPGIGLEHTMHLWGWESFSFNWIKSNTMAIYCLVIAAVWQSSGFVMAMFLAGLRGVD
NEINKAAQIDGASTGTIYRRIIIPLMRPVFLSAFVVLAHLAIKAYDLVIALTGGGPGQATELPATFMYSYTFTRNQMGIG
ASSAIIMLAMIFSIIIPYLYSEIRGGSRP

Sequences:

>Translated_349_residues
MPICPPHHPRRVSWDIELFRLKRNRRNRSNYLFCRIFQRKTVSHFWLENALDKVAHMQRNNRLQALVPKLVLGPSFLIVL
VFVYGFIIYTGVLSLTNSRMLPSYGFVGLTNYTKLWTLPHWWRAITNLAIFASLYIIICSVIGLFLAILLDQKIRGEGIL
RPIYLYPMALSFIVTGTAWKWFLDPGIGLEHTMHLWGWESFSFNWIKSNTMAIYCLVIAAVWQSSGFVMAMFLAGLRGVD
NEINKAAQIDGASTGTIYRRIIIPLMRPVFLSAFVVLAHLAIKAYDLVIALTGGGPGQATELPATFMYSYTFTRNQMGIG
ASSAIIMLAMIFSIIIPYLYSEIRGGSRP
>Mature_348_residues
PICPPHHPRRVSWDIELFRLKRNRRNRSNYLFCRIFQRKTVSHFWLENALDKVAHMQRNNRLQALVPKLVLGPSFLIVLV
FVYGFIIYTGVLSLTNSRMLPSYGFVGLTNYTKLWTLPHWWRAITNLAIFASLYIIICSVIGLFLAILLDQKIRGEGILR
PIYLYPMALSFIVTGTAWKWFLDPGIGLEHTMHLWGWESFSFNWIKSNTMAIYCLVIAAVWQSSGFVMAMFLAGLRGVDN
EINKAAQIDGASTGTIYRRIIIPLMRPVFLSAFVVLAHLAIKAYDLVIALTGGGPGQATELPATFMYSYTFTRNQMGIGA
SSAIIMLAMIFSIIIPYLYSEIRGGSRP

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=289, Percent_Identity=24.9134948096886, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI1787570, Length=236, Percent_Identity=21.6101694915254, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 39628; Mature: 39496

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPICPPHHPRRVSWDIELFRLKRNRRNRSNYLFCRIFQRKTVSHFWLENALDKVAHMQRN
CCCCCCCCCCEEECHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHC
NRLQALVPKLVLGPSFLIVLVFVYGFIIYTGVLSLTNSRMLPSYGFVGLTNYTKLWTLPH
CCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHEECCHH
WWRAITNLAIFASLYIIICSVIGLFLAILLDQKIRGEGILRPIYLYPMALSFIVTGTAWK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEE
WFLDPGIGLEHTMHLWGWESFSFNWIKSNTMAIYCLVIAAVWQSSGFVMAMFLAGLRGVD
EEECCCCCHHHEEEEEECCCCEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
NEINKAAQIDGASTGTIYRRIIIPLMRPVFLSAFVVLAHLAIKAYDLVIALTGGGPGQAT
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCC
ELPATFMYSYTFTRNQMGIGASSAIIMLAMIFSIIIPYLYSEIRGGSRP
CCCHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PICPPHHPRRVSWDIELFRLKRNRRNRSNYLFCRIFQRKTVSHFWLENALDKVAHMQRN
CCCCCCCCCEEECHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHC
NRLQALVPKLVLGPSFLIVLVFVYGFIIYTGVLSLTNSRMLPSYGFVGLTNYTKLWTLPH
CCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHEECCHH
WWRAITNLAIFASLYIIICSVIGLFLAILLDQKIRGEGILRPIYLYPMALSFIVTGTAWK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEE
WFLDPGIGLEHTMHLWGWESFSFNWIKSNTMAIYCLVIAAVWQSSGFVMAMFLAGLRGVD
EEECCCCCHHHEEEEEECCCCEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
NEINKAAQIDGASTGTIYRRIIIPLMRPVFLSAFVVLAHLAIKAYDLVIALTGGGPGQAT
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCC
ELPATFMYSYTFTRNQMGIGASSAIIMLAMIFSIIIPYLYSEIRGGSRP
CCCHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]