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The map label for this gene is ugpA [H]

Identifier: 225686434

GI number: 225686434

Start: 617071

End: 617943

Strand: Direct

Name: ugpA [H]

Synonym: BMEA_B0629

Alternate gene names: 225686434

Gene position: 617071-617943 (Clockwise)

Preceding gene: 225686433

Following gene: 225686435

Centisome position: 52.05

GC content: 57.16

Gene sequence:

>873_bases
GTGCAGAAAGTAACCTTTCCGAATAAGATCCTGCCTTATTTCCTGCTGGCACCGCAGATCGTTTTGACTGTGGTTTTCTT
CTTCTGGCCGGCAAGTCAGGCAATTTATCAGTCCTTCATGCGGGAAGACGCATTCGGGCTCAAATCCACCTTCGTGGAAC
TGGCCAATTTCACCGCCGTCCTTTCGGACCCGAATTATCTCCATTCCGTTCAGGTCACGGTCGTTTTCAACGTCTTGACC
GCCCTGCTCGCCATGGGTGTCGCGCTGCTGCTTGCAACCGCTGCCGACCGCGTCATTCGCGGCCAGACCTTCTACCGTAC
TCTTCTGATCTGGCCCTATGCCGTGGCGCCTGCTGTCGCGGGCATGTTGTGGCTGTTCATGTTCAATCCGGCCATGGGCA
CGTTTGCCTATCTTCTGCGCCGCAACGGCATTGCGTGGGATCCGCTTCTTGACGGCAACCAGGCCATGGGCCTGGTCGTG
GTGGCGGCGGCATGGAAGCAGATTTCCTATAATTTCCTGTTCTTTGTCGCAGGCTTACAGGCAATTCCCAAGTCACTGAT
CGAAGCGGCAGCCATTGACGGCGCGCGCGGCGCGCGGCGCTTCTGGACCATCGTGTTCCCGCTTCTGGCACCGACCTCCT
TCTTCCTTCTGGTGGTCAACACGGTCTATGCCTTCTTCGACACGTTCGGCATCATCCACGCCGTCACCGGCGGCGGCCCG
GCCAAGGCCACGGAAACGCTGGTTTACAATGACGGTTTCGTCAATCTGAACCTCGGCTCATCTTCCGCGCAGTCGGTTAT
TCTGATGGCAATCGTCATTGCCTTGACGGCATTCCAGTTCCGCTTCGTCGAGAAGCGCGTGCATTATTCATGA

Upstream 100 bases:

>100_bases
CAACGCAGCAATCGCCGCAGCTCAATAATCCATCATATCGAGACAATGCCGCCAACCCTTTCCGGGGTTGGCGACATTGC
TGCTCACGAGGAAGCTTCCC

Downstream 100 bases:

>100_bases
GCGAGGCGACCATGATAGAACAACGCCCAGTCTCAAATCTGATCGGCCATCTGATCCTGATCCTCGGGATCATCATTGTC
GCCTTTCCGATCTATTACAC

Product: sn-glycerol-3-phosphate transport system permease UgpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MQKVTFPNKILPYFLLAPQIVLTVVFFFWPASQAIYQSFMREDAFGLKSTFVELANFTAVLSDPNYLHSVQVTVVFNVLT
ALLAMGVALLLATAADRVIRGQTFYRTLLIWPYAVAPAVAGMLWLFMFNPAMGTFAYLLRRNGIAWDPLLDGNQAMGLVV
VAAAWKQISYNFLFFVAGLQAIPKSLIEAAAIDGARGARRFWTIVFPLLAPTSFFLLVVNTVYAFFDTFGIIHAVTGGGP
AKATETLVYNDGFVNLNLGSSSAQSVILMAIVIALTAFQFRFVEKRVHYS

Sequences:

>Translated_290_residues
MQKVTFPNKILPYFLLAPQIVLTVVFFFWPASQAIYQSFMREDAFGLKSTFVELANFTAVLSDPNYLHSVQVTVVFNVLT
ALLAMGVALLLATAADRVIRGQTFYRTLLIWPYAVAPAVAGMLWLFMFNPAMGTFAYLLRRNGIAWDPLLDGNQAMGLVV
VAAAWKQISYNFLFFVAGLQAIPKSLIEAAAIDGARGARRFWTIVFPLLAPTSFFLLVVNTVYAFFDTFGIIHAVTGGGP
AKATETLVYNDGFVNLNLGSSSAQSVILMAIVIALTAFQFRFVEKRVHYS
>Mature_290_residues
MQKVTFPNKILPYFLLAPQIVLTVVFFFWPASQAIYQSFMREDAFGLKSTFVELANFTAVLSDPNYLHSVQVTVVFNVLT
ALLAMGVALLLATAADRVIRGQTFYRTLLIWPYAVAPAVAGMLWLFMFNPAMGTFAYLLRRNGIAWDPLLDGNQAMGLVV
VAAAWKQISYNFLFFVAGLQAIPKSLIEAAAIDGARGARRFWTIVFPLLAPTSFFLLVVNTVYAFFDTFGIIHAVTGGGP
AKATETLVYNDGFVNLNLGSSSAQSVILMAIVIALTAFQFRFVEKRVHYS

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=291, Percent_Identity=52.233676975945, Blast_Score=283, Evalue=7e-78,
Organism=Escherichia coli, GI1787570, Length=268, Percent_Identity=30.2238805970149, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1790465, Length=209, Percent_Identity=31.5789473684211, Blast_Score=78, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32011; Mature: 32011

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCHHEEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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CCHHEEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA