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The map label for this gene is yqgF [C]

Identifier: 225686383

GI number: 225686383

Start: 562531

End: 563019

Strand: Direct

Name: yqgF [C]

Synonym: BMEA_B0572

Alternate gene names: 225686383

Gene position: 562531-563019 (Clockwise)

Preceding gene: 225686377

Following gene: 225686385

Centisome position: 47.45

GC content: 61.35

Gene sequence:

>489_bases
ATGGCAACCGCTGAAATAGAAGAAATTCCGGCACTGCTGAAGCCCGGACAGACGGTTGCCGGGCTTGATCTTGGAACAAA
GACCATCGGCCTTGCCGTTTCCGATCTTGGCCTTTCCTTCGCCCATCCGCGCCCGGTCATCAAGCGAGTCAAGTTTACCA
TCGACGCTCAGGTGCTATTGAAGGCGCTGGAAACCGACAAGGTTGGCGTCATCGTGATCGGCCTGCCCATGAACATGGAC
GGCACGGCCGGGCCGCGCGTTCAGGCCACGCGCGCCTTCGTGCGCACCATGCAACCGCTGACCGACCTGCCCTTCGTATT
CTGGGATGAGCGGCTTTCAACAGTTGCAGCAGAGCGGGCGCTGATCGGCATGGACGTCTCGCGCGGCAAGCGGGCCGACC
GTATCGATTCCGCTGCTGCCGCCTTCATCCTGCAAGGCGCGCTCGACCGGCTGCATATGATGCGCAGGAACGATTACGAC
GCCGGATAG

Upstream 100 bases:

>100_bases
TGTATATTTCCTTCGGTCTCGATTTCTGGTGTGTGAACAGATATGACGCCGATAAAGTTGAAAGCAATATGCAGGCAGTT
GAAAAATCTGATGAGGACCA

Downstream 100 bases:

>100_bases
AGCTGGTCGATGATACGCATCGCATTGTGGCGCGCATCCAGCATCCCGTAGGTGGTGCGCCACAGGCCGCCGAGGCGGGT
TTCGATAAAGGCATCAGCAA

Product: Holliday junction resolvase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MATAEIEEIPALLKPGQTVAGLDLGTKTIGLAVSDLGLSFAHPRPVIKRVKFTIDAQVLLKALETDKVGVIVIGLPMNMD
GTAGPRVQATRAFVRTMQPLTDLPFVFWDERLSTVAAERALIGMDVSRGKRADRIDSAAAAFILQGALDRLHMMRRNDYD
AG

Sequences:

>Translated_162_residues
MATAEIEEIPALLKPGQTVAGLDLGTKTIGLAVSDLGLSFAHPRPVIKRVKFTIDAQVLLKALETDKVGVIVIGLPMNMD
GTAGPRVQATRAFVRTMQPLTDLPFVFWDERLSTVAAERALIGMDVSRGKRADRIDSAAAAFILQGALDRLHMMRRNDYD
AG
>Mature_161_residues
ATAEIEEIPALLKPGQTVAGLDLGTKTIGLAVSDLGLSFAHPRPVIKRVKFTIDAQVLLKALETDKVGVIVIGLPMNMDG
TAGPRVQATRAFVRTMQPLTDLPFVFWDERLSTVAAERALIGMDVSRGKRADRIDSAAAAFILQGALDRLHMMRRNDYDA
G

Specific function: Could be a nuclease that resolves Holliday junction intermediates in genetic recombination [H]

COG id: COG0816

COG function: function code L; Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yqgF HJR family [H]

Homologues:

Organism=Escherichia coli, GI1789318, Length=133, Percent_Identity=33.8345864661654, Blast_Score=74, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR012337 [H]

Pfam domain/function: PF03652 UPF0081 [H]

EC number: NA

Molecular weight: Translated: 17527; Mature: 17396

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATAEIEEIPALLKPGQTVAGLDLGTKTIGLAVSDLGLSFAHPRPVIKRVKFTIDAQVLL
CCCCCHHHHHHHHCCCCEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
KALETDKVGVIVIGLPMNMDGTAGPRVQATRAFVRTMQPLTDLPFVFWDERLSTVAAERA
HHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LIGMDVSRGKRADRIDSAAAAFILQGALDRLHMMRRNDYDAG
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ATAEIEEIPALLKPGQTVAGLDLGTKTIGLAVSDLGLSFAHPRPVIKRVKFTIDAQVLL
CCCCHHHHHHHHCCCCEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
KALETDKVGVIVIGLPMNMDGTAGPRVQATRAFVRTMQPLTDLPFVFWDERLSTVAAERA
HHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LIGMDVSRGKRADRIDSAAAAFILQGALDRLHMMRRNDYDAG
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA