Click here to switch to the map view.

The map label for this gene is med [H]

Identifier: 225686354

GI number: 225686354

Start: 524802

End: 525869

Strand: Reverse

Name: med [H]

Synonym: BMEA_B0540

Alternate gene names: 225686354

Gene position: 525869-524802 (Counterclockwise)

Preceding gene: 225686355

Following gene: 225686346

Centisome position: 44.36

GC content: 55.62

Gene sequence:

>1068_bases
ATGAAAAAGACCCTTATGGTAATTGCTACTGTCGCGGGCTTTATGCTCGGCGGGGCGGCACATGCAGAAGAAAAACTGAA
GGTGGGCTTCATCTATATCGGCCCTCCCGGCGATTTCGGCTGGACGTACCAGCATGATCAGGCGCGCAAGGAGCTGGTCG
AGGCGCTCGGCGACAAGGTTGAAACCACCTTTCTTGAAAACGTAGCCGAAGGTGCGGATGCCGAGCGCTCCATCGAACGT
CTTGCCCGCGCAGGCAACAAGCTGATCTTCACAACCTCCTTCGGTTACATGGACCCGACCGTGAAGGTCACCAAGAAGTT
CCCGGACGTGAAGTTTGAACATGCAACCGGCTACAAGACCGCAGACAACATGTCCGCCTATAATGCGCGCTTCTATGAAG
GCCGTTATGTGCAGGGCGTGATTGCCGCAAAGATGTCGAAGAAGGGCTTTGCCGGCTATATCGGCTCCGTGCCGATGCCG
GAAGTCGTGCAGGGCATCAACTCCTTCATGCTGGGCGCACAGTCCGTCAATCCTGATTTCAGGGTCAAGGTAATCTGGGT
CAATTCCTGGTTCGATCCGGGCAAGGAAGCCGATGCCGCCAAGGCGCTGATTGATCAGGGCGTGGATATCATCACCCAGC
ACACGGATTCCACCGCCGCCATTCAGGTGGCGCACGACCGCGGCATCAAGGCGTTCGGCCAGGCTTCGGACATGATCAAG
TTTGCGCCTGACACGCAGCTTACCGCTGTTGTTGACGAATGGGGTCCGTACTATATCGACCGCGCCAAGGCTGTTCTTGA
CGGTACGTGGAAAAGCCAGAACATCTGGTGGGGTATGAAGGAAGGCCTCGTGAAGATGGCGCCTTTCACCAATATGCCAG
ATGATGTGAAGAAGCTGGCGGAAGAAACCGAAGCCAGGATCAAGTCTGGTGAACTCAATCCCTTCACCGGCCCGATCAAG
AAGCAAGACGGTTCGGAATGGCTGAAAGCAGGCGAAAAGGCTGATGACCAGACCCTGCTTGGCATGAATTTCTACGTTGC
TGGCGTGGATGATAAGCTGCCGCAATAA

Upstream 100 bases:

>100_bases
TTTGTTCCGGATCGATAGAACAAGCGGCTTTGGAGTAAACGCAAACCATCCCAAGGGTTTTCGTTTTGGTTAGTGGGTGC
AAACAAGGAGCACAGGGATC

Downstream 100 bases:

>100_bases
GCTTGAAAGCATAAACAAGGAAAAGGGCGCCCAAAGCGCCCTTTTTATTATCCTGCAATGTGATGGGACTGCTTATGCAG
CGTGTTTCGATCTTCATGAA

Product: basic membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MKKTLMVIATVAGFMLGGAAHAEEKLKVGFIYIGPPGDFGWTYQHDQARKELVEALGDKVETTFLENVAEGADAERSIER
LARAGNKLIFTTSFGYMDPTVKVTKKFPDVKFEHATGYKTADNMSAYNARFYEGRYVQGVIAAKMSKKGFAGYIGSVPMP
EVVQGINSFMLGAQSVNPDFRVKVIWVNSWFDPGKEADAAKALIDQGVDIITQHTDSTAAIQVAHDRGIKAFGQASDMIK
FAPDTQLTAVVDEWGPYYIDRAKAVLDGTWKSQNIWWGMKEGLVKMAPFTNMPDDVKKLAEETEARIKSGELNPFTGPIK
KQDGSEWLKAGEKADDQTLLGMNFYVAGVDDKLPQ

Sequences:

>Translated_355_residues
MKKTLMVIATVAGFMLGGAAHAEEKLKVGFIYIGPPGDFGWTYQHDQARKELVEALGDKVETTFLENVAEGADAERSIER
LARAGNKLIFTTSFGYMDPTVKVTKKFPDVKFEHATGYKTADNMSAYNARFYEGRYVQGVIAAKMSKKGFAGYIGSVPMP
EVVQGINSFMLGAQSVNPDFRVKVIWVNSWFDPGKEADAAKALIDQGVDIITQHTDSTAAIQVAHDRGIKAFGQASDMIK
FAPDTQLTAVVDEWGPYYIDRAKAVLDGTWKSQNIWWGMKEGLVKMAPFTNMPDDVKKLAEETEARIKSGELNPFTGPIK
KQDGSEWLKAGEKADDQTLLGMNFYVAGVDDKLPQ
>Mature_355_residues
MKKTLMVIATVAGFMLGGAAHAEEKLKVGFIYIGPPGDFGWTYQHDQARKELVEALGDKVETTFLENVAEGADAERSIER
LARAGNKLIFTTSFGYMDPTVKVTKKFPDVKFEHATGYKTADNMSAYNARFYEGRYVQGVIAAKMSKKGFAGYIGSVPMP
EVVQGINSFMLGAQSVNPDFRVKVIWVNSWFDPGKEADAAKALIDQGVDIITQHTDSTAAIQVAHDRGIKAFGQASDMIK
FAPDTQLTAVVDEWGPYYIDRAKAVLDGTWKSQNIWWGMKEGLVKMAPFTNMPDDVKKLAEETEARIKSGELNPFTGPIK
KQDGSEWLKAGEKADDQTLLGMNFYVAGVDDKLPQ

Specific function: Positive activator of the comK gene [H]

COG id: COG1744

COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BMP lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003760 [H]

Pfam domain/function: PF02608 Bmp [H]

EC number: NA

Molecular weight: Translated: 39103; Mature: 39103

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLMVIATVAGFMLGGAAHAEEKLKVGFIYIGPPGDFGWTYQHDQARKELVEALGDKV
CCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCHH
ETTFLENVAEGADAERSIERLARAGNKLIFTTSFGYMDPTVKVTKKFPDVKFEHATGYKT
HHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEECCCCCEEECCCCCCC
ADNMSAYNARFYEGRYVQGVIAAKMSKKGFAGYIGSVPMPEVVQGINSFMLGAQSVNPDF
CCCCCHHCCEEECCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCE
RVKVIWVNSWFDPGKEADAAKALIDQGVDIITQHTDSTAAIQVAHDRGIKAFGQASDMIK
EEEEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEECCCCCHHHCCCCCCEE
FAPDTQLTAVVDEWGPYYIDRAKAVLDGTWKSQNIWWGMKEGLVKMAPFTNMPDDVKKLA
ECCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEHHHCCEEECCCCCCCHHHHHHH
EETEARIKSGELNPFTGPIKKQDGSEWLKAGEKADDQTLLGMNFYVAGVDDKLPQ
HHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEEEEEEECCCCCCC
>Mature Secondary Structure
MKKTLMVIATVAGFMLGGAAHAEEKLKVGFIYIGPPGDFGWTYQHDQARKELVEALGDKV
CCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCHH
ETTFLENVAEGADAERSIERLARAGNKLIFTTSFGYMDPTVKVTKKFPDVKFEHATGYKT
HHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEECCCCCEEECCCCCCC
ADNMSAYNARFYEGRYVQGVIAAKMSKKGFAGYIGSVPMPEVVQGINSFMLGAQSVNPDF
CCCCCHHCCEEECCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCE
RVKVIWVNSWFDPGKEADAAKALIDQGVDIITQHTDSTAAIQVAHDRGIKAFGQASDMIK
EEEEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEECCCCCHHHCCCCCCEE
FAPDTQLTAVVDEWGPYYIDRAKAVLDGTWKSQNIWWGMKEGLVKMAPFTNMPDDVKKLA
ECCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEHHHCCEEECCCCCCCHHHHHHH
EETEARIKSGELNPFTGPIKKQDGSEWLKAGEKADDQTLLGMNFYVAGVDDKLPQ
HHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9335269; 9384377 [H]