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The map label for this gene is lpsB [H]

Identifier: 225686231

GI number: 225686231

Start: 388696

End: 389892

Strand: Direct

Name: lpsB [H]

Synonym: BMEA_B0400

Alternate gene names: 225686231

Gene position: 388696-389892 (Clockwise)

Preceding gene: 225686230

Following gene: 225686239

Centisome position: 32.79

GC content: 58.48

Gene sequence:

>1197_bases
ATGAAAATCATTCATGTCATAGGCTCTTATGACCCTGCTAAGGGTGGCCCGCAGGCGGTGGTGGTGCGGCTGGCCGCAGC
GCAGGCTTCGCTCGGTCACAGGGTAACAATCGTAAGCTATAGCGACGACGCGGTCAGCCGCCGCGCGGCCGAGGCAACGG
CCATGATTCCCGATTTCGACAAGGTGCAGACCCTGCTGCTTCCCATGCCGGATATTTATGAGACATTCACCGGCGGGCAC
ACCGCAAATGCGGTGACGGCGCTGATCCGCGGCGCGGATTTCGTGCATCTGCATGGCATATGGGAAACCAATCTCCTGCG
TGCTTCCATGCTCTGCCGCCGCTTTCACATACCCTATTGCGTGTGTTGCTGCGGAATGCTCGATATCTGGAGTATGCAGC
AAAAATCATGGAAGAAGCGGCTTGCCTTGAAGCTTGGTTTTCGTCGAATGCTGGATGGAGCAGCTTTCATCCACGCGCTC
AACCGTGATGAAATCGAGCTGATGCGGCCCCTTGGCCTGAAGGCGCCTTCACTTGTTATCCCGAACGGCGTTTTCCTGAA
TGAAGTCGAGGTGGGCGACATGGATGTTCCGGGCCTGCCGGCACGGCGCTTTATCCTGTTTCTGTCACGGCTTCATTACA
AGAAGAGGCTCGATATTCTGGCCGATGCCTATTGCCGGATTGCACCGCACTTTCGCGATGTCGATCTGGTGGTTGCCGGA
CCGGATGGCGGAGCAGAAGACGCGTTTCGCCGGAAAATTGCCGAATATGGATTGCAGCACCGCGTGCATATGCCCGGTGG
GCTTTACGGGCTGGCCAAGATCGCAGCCCTGAAACGGGCTGCCTGTTTCTGTCTGCCAAGCCGTCAGGAAGGGTTCAGTG
TCGCGATCACCGAGGCGCTTGCCTGCGGTGCGCCGGTGGTCATCACCGATGCCTGTCATTTTCCCGAAGTGGGCGAGGCT
GGGGCAGGCGTGGTCTGCGCGCTGAATGCGGAGATGGTGGGCGATGCGCTTGCGGGCGTTCTGGAAGATCTGGATAAGGC
AGCACAGATGGGGGCTTCAGGCGCCAAGCTTGTGCGCGAAAATTATACCTGGCCGCGCATCGCACGGCAAACCATCGAGG
CTTATCAGATGTATCGAGCGCGCAAGGCGGAGCCGGTTAAAGGCGAAAATCCATTCAGGACAATTCCCGCCGCCTGA

Upstream 100 bases:

>100_bases
TGAGCGAAAGCGCGCGGGAGAGGGGTGCTGATTTCACCGTATCGCGCTATGGCGAACGACTGGTCGCAGCGCTGGCCCGT
CACGACAGGAGGCAACGCGC

Downstream 100 bases:

>100_bases
TAATGCTTGCCAAATAAGAAGGGCCGCCCGACTGGAGTGGAGCGGCCCTTCTTCATTCCGTGTTCGTGGATTAGAACTTG
TAGTTCAGACCGACGCGAAC

Product: glycosyl transferase group 1 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MKIIHVIGSYDPAKGGPQAVVVRLAAAQASLGHRVTIVSYSDDAVSRRAAEATAMIPDFDKVQTLLLPMPDIYETFTGGH
TANAVTALIRGADFVHLHGIWETNLLRASMLCRRFHIPYCVCCCGMLDIWSMQQKSWKKRLALKLGFRRMLDGAAFIHAL
NRDEIELMRPLGLKAPSLVIPNGVFLNEVEVGDMDVPGLPARRFILFLSRLHYKKRLDILADAYCRIAPHFRDVDLVVAG
PDGGAEDAFRRKIAEYGLQHRVHMPGGLYGLAKIAALKRAACFCLPSRQEGFSVAITEALACGAPVVITDACHFPEVGEA
GAGVVCALNAEMVGDALAGVLEDLDKAAQMGASGAKLVRENYTWPRIARQTIEAYQMYRARKAEPVKGENPFRTIPAA

Sequences:

>Translated_398_residues
MKIIHVIGSYDPAKGGPQAVVVRLAAAQASLGHRVTIVSYSDDAVSRRAAEATAMIPDFDKVQTLLLPMPDIYETFTGGH
TANAVTALIRGADFVHLHGIWETNLLRASMLCRRFHIPYCVCCCGMLDIWSMQQKSWKKRLALKLGFRRMLDGAAFIHAL
NRDEIELMRPLGLKAPSLVIPNGVFLNEVEVGDMDVPGLPARRFILFLSRLHYKKRLDILADAYCRIAPHFRDVDLVVAG
PDGGAEDAFRRKIAEYGLQHRVHMPGGLYGLAKIAALKRAACFCLPSRQEGFSVAITEALACGAPVVITDACHFPEVGEA
GAGVVCALNAEMVGDALAGVLEDLDKAAQMGASGAKLVRENYTWPRIARQTIEAYQMYRARKAEPVKGENPFRTIPAA
>Mature_398_residues
MKIIHVIGSYDPAKGGPQAVVVRLAAAQASLGHRVTIVSYSDDAVSRRAAEATAMIPDFDKVQTLLLPMPDIYETFTGGH
TANAVTALIRGADFVHLHGIWETNLLRASMLCRRFHIPYCVCCCGMLDIWSMQQKSWKKRLALKLGFRRMLDGAAFIHAL
NRDEIELMRPLGLKAPSLVIPNGVFLNEVEVGDMDVPGLPARRFILFLSRLHYKKRLDILADAYCRIAPHFRDVDLVVAG
PDGGAEDAFRRKIAEYGLQHRVHMPGGLYGLAKIAALKRAACFCLPSRQEGFSVAITEALACGAPVVITDACHFPEVGEA
GAGVVCALNAEMVGDALAGVLEDLDKAAQMGASGAKLVRENYTWPRIARQTIEAYQMYRARKAEPVKGENPFRTIPAA

Specific function: Acts at transfer of mannose group to a 3-deoxy-D-mono octulonic acid (KDO) via an alpha-1,5 linkage [H]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 43506; Mature: 43506

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIHVIGSYDPAKGGPQAVVVRLAAAQASLGHRVTIVSYSDDAVSRRAAEATAMIPDFD
CEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCCHH
KVQTLLLPMPDIYETFTGGHTANAVTALIRGADFVHLHGIWETNLLRASMLCRRFHIPYC
HHHHHHCCCCHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCHHH
VCCCGMLDIWSMQQKSWKKRLALKLGFRRMLDGAAFIHALNRDEIELMRPLGLKAPSLVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEC
PNGVFLNEVEVGDMDVPGLPARRFILFLSRLHYKKRLDILADAYCRIAPHFRDVDLVVAG
CCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC
PDGGAEDAFRRKIAEYGLQHRVHMPGGLYGLAKIAALKRAACFCLPSRQEGFSVAITEAL
CCCCHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHEECCCCCCCCEEEHHHHH
ACGAPVVITDACHFPEVGEAGAGVVCALNAEMVGDALAGVLEDLDKAAQMGASGAKLVRE
HCCCCEEEECCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHC
NYTWPRIARQTIEAYQMYRARKAEPVKGENPFRTIPAA
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKIIHVIGSYDPAKGGPQAVVVRLAAAQASLGHRVTIVSYSDDAVSRRAAEATAMIPDFD
CEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCCHH
KVQTLLLPMPDIYETFTGGHTANAVTALIRGADFVHLHGIWETNLLRASMLCRRFHIPYC
HHHHHHCCCCHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCHHH
VCCCGMLDIWSMQQKSWKKRLALKLGFRRMLDGAAFIHALNRDEIELMRPLGLKAPSLVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEC
PNGVFLNEVEVGDMDVPGLPARRFILFLSRLHYKKRLDILADAYCRIAPHFRDVDLVVAG
CCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC
PDGGAEDAFRRKIAEYGLQHRVHMPGGLYGLAKIAALKRAACFCLPSRQEGFSVAITEAL
CCCCHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHEECCCCCCCCEEEHHHHH
ACGAPVVITDACHFPEVGEAGAGVVCALNAEMVGDALAGVLEDLDKAAQMGASGAKLVRE
HCCCCEEEECCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHC
NYTWPRIARQTIEAYQMYRARKAEPVKGENPFRTIPAA
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11157937; 11481430 [H]