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The map label for this gene is agmR [H]

Identifier: 225686225

GI number: 225686225

Start: 379541

End: 380308

Strand: Direct

Name: agmR [H]

Synonym: BMEA_B0393

Alternate gene names: 225686225

Gene position: 379541-380308 (Clockwise)

Preceding gene: 225686223

Following gene: 225686226

Centisome position: 32.01

GC content: 54.04

Gene sequence:

>768_bases
ATGAATATTTCTCCACAGTTCAAAGATGAGAGTAAGAATCCCCATAATATCTATGCCAGCAAGATATCGACAGAAAAAGA
CCAGCTTTATGAGGTTGAGCGGCCTCTTCTTGTTATCATCGACAGCCGGGCGCTGGATCGTGAATGTCTGGCGCATGGCC
TGACAAACAACAGCGTGGATATGACCATTGCAACCTTCAGTTCCTACGAACAGTGGCAGCATCAGCGCCGCAATCGCAAG
GCTGCGGTCGTGCTCTTCAACGTGGGCGGGCAGAAGGTTTCAGACCCGGCGGTCGGCAATTATCTGAAAAACCTCGTGGC
TGAATGTGCGCCGGCACCTGTCATCCTGCTTGCCGATAAGGAGGAAATTTCGCAGGTCGTAAGGGCGCTGGAGCATGGGG
TGAAGGGCTATATTCCCACTTCGGTCAATGTCCATGTCTGTGTCGAGGCGCTTCGGCTTGCCATGGCTGGCGGTACATTT
GTTCCGGCAAGCAGCGTTCTTGCGCTTCGCCATGCAACGGAAGCGGGCGGGCAGAGGATTCAACCTCTTGGCGGCATGTT
CACGCAGCGCCAGGCCGAAGTGGTCAATGCCCTGCGGCGCGGCAAGGCCAACAAGATCATCGCTTATGAGCTGAAGCTTC
GGGAGAGCACGGTAAAGGTTCATATCCGAAATATCATGAAGAAGCTCAAGGCATCCAACCGCACGGAAGTGGCCTGCATC
ATCAACGAGCTTTTTCCTTCGGAAACCGCGTTTTCCGACCTGCAATAG

Upstream 100 bases:

>100_bases
AACGAAATAAAAATAAACTTTAAAAGAAGCGTGGTCGTACGGCCCATGTTGTTTTTAAAAACAATGGGACTGCGGGGCGA
ACGATTCAGAGGGCGATACA

Downstream 100 bases:

>100_bases
CTTCATCAGGCCCATCCTCCCGCAAGGAGAATTTTTGTGATTATCTCCGACGTTTCATCAGCAAACGGGCGGCAGCCGGT
TGCCGACCTGCTTGAGACCA

Product: two component transcriptional regulator, LuxR family protein

Products: NA

Alternate protein names: Protein AgmR [H]

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MNISPQFKDESKNPHNIYASKISTEKDQLYEVERPLLVIIDSRALDRECLAHGLTNNSVDMTIATFSSYEQWQHQRRNRK
AAVVLFNVGGQKVSDPAVGNYLKNLVAECAPAPVILLADKEEISQVVRALEHGVKGYIPTSVNVHVCVEALRLAMAGGTF
VPASSVLALRHATEAGGQRIQPLGGMFTQRQAEVVNALRRGKANKIIAYELKLRESTVKVHIRNIMKKLKASNRTEVACI
INELFPSETAFSDLQ

Sequences:

>Translated_255_residues
MNISPQFKDESKNPHNIYASKISTEKDQLYEVERPLLVIIDSRALDRECLAHGLTNNSVDMTIATFSSYEQWQHQRRNRK
AAVVLFNVGGQKVSDPAVGNYLKNLVAECAPAPVILLADKEEISQVVRALEHGVKGYIPTSVNVHVCVEALRLAMAGGTF
VPASSVLALRHATEAGGQRIQPLGGMFTQRQAEVVNALRRGKANKIIAYELKLRESTVKVHIRNIMKKLKASNRTEVACI
INELFPSETAFSDLQ
>Mature_255_residues
MNISPQFKDESKNPHNIYASKISTEKDQLYEVERPLLVIIDSRALDRECLAHGLTNNSVDMTIATFSSYEQWQHQRRNRK
AAVVLFNVGGQKVSDPAVGNYLKNLVAECAPAPVILLADKEEISQVVRALEHGVKGYIPTSVNVHVCVEALRLAMAGGTF
VPASSVLALRHATEAGGQRIQPLGGMFTQRQAEVVNALRRGKANKIIAYELKLRESTVKVHIRNIMKKLKASNRTEVACI
INELFPSETAFSDLQ

Specific function: Positive activator for glycerol metabolism [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=159, Percent_Identity=31.4465408805031, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 28232; Mature: 28232

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNISPQFKDESKNPHNIYASKISTEKDQLYEVERPLLVIIDSRALDRECLAHGLTNNSVD
CCCCCCCCCCCCCCCCEEHHHCCCCHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCCCEE
MTIATFSSYEQWQHQRRNRKAAVVLFNVGGQKVSDPAVGNYLKNLVAECAPAPVILLADK
EEEEEHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECH
EEISQVVRALEHGVKGYIPTSVNVHVCVEALRLAMAGGTFVPASSVLALRHATEAGGQRI
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEE
QPLGGMFTQRQAEVVNALRRGKANKIIAYELKLRESTVKVHIRNIMKKLKASNRTEVACI
CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHH
INELFPSETAFSDLQ
HHHHCCCCCHHCCCC
>Mature Secondary Structure
MNISPQFKDESKNPHNIYASKISTEKDQLYEVERPLLVIIDSRALDRECLAHGLTNNSVD
CCCCCCCCCCCCCCCCEEHHHCCCCHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCCCEE
MTIATFSSYEQWQHQRRNRKAAVVLFNVGGQKVSDPAVGNYLKNLVAECAPAPVILLADK
EEEEEHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECH
EEISQVVRALEHGVKGYIPTSVNVHVCVEALRLAMAGGTFVPASSVLALRHATEAGGQRI
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEE
QPLGGMFTQRQAEVVNALRRGKANKIIAYELKLRESTVKVHIRNIMKKLKASNRTEVACI
CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHH
INELFPSETAFSDLQ
HHHHCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1938886; 10984043 [H]