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The map label for this gene is yaeJ [C]

Identifier: 225853519

GI number: 225853519

Start: 2028399

End: 2028836

Strand: Reverse

Name: yaeJ [C]

Synonym: BMEA_A2150

Alternate gene names: 225853519

Gene position: 2028836-2028399 (Counterclockwise)

Preceding gene: 225853533

Following gene: 225853511

Centisome position: 95.44

GC content: 59.36

Gene sequence:

>438_bases
ATGCAAGAGGATCGCAACATCATCCGCATAACCAGGCGCCTGTCGATCCACGAGGACGATCTGGAGGAAGCGTTTATCCG
CGCATCCGGCCCCGGCGGGCAGAATGTCAACAAGGTTTCGACCGCTGTGCAATTGCGCTTTCATGCCGCGCGATCCGGTC
TGCCGGAAGATATTCTGTCACGGCTTTTCAAGCTGGCCGGACAGAAAGGCACAAAGGACGGCGATATCCTGATTGAAGCC
AATCGCTTCCGCACGCAGGAGCGCAATCGCGAGGACGCCCGCGAACGCCTTCTTGCGCTGATCGCCAAGGCAGCCGAACC
GCCGCCCCCGCCACGCAAGAAGACCAAACCATCCAGAGGTGCGGTCGAGCGCCGCCTGAAGGCAAAATCCGGCCGCTCCG
AGATCAAAAAAGGACGCGGCAAGGTTTCTTTTGATTAG

Upstream 100 bases:

>100_bases
TATTGAGGAGGGGGGAAGCCCGGCCATCGCGCCGGGCTTCTTTTTTTGGCTGTTATCGCAAGAATTTCGCAGGGCGCCAA
ATCAGTGTATGGGTTCTCTC

Downstream 100 bases:

>100_bases
GCTGTAATGACCCGGAAGCGGGAACCGGTTTTGCATCCGGTCATGGGGAAAGAATGCTCGCGTCAGATTTTCCTGAGAGC
CACTTCCTCAATCAGATGAT

Product: peptidyl-tRNA hydrolase domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MQEDRNIIRITRRLSIHEDDLEEAFIRASGPGGQNVNKVSTAVQLRFHAARSGLPEDILSRLFKLAGQKGTKDGDILIEA
NRFRTQERNREDARERLLALIAKAAEPPPPPRKKTKPSRGAVERRLKAKSGRSEIKKGRGKVSFD

Sequences:

>Translated_145_residues
MQEDRNIIRITRRLSIHEDDLEEAFIRASGPGGQNVNKVSTAVQLRFHAARSGLPEDILSRLFKLAGQKGTKDGDILIEA
NRFRTQERNREDARERLLALIAKAAEPPPPPRKKTKPSRGAVERRLKAKSGRSEIKKGRGKVSFD
>Mature_145_residues
MQEDRNIIRITRRLSIHEDDLEEAFIRASGPGGQNVNKVSTAVQLRFHAARSGLPEDILSRLFKLAGQKGTKDGDILIEA
NRFRTQERNREDARERLLALIAKAAEPPPPPRKKTKPSRGAVERRLKAKSGRSEIKKGRGKVSFD

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=136, Percent_Identity=44.1176470588235, Blast_Score=103, Evalue=5e-24,
Organism=Drosophila melanogaster, GI19921098, Length=131, Percent_Identity=38.1679389312977, Blast_Score=79, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 16305; Mature: 16305

Theoretical pI: Translated: 11.42; Mature: 11.42

Prosite motif: PS00745 RF_PROK_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEDRNIIRITRRLSIHEDDLEEAFIRASGPGGQNVNKVSTAVQLRFHAARSGLPEDILS
CCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHH
RLFKLAGQKGTKDGDILIEANRFRTQERNREDARERLLALIAKAAEPPPPPRKKTKPSRG
HHHHHHCCCCCCCCCEEEECHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
AVERRLKAKSGRSEIKKGRGKVSFD
HHHHHHHHHCCHHHHHHCCCCCCCC
>Mature Secondary Structure
MQEDRNIIRITRRLSIHEDDLEEAFIRASGPGGQNVNKVSTAVQLRFHAARSGLPEDILS
CCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHH
RLFKLAGQKGTKDGDILIEANRFRTQERNREDARERLLALIAKAAEPPPPPRKKTKPSRG
HHHHHHCCCCCCCCCEEEECHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
AVERRLKAKSGRSEIKKGRGKVSFD
HHHHHHHHHCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1624453 [H]