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The map label for this gene is lrrA [H]

Identifier: 225853388

GI number: 225853388

Start: 1900359

End: 1901315

Strand: Reverse

Name: lrrA [H]

Synonym: BMEA_A2008

Alternate gene names: 225853388

Gene position: 1901315-1900359 (Counterclockwise)

Preceding gene: 225853389

Following gene: 225853382

Centisome position: 89.44

GC content: 59.35

Gene sequence:

>957_bases
GTGAGCGAACAAAGCCAGATGGTGGTCAGCCGGTTGGGCTTCGACCTGCAATCCCTGGAAATATTCATTGCAGTCTGCAA
AACCGGCAGTATGACGGCTGCCGCCGCCTATAGCGACCTGACCCAGTCAGCCGTTTCGCGGCAGATAATCAATCTGGAAA
AGCGCCTTGGCGTCGGCCTGATCGAACGCGGCTCGCGCCCATTGAAACCGACGCTTGCCGGACAGAAGCTGATAAAGGCG
GCTGAACATCTGATTTCGGAAGCTGCGGCCATACCAACGCAATTGCAGGGCGCGGATACGCGCATGATCCCGCAATTCCG
GCTGGGGCTGATCGATTCCCTGTCGGACCCGCTCGTGCCGATGCTGATAAAGGCGCTGCGTGATCGTGTCGGCTCGGTTT
CGGTGGCGACAGGCTTCATGGCGCCCCTGCGCCAACGCCTGCTCAAGCGCGAGCTCGATGCGGTGATTTCGGCTGATCCT
TTCGATGATGTCGACGGTTTTGAGCGATTCGAGCTGTTTCAGGAGCAATTCGTGGTGCTGGCCTCGCGCGGTGAACAGCC
GTTTGGCGACGAGGCCGAGTTTCGCAATTTTGCCGCTCGTTTTCCGATGATCCGGTCCGGCACATCTTCCGGCATTGCGC
AGCGGGTCGAGCAGCATTTCCGCCGCATGAAACTCGATGTGCCGCCTGCATTTTCGTGTGAAACGGTTGAATCTATCGTC
AGTCTTGTGGCTTCCGGGGTGGGGTGGTCCGTCCTGACACCTGTATGCGTTCGCAAATGTATCGCACTTGCGCCCGCCAT
TCAGGTTCTGCAATTTCCGGGCGCGGGCTTCTCGCGACGCATCTATCTCGTCGTCCGCCGGGGCGAGCTTGACCCCTTCG
CCAGGCAATTGTCGGTCATATGCCGGCGCATCATCCAGAAAAGCTATATCCCGCAGCTTGCGGCCCTCGCTCCCTGA

Upstream 100 bases:

>100_bases
CGATTTAGTATCTATTTCCGCCGCAATCGGGCGATTGACGATTACCGATATTTCTGATTAGTATGATTGAAATTCATAAT
TATAGCATGGGCGGCGGCTG

Downstream 100 bases:

>100_bases
ATGGTCGATGCCATTGCGCTTAATTGATTTTCGACCATAGCCCGCCTGCCATCCTTCTTCCGACAATTATGTTCCGGTTC
AAGATAGGTTGCCCGTCGAG

Product: regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MSEQSQMVVSRLGFDLQSLEIFIAVCKTGSMTAAAAYSDLTQSAVSRQIINLEKRLGVGLIERGSRPLKPTLAGQKLIKA
AEHLISEAAAIPTQLQGADTRMIPQFRLGLIDSLSDPLVPMLIKALRDRVGSVSVATGFMAPLRQRLLKRELDAVISADP
FDDVDGFERFELFQEQFVVLASRGEQPFGDEAEFRNFAARFPMIRSGTSSGIAQRVEQHFRRMKLDVPPAFSCETVESIV
SLVASGVGWSVLTPVCVRKCIALAPAIQVLQFPGAGFSRRIYLVVRRGELDPFARQLSVICRRIIQKSYIPQLAALAP

Sequences:

>Translated_318_residues
MSEQSQMVVSRLGFDLQSLEIFIAVCKTGSMTAAAAYSDLTQSAVSRQIINLEKRLGVGLIERGSRPLKPTLAGQKLIKA
AEHLISEAAAIPTQLQGADTRMIPQFRLGLIDSLSDPLVPMLIKALRDRVGSVSVATGFMAPLRQRLLKRELDAVISADP
FDDVDGFERFELFQEQFVVLASRGEQPFGDEAEFRNFAARFPMIRSGTSSGIAQRVEQHFRRMKLDVPPAFSCETVESIV
SLVASGVGWSVLTPVCVRKCIALAPAIQVLQFPGAGFSRRIYLVVRRGELDPFARQLSVICRRIIQKSYIPQLAALAP
>Mature_317_residues
SEQSQMVVSRLGFDLQSLEIFIAVCKTGSMTAAAAYSDLTQSAVSRQIINLEKRLGVGLIERGSRPLKPTLAGQKLIKAA
EHLISEAAAIPTQLQGADTRMIPQFRLGLIDSLSDPLVPMLIKALRDRVGSVSVATGFMAPLRQRLLKRELDAVISADPF
DDVDGFERFELFQEQFVVLASRGEQPFGDEAEFRNFAARFPMIRSGTSSGIAQRVEQHFRRMKLDVPPAFSCETVESIVS
LVASGVGWSVLTPVCVRKCIALAPAIQVLQFPGAGFSRRIYLVVRRGELDPFARQLSVICRRIIQKSYIPQLAALAP

Specific function: Unknown

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 34946; Mature: 34815

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEQSQMVVSRLGFDLQSLEIFIAVCKTGSMTAAAAYSDLTQSAVSRQIINLEKRLGVGL
CCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
IERGSRPLKPTLAGQKLIKAAEHLISEAAAIPTQLQGADTRMIPQFRLGLIDSLSDPLVP
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHCCCCHHH
MLIKALRDRVGSVSVATGFMAPLRQRLLKRELDAVISADPFDDVDGFERFELFQEQFVVL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
ASRGEQPFGDEAEFRNFAARFPMIRSGTSSGIAQRVEQHFRRMKLDVPPAFSCETVESIV
HHCCCCCCCCHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
SLVASGVGWSVLTPVCVRKCIALAPAIQVLQFPGAGFSRRIYLVVRRGELDPFARQLSVI
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHH
CRRIIQKSYIPQLAALAP
HHHHHHHHHCCHHHHCCC
>Mature Secondary Structure 
SEQSQMVVSRLGFDLQSLEIFIAVCKTGSMTAAAAYSDLTQSAVSRQIINLEKRLGVGL
CHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
IERGSRPLKPTLAGQKLIKAAEHLISEAAAIPTQLQGADTRMIPQFRLGLIDSLSDPLVP
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHCCCCHHH
MLIKALRDRVGSVSVATGFMAPLRQRLLKRELDAVISADPFDDVDGFERFELFQEQFVVL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
ASRGEQPFGDEAEFRNFAARFPMIRSGTSSGIAQRVEQHFRRMKLDVPPAFSCETVESIV
HHCCCCCCCCHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
SLVASGVGWSVLTPVCVRKCIALAPAIQVLQFPGAGFSRRIYLVVRRGELDPFARQLSVI
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHH
CRRIIQKSYIPQLAALAP
HHHHHHHHHCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8661945 [H]