Click here to switch to the map view.

The map label for this gene is 225853132

Identifier: 225853132

GI number: 225853132

Start: 1632937

End: 1633788

Strand: Direct

Name: 225853132

Synonym: BMEA_A1724

Alternate gene names: NA

Gene position: 1632937-1633788 (Clockwise)

Preceding gene: 225853131

Following gene: 225853137

Centisome position: 76.82

GC content: 61.62

Gene sequence:

>852_bases
ATGGATGCACCTGCGCCCGTCCACCCTCCCGTAAAGGTGGCCCGGACCGACAGCTACGATCATTCCTTCTGGCGTGATGC
GGGGCGCTGGCTCGGCGCGGGCATACTTGTGCTGTTGGTCCATGCGGCGGGGGCTTATGTCATCCACATGGCACAGGAAG
ACAATCAGCCGGAAGGCACAGAAGTCGCTGCCATGGTGGTGGAGCTGGTGCCTGATCTCGTTGCACCAGCAGAAGAGCGG
GTTTCCGAGGAAGTTCAGCCGGAAACGACCACCGAGCAGCCGGAAGAAGTGCAGCCCGAACCGGAGCCTGAACCCCAACC
GGAAGCCAAAGCTGAACCGCAACAGGTTCAGGAACCCGAAGAAGTGATACCGGATGTGGTGGAGGCTCAGAAGCCGGAAC
CCAAAAAGGTGGAGAAGCTCAAGCCGCAAAAGCCCAAGCCTGAAAAGGTGAAACCGAAGAAGGCGGAAAAGGCGGCGGAA
ACCCGTGAGGCCAGCGCACCGCGCGTGGATGCCGACAATGGTGCCAAGGTGGCGGCCAGCAAGAGGGGTGAAACTTCCGC
TTCCGCTGGCGTCATTTGGGCTAAATGGACGTCCAGGCTGCAATCTCATATGGCGCGGAATGCTCGTTTCCTGCAAGGCA
AGTCCCGCAACATCAGGGGGGAAGCGCATGTCGCCTTTGTGATCGACCCTTCGGGGAATGTGCTTTCGGCCCGTATTGCG
GTCTCGTCGGGCGACCCAGCGGTGGATCAGCTTGCGTTGGAGGCCGCGCGCCGCGCCTCGCCTGTGCCTGCCCCGCCCGC
AGCTATCGCCAAGGCGCGCATGCCGATCACCATGCCGCTTCTGTTCAAGTAA

Upstream 100 bases:

>100_bases
TTGCGCTGGTTGGACTTGAAACGGTTGGTGCGGATCAGCCGAATGCCGCGCCGGCGTCGCCAGCGGCAGGCCCGGCAATT
GCTCCTGAGGGGGCTGCGCA

Downstream 100 bases:

>100_bases
GCAGAGGAAAAAGCCGCTCCGAACCGAAGCGGCTTTTTTCATTTATTCGATCAGGGCGAACATCGGTCCATATCCGCCAT
GCCAGGACATATCATTTCTA

Product: TonB family C-terminal domain-containing protein

Products: NA

Alternate protein names: NB-Dependent Receptor; NB Family Protein

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MDAPAPVHPPVKVARTDSYDHSFWRDAGRWLGAGILVLLVHAAGAYVIHMAQEDNQPEGTEVAAMVVELVPDLVAPAEER
VSEEVQPETTTEQPEEVQPEPEPEPQPEAKAEPQQVQEPEEVIPDVVEAQKPEPKKVEKLKPQKPKPEKVKPKKAEKAAE
TREASAPRVDADNGAKVAASKRGETSASAGVIWAKWTSRLQSHMARNARFLQGKSRNIRGEAHVAFVIDPSGNVLSARIA
VSSGDPAVDQLALEAARRASPVPAPPAAIAKARMPITMPLLFK

Sequences:

>Translated_283_residues
MDAPAPVHPPVKVARTDSYDHSFWRDAGRWLGAGILVLLVHAAGAYVIHMAQEDNQPEGTEVAAMVVELVPDLVAPAEER
VSEEVQPETTTEQPEEVQPEPEPEPQPEAKAEPQQVQEPEEVIPDVVEAQKPEPKKVEKLKPQKPKPEKVKPKKAEKAAE
TREASAPRVDADNGAKVAASKRGETSASAGVIWAKWTSRLQSHMARNARFLQGKSRNIRGEAHVAFVIDPSGNVLSARIA
VSSGDPAVDQLALEAARRASPVPAPPAAIAKARMPITMPLLFK
>Mature_283_residues
MDAPAPVHPPVKVARTDSYDHSFWRDAGRWLGAGILVLLVHAAGAYVIHMAQEDNQPEGTEVAAMVVELVPDLVAPAEER
VSEEVQPETTTEQPEEVQPEPEPEPQPEAKAEPQQVQEPEEVIPDVVEAQKPEPKKVEKLKPQKPKPEKVKPKKAEKAAE
TREASAPRVDADNGAKVAASKRGETSASAGVIWAKWTSRLQSHMARNARFLQGKSRNIRGEAHVAFVIDPSGNVLSARIA
VSSGDPAVDQLALEAARRASPVPAPPAAIAKARMPITMPLLFK

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30583; Mature: 30583

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAPAPVHPPVKVARTDSYDHSFWRDAGRWLGAGILVLLVHAAGAYVIHMAQEDNQPEGT
CCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHH
EVAAMVVELVPDLVAPAEERVSEEVQPETTTEQPEEVQPEPEPEPQPEAKAEPQQVQEPE
HHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHCCCHH
EVIPDVVEAQKPEPKKVEKLKPQKPKPEKVKPKKAEKAAETREASAPRVDADNGAKVAAS
HHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEC
KRGETSASAGVIWAKWTSRLQSHMARNARFLQGKSRNIRGEAHVAFVIDPSGNVLSARIA
CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEEEE
VSSGDPAVDQLALEAARRASPVPAPPAAIAKARMPITMPLLFK
ECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MDAPAPVHPPVKVARTDSYDHSFWRDAGRWLGAGILVLLVHAAGAYVIHMAQEDNQPEGT
CCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHH
EVAAMVVELVPDLVAPAEERVSEEVQPETTTEQPEEVQPEPEPEPQPEAKAEPQQVQEPE
HHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHCCCHH
EVIPDVVEAQKPEPKKVEKLKPQKPKPEKVKPKKAEKAAETREASAPRVDADNGAKVAAS
HHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEC
KRGETSASAGVIWAKWTSRLQSHMARNARFLQGKSRNIRGEAHVAFVIDPSGNVLSARIA
CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEEEE
VSSGDPAVDQLALEAARRASPVPAPPAAIAKARMPITMPLLFK
ECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA