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The map label for this gene is dppC [H]

Identifier: 225853059

GI number: 225853059

Start: 1552508

End: 1553416

Strand: Reverse

Name: dppC [H]

Synonym: BMEA_A1637

Alternate gene names: 225853059

Gene position: 1553416-1552508 (Counterclockwise)

Preceding gene: 225853060

Following gene: 225853058

Centisome position: 73.08

GC content: 58.53

Gene sequence:

>909_bases
ATGACACACTCAACTATTCAGCCGGAAGCCGTGAAGGACGTAGGCACGCTTCGTGCATTGCGGGACTTCTGGTTTTATTT
CAGCGTCAATCGCGGTGCTGTTATCGGCCTCGTTGTTTTTACGGCGCTGGTTCTTGTTGCAATCTTTGCGCCGGTTCTTG
CCCCGCATAACCCGTCGGAACAGTTCCGCGATTTCATGCTCGTGCCGCCCTTCTGGGAAGAGGGCGGTTCAACCCAGTTC
CTCCTTGGAACGGATGCGGTCGGCCGCGATATTCTTTCGCGCCTGATCTATGGCGCGCAATATTCGCTGCTCGTTGGCTT
CGTTATCGTCATCATCTCCATGAGCCTCGGCATCGCCATCGGCGTGTTTTCCGGCTATATGGGCGGTGGCGTCGATACGG
TCGCCATGCGCATCATGGACGTCATGCTGGCATTCCCGTCGCTTTTGCTGGCGCTGGTTCTCGTCGCCATTCTCGGGCCG
GGGCTGATTAATGCGGTTCTGGCGATCACTCTGGTTCTGCTGCCGCATTTTTCGCGCCTTACCCGCGCGGCCGTCATGGC
GGAAAAGGAACGTGAATATGCAACGGCGGCCAAGCTTGCCGGTGCAGGCAAGTTGCGCCTGATGTTCAAGACCATCCTGC
CAAACTGCCTTGCGCCGCTGGTGGTGCAGGCCACGATGTCGTTTTCCAATGCCATCCTCGACGTTGCGGCACTTGGCTTT
CTTGGCATGGGGGCCCAACCGCCAACGCCTGAATGGGGCACGATGCTTGCCGAAGCACGCGAGTTCATCATGCGCGCCTG
GTGGGTCGTCACGTTCCCCGGCCTTGCGATCCTCATCACTGTTCTCGCCATCAATCTGATCGGCGACGGTCTGCGCGATG
CGCTTGATCCGAAGCTAAAGCGGAGTTGA

Upstream 100 bases:

>100_bases
GGGCTTCTGCTGATCGCCTTCATCATTATGGTTGTGAATCTGGTCGTGGACCTGCTTTACGGCCTCATCAACCCGCGTAT
CCGGCACAAGTGAGGGGAAT

Downstream 100 bases:

>100_bases
TCGAAGTGCTACTCGATATTAAAAATCTCACGGTTTCCTTCGATACATCCACTGGCCCGTTCAAGGCGGTGGACGGGATC
GACATCACCGTTAACAAGGG

Product: dipeptide transport system permease DppC

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MTHSTIQPEAVKDVGTLRALRDFWFYFSVNRGAVIGLVVFTALVLVAIFAPVLAPHNPSEQFRDFMLVPPFWEEGGSTQF
LLGTDAVGRDILSRLIYGAQYSLLVGFVIVIISMSLGIAIGVFSGYMGGGVDTVAMRIMDVMLAFPSLLLALVLVAILGP
GLINAVLAITLVLLPHFSRLTRAAVMAEKEREYATAAKLAGAGKLRLMFKTILPNCLAPLVVQATMSFSNAILDVAALGF
LGMGAQPPTPEWGTMLAEAREFIMRAWWVVTFPGLAILITVLAINLIGDGLRDALDPKLKRS

Sequences:

>Translated_302_residues
MTHSTIQPEAVKDVGTLRALRDFWFYFSVNRGAVIGLVVFTALVLVAIFAPVLAPHNPSEQFRDFMLVPPFWEEGGSTQF
LLGTDAVGRDILSRLIYGAQYSLLVGFVIVIISMSLGIAIGVFSGYMGGGVDTVAMRIMDVMLAFPSLLLALVLVAILGP
GLINAVLAITLVLLPHFSRLTRAAVMAEKEREYATAAKLAGAGKLRLMFKTILPNCLAPLVVQATMSFSNAILDVAALGF
LGMGAQPPTPEWGTMLAEAREFIMRAWWVVTFPGLAILITVLAINLIGDGLRDALDPKLKRS
>Mature_301_residues
THSTIQPEAVKDVGTLRALRDFWFYFSVNRGAVIGLVVFTALVLVAIFAPVLAPHNPSEQFRDFMLVPPFWEEGGSTQFL
LGTDAVGRDILSRLIYGAQYSLLVGFVIVIISMSLGIAIGVFSGYMGGGVDTVAMRIMDVMLAFPSLLLALVLVAILGPG
LINAVLAITLVLLPHFSRLTRAAVMAEKEREYATAAKLAGAGKLRLMFKTILPNCLAPLVVQATMSFSNAILDVAALGFL
GMGAQPPTPEWGTMLAEAREFIMRAWWVVTFPGLAILITVLAINLIGDGLRDALDPKLKRS

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789964, Length=282, Percent_Identity=65.2482269503546, Blast_Score=333, Evalue=6e-93,
Organism=Escherichia coli, GI1787760, Length=265, Percent_Identity=44.9056603773585, Blast_Score=229, Evalue=2e-61,
Organism=Escherichia coli, GI1787549, Length=276, Percent_Identity=43.8405797101449, Blast_Score=221, Evalue=4e-59,
Organism=Escherichia coli, GI1787054, Length=295, Percent_Identity=41.0169491525424, Blast_Score=220, Evalue=1e-58,
Organism=Escherichia coli, GI1789889, Length=221, Percent_Identity=39.3665158371041, Blast_Score=163, Evalue=1e-41,
Organism=Escherichia coli, GI1787498, Length=272, Percent_Identity=33.8235294117647, Blast_Score=139, Evalue=2e-34,
Organism=Escherichia coli, GI1788505, Length=225, Percent_Identity=31.5555555555556, Blast_Score=104, Evalue=7e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32548; Mature: 32417

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHSTIQPEAVKDVGTLRALRDFWFYFSVNRGAVIGLVVFTALVLVAIFAPVLAPHNPSE
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHH
QFRDFMLVPPFWEEGGSTQFLLGTDAVGRDILSRLIYGAQYSLLVGFVIVIISMSLGIAI
HHHCCCCCCCHHCCCCCEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
GVFSGYMGGGVDTVAMRIMDVMLAFPSLLLALVLVAILGPGLINAVLAITLVLLPHFSRL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
TRAAVMAEKEREYATAAKLAGAGKLRLMFKTILPNCLAPLVVQATMSFSNAILDVAALGF
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGMGAQPPTPEWGTMLAEAREFIMRAWWVVTFPGLAILITVLAINLIGDGLRDALDPKLK
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RS
CC
>Mature Secondary Structure 
THSTIQPEAVKDVGTLRALRDFWFYFSVNRGAVIGLVVFTALVLVAIFAPVLAPHNPSE
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHH
QFRDFMLVPPFWEEGGSTQFLLGTDAVGRDILSRLIYGAQYSLLVGFVIVIISMSLGIAI
HHHCCCCCCCHHCCCCCEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
GVFSGYMGGGVDTVAMRIMDVMLAFPSLLLALVLVAILGPGLINAVLAITLVLLPHFSRL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
TRAAVMAEKEREYATAAKLAGAGKLRLMFKTILPNCLAPLVVQATMSFSNAILDVAALGF
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGMGAQPPTPEWGTMLAEAREFIMRAWWVVTFPGLAILITVLAINLIGDGLRDALDPKLK
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800; 8550458 [H]