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The map label for this gene is choX

Identifier: 225853054

GI number: 225853054

Start: 1547426

End: 1548394

Strand: Direct

Name: choX

Synonym: BMEA_A1632

Alternate gene names: NA

Gene position: 1547426-1548394 (Clockwise)

Preceding gene: 225853050

Following gene: 225853055

Centisome position: 72.8

GC content: 56.35

Gene sequence:

>969_bases
ATGAAGCACGTATCGACCTGCATGTTTACGCTTGCCCTGGGTGGCTTTGCCATGGGAACGGCAATGCTAAGCACCCCGGA
AATCGGCCTTGCGGCTGAGCCAGCGAGTTGCTCGACCGTCCGCTTCTCCGATGTCGGCTGGACCGACATCACCTCGACAA
CGGCGGTCGCAACCGAAATTCTCAAAGGTCTGGGCTACACGACCGATATCAAGGTTCTCTCCGTGCCGGTAACCTATGCA
TCGGTCGCCAAAAAGGACATCGACGTCTTCCTTGGCTACTGGAACCCATCCATGAGCGCCGATCTCCAGCCCTATCTGGA
CAACAAGACCGTTGAGACGCTGCGCACCAACCTGACCGGCGCAAAATATACGCTCGCCGTGCCGCAATTTGTCTTTGATG
AAGGGCTGAAGGATTTCAAGGATATTGCCAAATTCAAGGACAAGCTCGGCGGCAAGATCTACGGCATCGAGCCCGGCAAT
GACGGCAACCGTCTGATCCTCAGCATGATCAACAAGAATGCCTTTGGCCTCAAATCCTTTGAACTGGCCGAATCGTCCGA
ACAGGGAATGCTTGCGCAGGTCGCCCGCAGCATCAAGAGCAAGGACCCCATCGTCTTTCTCGCCTGGGAACCGCACCCCA
TGAACAAGCGCTTCAAGATAGCCTATCTCACCGGCGGCGATGATTTCTTCGGCCCGAATCTGGGCGGCGCCAAAGTTGAG
ACCAATGTGCGCACCGGCTACACGCAGGAATGCCCCAATGTTGGCAAGTTCCTCACCAATCTCGAATTCAACCTCGATAT
GGAAAACGACATTATGGGCAAAATCCTCGATGACGGCGAAGAGCCTGCGAAGGCGGCCACCGAATGGTTGAAAGCCAATC
CGGGCGTTCTCAACCAATGGCTTGCAGGCGTTACCACCGTTGACGGCAAGGAAGGCCTGCCTGCCGTCAGATCGGCCCTC
GGCCTCTGA

Upstream 100 bases:

>100_bases
CCGCTATGGTACTTGAATGGCGAAATCTTTGGTGTTTGCTAAAGCTAGGACCGGAAAAAACAATCAATCCGTCAAAAACG
GCCGGTAAATGGAGAGAAGA

Downstream 100 bases:

>100_bases
TCCTGAATATCAACAGGGTCGCGGGCAAACCGCGGCCTTAAAATTATGCCCCCCTCCCACAAGAGGCACGCAGCAGGAGA
CTTGATCGTTGAACTGGCTG

Product: choline ABC transporter periplasmic binding protein

Products: NA

Alternate protein names: Fragment [H]

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MKHVSTCMFTLALGGFAMGTAMLSTPEIGLAAEPASCSTVRFSDVGWTDITSTTAVATEILKGLGYTTDIKVLSVPVTYA
SVAKKDIDVFLGYWNPSMSADLQPYLDNKTVETLRTNLTGAKYTLAVPQFVFDEGLKDFKDIAKFKDKLGGKIYGIEPGN
DGNRLILSMINKNAFGLKSFELAESSEQGMLAQVARSIKSKDPIVFLAWEPHPMNKRFKIAYLTGGDDFFGPNLGGAKVE
TNVRTGYTQECPNVGKFLTNLEFNLDMENDIMGKILDDGEEPAKAATEWLKANPGVLNQWLAGVTTVDGKEGLPAVRSAL
GL

Sequences:

>Translated_322_residues
MKHVSTCMFTLALGGFAMGTAMLSTPEIGLAAEPASCSTVRFSDVGWTDITSTTAVATEILKGLGYTTDIKVLSVPVTYA
SVAKKDIDVFLGYWNPSMSADLQPYLDNKTVETLRTNLTGAKYTLAVPQFVFDEGLKDFKDIAKFKDKLGGKIYGIEPGN
DGNRLILSMINKNAFGLKSFELAESSEQGMLAQVARSIKSKDPIVFLAWEPHPMNKRFKIAYLTGGDDFFGPNLGGAKVE
TNVRTGYTQECPNVGKFLTNLEFNLDMENDIMGKILDDGEEPAKAATEWLKANPGVLNQWLAGVTTVDGKEGLPAVRSAL
GL
>Mature_322_residues
MKHVSTCMFTLALGGFAMGTAMLSTPEIGLAAEPASCSTVRFSDVGWTDITSTTAVATEILKGLGYTTDIKVLSVPVTYA
SVAKKDIDVFLGYWNPSMSADLQPYLDNKTVETLRTNLTGAKYTLAVPQFVFDEGLKDFKDIAKFKDKLGGKIYGIEPGN
DGNRLILSMINKNAFGLKSFELAESSEQGMLAQVARSIKSKDPIVFLAWEPHPMNKRFKIAYLTGGDDFFGPNLGGAKVE
TNVRTGYTQECPNVGKFLTNLEFNLDMENDIMGKILDDGEEPAKAATEWLKANPGVLNQWLAGVTTVDGKEGLPAVRSAL
GL

Specific function: Unknown

COG id: COG2113

COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 34861; Mature: 34861

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHVSTCMFTLALGGFAMGTAMLSTPEIGLAAEPASCSTVRFSDVGWTDITSTTAVATEI
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCEEEECCCCCCCCCHHHHHHHHH
LKGLGYTTDIKVLSVPVTYASVAKKDIDVFLGYWNPSMSADLQPYLDNKTVETLRTNLTG
HHHCCCCCCEEEEEECCHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCC
AKYTLAVPQFVFDEGLKDFKDIAKFKDKLGGKIYGIEPGNDGNRLILSMINKNAFGLKSF
CEEEEECHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEECCCCCCCCCCC
ELAESSEQGMLAQVARSIKSKDPIVFLAWEPHPMNKRFKIAYLTGGDDFFGPNLGGAKVE
HHCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCEEE
TNVRTGYTQECPNVGKFLTNLEFNLDMENDIMGKILDDGEEPAKAATEWLKANPGVLNQW
CCCCCCCCCCCCCHHHHHHCCEEECCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHH
LAGVTTVDGKEGLPAVRSALGL
HHCCEECCCCCCCHHHHHHHCC
>Mature Secondary Structure
MKHVSTCMFTLALGGFAMGTAMLSTPEIGLAAEPASCSTVRFSDVGWTDITSTTAVATEI
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCEEEECCCCCCCCCHHHHHHHHH
LKGLGYTTDIKVLSVPVTYASVAKKDIDVFLGYWNPSMSADLQPYLDNKTVETLRTNLTG
HHHCCCCCCEEEEEECCHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCC
AKYTLAVPQFVFDEGLKDFKDIAKFKDKLGGKIYGIEPGNDGNRLILSMINKNAFGLKSF
CEEEEECHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEECCCCCCCCCCC
ELAESSEQGMLAQVARSIKSKDPIVFLAWEPHPMNKRFKIAYLTGGDDFFGPNLGGAKVE
HHCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCEEE
TNVRTGYTQECPNVGKFLTNLEFNLDMENDIMGKILDDGEEPAKAATEWLKANPGVLNQW
CCCCCCCCCCCCCHHHHHHCCEEECCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHH
LAGVTTVDGKEGLPAVRSALGL
HHCCEECCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10708384 [H]