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The map label for this gene is lpcC [H]

Identifier: 225852982

GI number: 225852982

Start: 1478055

End: 1479119

Strand: Reverse

Name: lpcC [H]

Synonym: BMEA_A1554

Alternate gene names: 225852982

Gene position: 1479119-1478055 (Counterclockwise)

Preceding gene: 225852983

Following gene: 225852978

Centisome position: 69.58

GC content: 57.56

Gene sequence:

>1065_bases
GTGACTTTATCAGGGCAAGTTCCGGTTCGGGAAGTTGAGGTCGTTGCACCCAACTTCAAGCGCCGCCTTTCCGGCGTGAC
CTCGACGATTGTTCAGCTCATTCCATTGCAGCGCGCAATGGGGCTGAAAATTGCCACTATGGGGCCGGGCCTGCCTGACA
CTCTCCCGCATCTTGGATGGAGCGCGTTGCCCTCCTTCTGGTCGCGACCTAAAACCAGACGGTTTCGCATCTGGCATGCG
CGCCGCAACATTGAAATGCTTGCCGGAATTTTCATGCGGGATGTCCTGCGCATGAAACTGCGGCTCGTTTTTACCTCGGC
CGCCCAGCGCCATCACAAACCTTTCACTAAATGGCTCATCCGCCGCATGAATGCGGTGATCGCGACAAGTGTGCGTTCGG
GAAGTTTTCTCGAAGTCCCGCATCAGGTCATCATGCATGGTGTCGATCTGGAACGGTTTCACCCGCCTCTTGCGGAGGAC
GATGATTTTTCCGCTTCCGGCCTGCCGGGTAAATATGCCGTAGGGTGTTTTGGACGGGTTCGGCCTTCAAAAGGAACGGA
CCTTTTCGTTGATGCGATGATCGCGCTCCTGCCGAAATATCCTGACTGGACGGCCATTGTCACGGGGCGCACAACCGCCG
AATATCAGGCCTTTGAAGCCGAGCTGCGCACCAGGATTGCGGCAGCCGGTTTGCAGGACCGTATTCTTATTCTGGGCGAA
GTGCCGGACGTGCGCGTCTGGTATCGCCGGCTCACGCTTTACGTCGCGCCTTCCCGCAATGAAGGCTTTGGCCTGACGCC
GCTTGAAGCCATGGCCTCGAAAACAGCCGTCGTTGCCAGTGATGCCGGGGCTTATGCGGAAATGGTCGTTGAGGATACGG
GCCGCTTTGTGCCAGCCGGTGACGGGCGCGCATTGACGAACGCCATCGAACCTTATCTGGCCGATCCGGCCATGACAAAA
CGCTGCGGCGAAAATGCTCTGGCGCATGTTCGCGAAGCCTTTCCGCTCCAAAAGGAAGCGGCTGCTATCAGCAGCGTTTA
TGAGCAGGTTTTCGCAGGAAGATAA

Upstream 100 bases:

>100_bases
CGCCCTTATCGGCAAGGGCGAAGGCGACACAATTGAGGTCAACGCACCGGGCGGCTCGCGTTCCTACGAAATCATCGCTT
TGAAATTCGTCTGATTTTCC

Downstream 100 bases:

>100_bases
TCCGGGTCAGAGGATCATCAACGGTTCGTCCTTGACGGGACGAATGGTGAGGGCTGTGCGTACCGAATCCACGTTTGGAG
CGGCGGTCAGTTCCTCGATC

Product: lipopolysaccharide core biosynthesis mannosyltransferase lpcC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MTLSGQVPVREVEVVAPNFKRRLSGVTSTIVQLIPLQRAMGLKIATMGPGLPDTLPHLGWSALPSFWSRPKTRRFRIWHA
RRNIEMLAGIFMRDVLRMKLRLVFTSAAQRHHKPFTKWLIRRMNAVIATSVRSGSFLEVPHQVIMHGVDLERFHPPLAED
DDFSASGLPGKYAVGCFGRVRPSKGTDLFVDAMIALLPKYPDWTAIVTGRTTAEYQAFEAELRTRIAAAGLQDRILILGE
VPDVRVWYRRLTLYVAPSRNEGFGLTPLEAMASKTAVVASDAGAYAEMVVEDTGRFVPAGDGRALTNAIEPYLADPAMTK
RCGENALAHVREAFPLQKEAAAISSVYEQVFAGR

Sequences:

>Translated_354_residues
MTLSGQVPVREVEVVAPNFKRRLSGVTSTIVQLIPLQRAMGLKIATMGPGLPDTLPHLGWSALPSFWSRPKTRRFRIWHA
RRNIEMLAGIFMRDVLRMKLRLVFTSAAQRHHKPFTKWLIRRMNAVIATSVRSGSFLEVPHQVIMHGVDLERFHPPLAED
DDFSASGLPGKYAVGCFGRVRPSKGTDLFVDAMIALLPKYPDWTAIVTGRTTAEYQAFEAELRTRIAAAGLQDRILILGE
VPDVRVWYRRLTLYVAPSRNEGFGLTPLEAMASKTAVVASDAGAYAEMVVEDTGRFVPAGDGRALTNAIEPYLADPAMTK
RCGENALAHVREAFPLQKEAAAISSVYEQVFAGR
>Mature_353_residues
TLSGQVPVREVEVVAPNFKRRLSGVTSTIVQLIPLQRAMGLKIATMGPGLPDTLPHLGWSALPSFWSRPKTRRFRIWHAR
RNIEMLAGIFMRDVLRMKLRLVFTSAAQRHHKPFTKWLIRRMNAVIATSVRSGSFLEVPHQVIMHGVDLERFHPPLAEDD
DFSASGLPGKYAVGCFGRVRPSKGTDLFVDAMIALLPKYPDWTAIVTGRTTAEYQAFEAELRTRIAAAGLQDRILILGEV
PDVRVWYRRLTLYVAPSRNEGFGLTPLEAMASKTAVVASDAGAYAEMVVEDTGRFVPAGDGRALTNAIEPYLADPAMTKR
CGENALAHVREAFPLQKEAAAISSVYEQVFAGR

Specific function: Acts at transfer of mannose group to a 3-deoxy-D-mono octulonic acid (KDO) via an alpha-1,5 linkage [H]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 39238; Mature: 39107

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLSGQVPVREVEVVAPNFKRRLSGVTSTIVQLIPLQRAMGLKIATMGPGLPDTLPHLGW
CCCCCCCCHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHCCH
SALPSFWSRPKTRRFRIWHARRNIEMLAGIFMRDVLRMKLRLVFTSAAQRHHKPFTKWLI
HHHHHHHCCCCCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
RRMNAVIATSVRSGSFLEVPHQVIMHGVDLERFHPPLAEDDDFSASGLPGKYAVGCFGRV
HHHHHHHHHHCCCCCCHHCCHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCEECCCCCC
RPSKGTDLFVDAMIALLPKYPDWTAIVTGRTTAEYQAFEAELRTRIAAAGLQDRILILGE
CCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEC
VPDVRVWYRRLTLYVAPSRNEGFGLTPLEAMASKTAVVASDAGAYAEMVVEDTGRFVPAG
CCCHHHHEEEEEEEECCCCCCCCCCCHHHHHHCCCEEEECCCCHHHHHHHHHCCCEEECC
DGRALTNAIEPYLADPAMTKRCGENALAHVREAFPLQKEAAAISSVYEQVFAGR
CCCHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TLSGQVPVREVEVVAPNFKRRLSGVTSTIVQLIPLQRAMGLKIATMGPGLPDTLPHLGW
CCCCCCCHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHCCH
SALPSFWSRPKTRRFRIWHARRNIEMLAGIFMRDVLRMKLRLVFTSAAQRHHKPFTKWLI
HHHHHHHCCCCCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
RRMNAVIATSVRSGSFLEVPHQVIMHGVDLERFHPPLAEDDDFSASGLPGKYAVGCFGRV
HHHHHHHHHHCCCCCCHHCCHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCEECCCCCC
RPSKGTDLFVDAMIALLPKYPDWTAIVTGRTTAEYQAFEAELRTRIAAAGLQDRILILGE
CCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEC
VPDVRVWYRRLTLYVAPSRNEGFGLTPLEAMASKTAVVASDAGAYAEMVVEDTGRFVPAG
CCCHHHHEEEEEEEECCCCCCCCCCCHHHHHHCCCEEEECCCCHHHHHHHHHCCCEEECC
DGRALTNAIEPYLADPAMTKRCGENALAHVREAFPLQKEAAAISSVYEQVFAGR
CCCHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9756877 [H]