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The map label for this gene is clpS [H]

Identifier: 225852667

GI number: 225852667

Start: 1168872

End: 1169222

Strand: Reverse

Name: clpS [H]

Synonym: BMEA_A1213

Alternate gene names: 225852667

Gene position: 1169222-1168872 (Counterclockwise)

Preceding gene: 225852671

Following gene: 225852666

Centisome position: 55.0

GC content: 52.42

Gene sequence:

>351_bases
ATGAGGCGCTTCAATACAATCATGCAGGGCAAGACCAATGGGGGGAACGGGCCGGAAAGCGGCACCGTTGTCGTGACGCG
CACGCAGCCGAAAACCAGAAAACCCAGTCTTTACCGCGTTCTGCTTCTTAATGACGACTACACTCCGATGGAGTTTGTCG
TGCATGTCCTGCAACGGTTTTTCCAGAAAAATCTGGACGATGCGACACGCATCATGCTGCATGTTCACAATCATGGTGTC
GGCGAGTGTGGCGTGTTCACTTACGAGGTTGCCGAAACCAAAGTCAGTCAGGTCATGGATTTCGCCCGTCAAAACCAGCA
TCCGCTGCAATGCGTGATGGAGAAAAAGTGA

Upstream 100 bases:

>100_bases
TCCCGGTTGCAAGTGATGGCGAAGGGCTTAAAATCCCCATATGACGTCCTACATATTAGGGCAGGCAGAGCCATATGAAT
GGGCATCGAGTGATAGGTTT

Downstream 100 bases:

>100_bases
GGTCATATGCCATCGTTCTCCCCCAGCCTTGAAAGGGCGCTGCATCAGGCCCTCACCATCGCAAACGAGCGGCACCACGA
ATATGCCACCCTCGAACATC

Product: ATP-dependent Clp protease adaptor protein ClpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MRRFNTIMQGKTNGGNGPESGTVVVTRTQPKTRKPSLYRVLLLNDDYTPMEFVVHVLQRFFQKNLDDATRIMLHVHNHGV
GECGVFTYEVAETKVSQVMDFARQNQHPLQCVMEKK

Sequences:

>Translated_116_residues
MRRFNTIMQGKTNGGNGPESGTVVVTRTQPKTRKPSLYRVLLLNDDYTPMEFVVHVLQRFFQKNLDDATRIMLHVHNHGV
GECGVFTYEVAETKVSQVMDFARQNQHPLQCVMEKK
>Mature_116_residues
MRRFNTIMQGKTNGGNGPESGTVVVTRTQPKTRKPSLYRVLLLNDDYTPMEFVVHVLQRFFQKNLDDATRIMLHVHNHGV
GECGVFTYEVAETKVSQVMDFARQNQHPLQCVMEKK

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation [H]

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family [H]

Homologues:

Organism=Escherichia coli, GI1787108, Length=106, Percent_Identity=50, Blast_Score=114, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719 [H]

Pfam domain/function: PF02617 ClpS [H]

EC number: NA

Molecular weight: Translated: 13338; Mature: 13338

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRFNTIMQGKTNGGNGPESGTVVVTRTQPKTRKPSLYRVLLLNDDYTPMEFVVHVLQRF
CCCCHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHH
FQKNLDDATRIMLHVHNHGVGECGVFTYEVAETKVSQVMDFARQNQHPLQCVMEKK
HHCCCCCHHEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCHHEECCC
>Mature Secondary Structure
MRRFNTIMQGKTNGGNGPESGTVVVTRTQPKTRKPSLYRVLLLNDDYTPMEFVVHVLQRF
CCCCHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHH
FQKNLDDATRIMLHVHNHGVGECGVFTYEVAETKVSQVMDFARQNQHPLQCVMEKK
HHCCCCCHHEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA