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The map label for this gene is omp25 [H]

Identifier: 225852477

GI number: 225852477

Start: 960341

End: 961051

Strand: Direct

Name: omp25 [H]

Synonym: BMEA_A1009

Alternate gene names: 225852477

Gene position: 960341-961051 (Clockwise)

Preceding gene: 225852476

Following gene: 225852479

Centisome position: 45.18

GC content: 51.9

Gene sequence:

>711_bases
GTGAACATTAAATCGCTTCTTCTTGCATCAACTGTCGTTCTCGTTGCTGCGACTGGCGCAAAGGCTGCTGACGCCGTCAT
TGAACAGGAACCTGCACCGGTTGTTGTTGCTCCGACCTTCACCTGGAATGGCGCCTATCTCGGCGGCCAGATCGGTTATG
GTTGGGGCCGTTCGACGCTGAGCGATGAAGACACATCTATCCGAGTAAAGCCAGACGGTTTCCTCGGCGGTCTTTATGCC
GGTTATAACTTTGACATGGGGAACAACTTCGTCCTCGGTGTTGACGGTGACATTACCTATAATGATCTAGATGCTAGCCA
CAGTGACACCGACCCAGATCTTGATCTCACCACTGGTGTTGACAGCAAGCTCCGCTGGTCAGGCGCTGTTCGCGCTCGCA
TGGGTGTCGCAATGGATCGATGGATGCCATACATTGCCGGTGGTGTGGCCTTCGGAAACGTTAAGAATTCAGTTTCACTC
ACGGACGGTATAGAGAGCATTGGGGTTTCTCAGAGCAAGACTATGACTGGCTGGGCCGCTGGCGCTGGTGTTGATTACGC
GGCAACTGACAATGTCATCGTACGTCTTGAATATCGTTATACCGACTACGGCCATAAGGATTTCAGTGTAGTTGATGGCG
ATCTCAGCGTTGAGGCTCGCAACAAGTTTAAGACACACGACATCCGATTGGGCGTAGCTTACAAGTTCTAA

Upstream 100 bases:

>100_bases
ATGAGCGTTATGGTTGCAAGTGTTGCTGAAAAACTACAGACATTTCACTCGGATGATATAATTAAGAGATCAATGAATAT
TGGAATGTTTGGAGGGAACC

Downstream 100 bases:

>100_bases
TCTGATATTTGATCAGATATAGAGCCGCCTTGTTCGCAGGGCGGCTTTTTTATTCGAGGCTCTGCCTCAACGGAATGCGA
TGGCGTTTCGCACATCGAGC

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MNIKSLLLASTVVLVAATGAKAADAVIEQEPAPVVVAPTFTWNGAYLGGQIGYGWGRSTLSDEDTSIRVKPDGFLGGLYA
GYNFDMGNNFVLGVDGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAVRARMGVAMDRWMPYIAGGVAFGNVKNSVSL
TDGIESIGVSQSKTMTGWAAGAGVDYAATDNVIVRLEYRYTDYGHKDFSVVDGDLSVEARNKFKTHDIRLGVAYKF

Sequences:

>Translated_236_residues
MNIKSLLLASTVVLVAATGAKAADAVIEQEPAPVVVAPTFTWNGAYLGGQIGYGWGRSTLSDEDTSIRVKPDGFLGGLYA
GYNFDMGNNFVLGVDGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAVRARMGVAMDRWMPYIAGGVAFGNVKNSVSL
TDGIESIGVSQSKTMTGWAAGAGVDYAATDNVIVRLEYRYTDYGHKDFSVVDGDLSVEARNKFKTHDIRLGVAYKF
>Mature_236_residues
MNIKSLLLASTVVLVAATGAKAADAVIEQEPAPVVVAPTFTWNGAYLGGQIGYGWGRSTLSDEDTSIRVKPDGFLGGLYA
GYNFDMGNNFVLGVDGDITYNDLDASHSDTDPDLDLTTGVDSKLRWSGAVRARMGVAMDRWMPYIAGGVAFGNVKNSVSL
TDGIESIGVSQSKTMTGWAAGAGVDYAATDNVIVRLEYRYTDYGHKDFSVVDGDLSVEARNKFKTHDIRLGVAYKF

Specific function: Unknown

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the omp25/ropB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR000498 [H]

Pfam domain/function: PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 25242; Mature: 25242

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIKSLLLASTVVLVAATGAKAADAVIEQEPAPVVVAPTFTWNGAYLGGQIGYGWGRSTL
CCHHHHHHHHEEEEEEECCCCHHHHHHHCCCCCEEEEECEEECCEEECCEEECCCCCCCC
SDEDTSIRVKPDGFLGGLYAGYNFDMGNNFVLGVDGDITYNDLDASHSDTDPDLDLTTGV
CCCCCEEEECCCCCEEEEEECEEECCCCCEEEEECCCEEECCCCCCCCCCCCCCEEECCC
DSKLRWSGAVRARMGVAMDRWMPYIAGGVAFGNVKNSVSLTDGIESIGVSQSKTMTGWAA
CCCEEECCCHHHHHHHHHHHHHHHHHCCEEECCCCCCEEECCCHHHCCCCCCCEEEEEEC
GAGVDYAATDNVIVRLEYRYTDYGHKDFSVVDGDLSVEARNKFKTHDIRLGVAYKF
CCCCCEEECCCEEEEEEEEECCCCCCCEEEECCCEEEEECCCEEEEEEEEEEEEEC
>Mature Secondary Structure
MNIKSLLLASTVVLVAATGAKAADAVIEQEPAPVVVAPTFTWNGAYLGGQIGYGWGRSTL
CCHHHHHHHHEEEEEEECCCCHHHHHHHCCCCCEEEEECEEECCEEECCEEECCCCCCCC
SDEDTSIRVKPDGFLGGLYAGYNFDMGNNFVLGVDGDITYNDLDASHSDTDPDLDLTTGV
CCCCCEEEECCCCCEEEEEECEEECCCCCEEEEECCCEEECCCCCCCCCCCCCCEEECCC
DSKLRWSGAVRARMGVAMDRWMPYIAGGVAFGNVKNSVSLTDGIESIGVSQSKTMTGWAA
CCCEEECCCHHHHHHHHHHHHHHHHHCCEEECCCCCCEEECCCHHHCCCCCCCEEEEEEC
GAGVDYAATDNVIVRLEYRYTDYGHKDFSVVDGDLSVEARNKFKTHDIRLGVAYKF
CCCCCEEECCCEEEEEEEEECCCCCCCEEEECCCEEEEECCCEEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7896724 [H]