Click here to switch to the map view.

The map label for this gene is yfdZ [C]

Identifier: 225852423

GI number: 225852423

Start: 903568

End: 904731

Strand: Direct

Name: yfdZ [C]

Synonym: BMEA_A0950

Alternate gene names: 225852423

Gene position: 903568-904731 (Clockwise)

Preceding gene: 225852416

Following gene: 225852425

Centisome position: 42.51

GC content: 59.19

Gene sequence:

>1164_bases
TTGACTACTCTTTCCAACCGCAGCGCGGTCGAGCCGTTTCACGCCATGGACGTTCTGGCTGAGGCGAACCGTCGGCGCGC
GGCGGGCCATCCGATCATTTCCATGGCGGTTGGCCAACCGGCTGATTCCACACCTGTGGTCGTTCGTCAGGCCGCAGAGC
GCGCGTTGAAAGATGGCCGCATCGGCTATACCGACGCTTTGGGCCTGATTGAACTGTGCGAGGCTATCGCCGCGCATTAT
GCGGATCATTACGGCGTCAGCGTGTCGCCGGAGCGGATTGCGGTCACGACCGGCTCTTCCGCCGCTTTCAATCTTGCATT
TATTGTCTATTTCGATCCCGGCGACCGGGTGGCGATAACGCGCCCCGGCTATCCGGCCTACCGCAACATCTTGACGGCGC
TTGATCTCGAAGTGGTGGAAATTCCCACCGGCCATGGAACATCCTCGTCGCTGACGGCGCAAGCACTTGCCGCCGCCCAT
GCTGAAAAACCCTTGAAGGGCGTTCTCTTTGCAAGCCCCGCCAACCCAACCGGAGCGGTTATCGACAAACCGGAACTGAC
GGCGATCATCGAGACGGCACGTAACCTCGGAATCCGGGTCATATCGGATGAAATCTATCATCGCCTGTCCTATGAAGCCG
ACGATGTAACCGCACTTGAAGTTGCCGACGACGTCACCATCATCAATTCCTTCTCCAAATATTACTGCATGACGGGCTGG
CGCATCGGCTGGATGGTTCTGCCGGACAACGATATCCGGGCGATTGAGCGCCTCAGCCAGAGCCTCTATATTTCCGCGCC
CGAACTGTCGCAGCGCGGCGCCATTGAGGCCTTCCGCGCCACTGCGGAACTGGAACGGATCAAGGATCGCTATCGCCGAA
ACAGGCTTATCCTGCTCAATCATCTGCCGCGCATGGGGCTTGATCTGGCTGCACCGATGGACGGCGCATTCTACGCCTAT
TGCGATGTGTCGCGTTTCACCAATGACAGCATGGAGTTTGTGCGCGGGATGATCTCCGAGATCAATATCGCCGCCACCCC
CGGCCGTGATTTCGATCCGCTGGACGGGCATCGCACCGTGCGTTTCTCCTACGCAGGCAAGGTCGAGGAAATGGAAGAGG
CTGTTCGGCGGCTTGACGACTGGTTGCCGCAGCAGAAAGCGTGA

Upstream 100 bases:

>100_bases
GTGAGGTCGCATTTTCTTGCAGCATCTCTGTTGCTTTCCCAATCTGGCGATTATACGGCGAGTTGCAAAGCTATGCGCAC
GCAAGTTTCTGGAGGCAAAG

Downstream 100 bases:

>100_bases
AGCAGCTCTGCCATACTTTGAAAGGGAGCCGTTCTGCGGCAAAAACATAAAGAAAAACCGGCGTTTCCGCCGGTTTTTTG
TCATCCGTAACAGGGCAGCG

Product: aminotransferase class I and II

Products: NA

Alternate protein names: AspAT; Transaminase A [H]

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MTTLSNRSAVEPFHAMDVLAEANRRRAAGHPIISMAVGQPADSTPVVVRQAAERALKDGRIGYTDALGLIELCEAIAAHY
ADHYGVSVSPERIAVTTGSSAAFNLAFIVYFDPGDRVAITRPGYPAYRNILTALDLEVVEIPTGHGTSSSLTAQALAAAH
AEKPLKGVLFASPANPTGAVIDKPELTAIIETARNLGIRVISDEIYHRLSYEADDVTALEVADDVTIINSFSKYYCMTGW
RIGWMVLPDNDIRAIERLSQSLYISAPELSQRGAIEAFRATAELERIKDRYRRNRLILLNHLPRMGLDLAAPMDGAFYAY
CDVSRFTNDSMEFVRGMISEINIAATPGRDFDPLDGHRTVRFSYAGKVEEMEEAVRRLDDWLPQQKA

Sequences:

>Translated_387_residues
MTTLSNRSAVEPFHAMDVLAEANRRRAAGHPIISMAVGQPADSTPVVVRQAAERALKDGRIGYTDALGLIELCEAIAAHY
ADHYGVSVSPERIAVTTGSSAAFNLAFIVYFDPGDRVAITRPGYPAYRNILTALDLEVVEIPTGHGTSSSLTAQALAAAH
AEKPLKGVLFASPANPTGAVIDKPELTAIIETARNLGIRVISDEIYHRLSYEADDVTALEVADDVTIINSFSKYYCMTGW
RIGWMVLPDNDIRAIERLSQSLYISAPELSQRGAIEAFRATAELERIKDRYRRNRLILLNHLPRMGLDLAAPMDGAFYAY
CDVSRFTNDSMEFVRGMISEINIAATPGRDFDPLDGHRTVRFSYAGKVEEMEEAVRRLDDWLPQQKA
>Mature_386_residues
TTLSNRSAVEPFHAMDVLAEANRRRAAGHPIISMAVGQPADSTPVVVRQAAERALKDGRIGYTDALGLIELCEAIAAHYA
DHYGVSVSPERIAVTTGSSAAFNLAFIVYFDPGDRVAITRPGYPAYRNILTALDLEVVEIPTGHGTSSSLTAQALAAAHA
EKPLKGVLFASPANPTGAVIDKPELTAIIETARNLGIRVISDEIYHRLSYEADDVTALEVADDVTIINSFSKYYCMTGWR
IGWMVLPDNDIRAIERLSQSLYISAPELSQRGAIEAFRATAELERIKDRYRRNRLILLNHLPRMGLDLAAPMDGAFYAYC
DVSRFTNDSMEFVRGMISEINIAATPGRDFDPLDGHRTVRFSYAGKVEEMEEAVRRLDDWLPQQKA

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI95147551, Length=397, Percent_Identity=23.4256926952141, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI169881279, Length=397, Percent_Identity=23.4256926952141, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI56713254, Length=403, Percent_Identity=25.0620347394541, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI56713256, Length=403, Percent_Identity=25.0620347394541, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI4507369, Length=350, Percent_Identity=25.4285714285714, Blast_Score=91, Evalue=2e-18,
Organism=Escherichia coli, GI1788722, Length=391, Percent_Identity=26.8542199488491, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1786816, Length=361, Percent_Identity=27.4238227146814, Blast_Score=106, Evalue=3e-24,
Organism=Escherichia coli, GI1788627, Length=386, Percent_Identity=26.4248704663212, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1787710, Length=328, Percent_Identity=27.4390243902439, Blast_Score=85, Evalue=7e-18,
Organism=Escherichia coli, GI1790797, Length=189, Percent_Identity=28.5714285714286, Blast_Score=73, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71994472, Length=267, Percent_Identity=26.5917602996255, Blast_Score=88, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI71994476, Length=267, Percent_Identity=26.5917602996255, Blast_Score=88, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI17567663, Length=383, Percent_Identity=25.065274151436, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17567369, Length=311, Percent_Identity=25.08038585209, Blast_Score=82, Evalue=4e-16,
Organism=Saccharomyces cerevisiae, GI6322401, Length=388, Percent_Identity=21.6494845360825, Blast_Score=84, Evalue=3e-17,
Organism=Drosophila melanogaster, GI28573069, Length=391, Percent_Identity=22.2506393861893, Blast_Score=92, Evalue=5e-19,
Organism=Drosophila melanogaster, GI24646114, Length=391, Percent_Identity=22.2506393861893, Blast_Score=92, Evalue=5e-19,
Organism=Drosophila melanogaster, GI28573067, Length=391, Percent_Identity=22.2506393861893, Blast_Score=92, Evalue=5e-19,
Organism=Drosophila melanogaster, GI28573065, Length=391, Percent_Identity=22.2506393861893, Blast_Score=92, Evalue=5e-19,
Organism=Drosophila melanogaster, GI18859735, Length=380, Percent_Identity=23.9473684210526, Blast_Score=87, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001176
- InterPro:   IPR004839
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.1 [H]

Molecular weight: Translated: 42588; Mature: 42457

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLSNRSAVEPFHAMDVLAEANRRRAAGHPIISMAVGQPADSTPVVVRQAAERALKDGR
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCC
IGYTDALGLIELCEAIAAHYADHYGVSVSPERIAVTTGSSAAFNLAFIVYFDPGDRVAIT
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEEEEECCCCEEEEE
RPGYPAYRNILTALDLEVVEIPTGHGTSSSLTAQALAAAHAEKPLKGVLFASPANPTGAV
CCCCHHHHHHHHHHCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCE
IDKPELTAIIETARNLGIRVISDEIYHRLSYEADDVTALEVADDVTIINSFSKYYCMTGW
ECCCHHHHHHHHHHHCCEEEECHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHEEECCC
RIGWMVLPDNDIRAIERLSQSLYISAPELSQRGAIEAFRATAELERIKDRYRRNRLILLN
EEEEEEECCCHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEE
HLPRMGLDLAAPMDGAFYAYCDVSRFTNDSMEFVRGMISEINIAATPGRDFDPLDGHRTV
CCCCCCCCCCCCCCCCEEEEEEHHHHCCHHHHHHHHHHHHCEEEECCCCCCCCCCCCEEE
RFSYAGKVEEMEEAVRRLDDWLPQQKA
EEEECCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TTLSNRSAVEPFHAMDVLAEANRRRAAGHPIISMAVGQPADSTPVVVRQAAERALKDGR
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCC
IGYTDALGLIELCEAIAAHYADHYGVSVSPERIAVTTGSSAAFNLAFIVYFDPGDRVAIT
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEEEEECCCCEEEEE
RPGYPAYRNILTALDLEVVEIPTGHGTSSSLTAQALAAAHAEKPLKGVLFASPANPTGAV
CCCCHHHHHHHHHHCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCE
IDKPELTAIIETARNLGIRVISDEIYHRLSYEADDVTALEVADDVTIINSFSKYYCMTGW
ECCCHHHHHHHHHHHCCEEEECHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHEEECCC
RIGWMVLPDNDIRAIERLSQSLYISAPELSQRGAIEAFRATAELERIKDRYRRNRLILLN
EEEEEEECCCHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEE
HLPRMGLDLAAPMDGAFYAYCDVSRFTNDSMEFVRGMISEINIAATPGRDFDPLDGHRTV
CCCCCCCCCCCCCCCCEEEEEEHHHHCCHHHHHHHHHHHHCEEEECCCCCCCCCCCCEEE
RFSYAGKVEEMEEAVRRLDDWLPQQKA
EEEECCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]