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The map label for this gene is yeaM [H]

Identifier: 225852178

GI number: 225852178

Start: 669175

End: 670014

Strand: Direct

Name: yeaM [H]

Synonym: BMEA_A0694

Alternate gene names: 225852178

Gene position: 669175-670014 (Clockwise)

Preceding gene: 225852176

Following gene: 225852179

Centisome position: 31.48

GC content: 58.33

Gene sequence:

>840_bases
ATGCCGGAGAATGAGGATCTGCAAAGGTTTCATGAACACCGCATCGCCATGCTGGAGAGCATGACAGGACCGGCAATCGC
CTTGCCGACGCGCTATCCGGACGGGTATTTCGTTCCGCGCCACAGCCATAGCCGGGCGCAGCTACTCTGTGCTTCGCAAG
GGGTGGTGCTGGTGACGACGGATGCGGGCCGCTGGATGATTCCGAGCGATCACGCCATGTGGATACCGGCAGGCGTGGAA
CACTCGGTGGCGATATTCGGCGATGTTTTCATGCGCTCCATCTATATCAGCGTTGATGCGATCTCCGGCGTTCCAAACTA
CCTGCATGTTGTGGGGCTGACTGATCTGATGCGGTGTCTCATTATCGATGCGACATCGCACGATAGTATCCCGGCGCCGG
AAAGCCGCGATGGACTGGTCATCGAACTGATTCTGCGTGATCTCCACACCCTGCCGGAATACCCGCTCGGCCTGCCATTT
CCTTCCGATCCCCGCTTGCAGAAGCTATGCCGGGATTTCGTGAAAAAGCCTTCTTCGCGTGCCACCATTGATGAATGGGC
AGACAGGATGGCAATGAGCCGGCGCTCTTTCACCCGGCATTTCCAGCGCGAAACCGGGGTGAGTCTTTCTGTATGGCGTC
AACAGGCCTGCCTGTTTGCCGCCGTACCACGATTGTCAGAAGGAGAGCCGGTGACGAGCGTGGCGCTGGATCTCGGATAT
GACAGCGTTTCCGCCTTCACGACAATGTTTCGCCGGATGCTGGGTGTGCCGCCGAAGTTTTATCAGCCGCGCCTCGACGT
GGCGCCGTTTGAACGCAGCGACAAAGCCGCGTTTGGTTAA

Upstream 100 bases:

>100_bases
ATTGATATCCGCCCGCTTTCGTGATTTGGTCCACTACTTGCGAGAGTGGGCCAAACTGGAGTCTTCCCCGATGAGATTTT
TGCCGCCGCCGGAGAGCTTG

Downstream 100 bases:

>100_bases
CGCAATAATAATAATTGTCTATGGAAACAGAGAACAGTATTAGAAGCGCATGTTGTTCCAACGCAGATATCCTCCGACAA
GATGGGAGCGCCTCAGGCTT

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MPENEDLQRFHEHRIAMLESMTGPAIALPTRYPDGYFVPRHSHSRAQLLCASQGVVLVTTDAGRWMIPSDHAMWIPAGVE
HSVAIFGDVFMRSIYISVDAISGVPNYLHVVGLTDLMRCLIIDATSHDSIPAPESRDGLVIELILRDLHTLPEYPLGLPF
PSDPRLQKLCRDFVKKPSSRATIDEWADRMAMSRRSFTRHFQRETGVSLSVWRQQACLFAAVPRLSEGEPVTSVALDLGY
DSVSAFTTMFRRMLGVPPKFYQPRLDVAPFERSDKAAFG

Sequences:

>Translated_279_residues
MPENEDLQRFHEHRIAMLESMTGPAIALPTRYPDGYFVPRHSHSRAQLLCASQGVVLVTTDAGRWMIPSDHAMWIPAGVE
HSVAIFGDVFMRSIYISVDAISGVPNYLHVVGLTDLMRCLIIDATSHDSIPAPESRDGLVIELILRDLHTLPEYPLGLPF
PSDPRLQKLCRDFVKKPSSRATIDEWADRMAMSRRSFTRHFQRETGVSLSVWRQQACLFAAVPRLSEGEPVTSVALDLGY
DSVSAFTTMFRRMLGVPPKFYQPRLDVAPFERSDKAAFG
>Mature_278_residues
PENEDLQRFHEHRIAMLESMTGPAIALPTRYPDGYFVPRHSHSRAQLLCASQGVVLVTTDAGRWMIPSDHAMWIPAGVEH
SVAIFGDVFMRSIYISVDAISGVPNYLHVVGLTDLMRCLIIDATSHDSIPAPESRDGLVIELILRDLHTLPEYPLGLPFP
SDPRLQKLCRDFVKKPSSRATIDEWADRMAMSRRSFTRHFQRETGVSLSVWRQQACLFAAVPRLSEGEPVTSVALDLGYD
SVSAFTTMFRRMLGVPPKFYQPRLDVAPFERSDKAAFG

Specific function: Unknown

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788091, Length=232, Percent_Identity=33.1896551724138, Blast_Score=130, Evalue=1e-31,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR003313
- InterPro:   IPR018062
- InterPro:   IPR018060
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02311 AraC_binding [H]

EC number: NA

Molecular weight: Translated: 31340; Mature: 31209

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPENEDLQRFHEHRIAMLESMTGPAIALPTRYPDGYFVPRHSHSRAQLLCASQGVVLVTT
CCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEECCCCCCCHHHEEEECCCEEEEEE
DAGRWMIPSDHAMWIPAGVEHSVAIFGDVFMRSIYISVDAISGVPNYLHVVGLTDLMRCL
CCCCEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHEEEHHCCCCHHHHHHHHHHHHHHH
IIDATSHDSIPAPESRDGLVIELILRDLHTLPEYPLGLPFPSDPRLQKLCRDFVKKPSSR
HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
ATIDEWADRMAMSRRSFTRHFQRETGVSLSVWRQQACLFAAVPRLSEGEPVTSVALDLGY
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHEECCCC
DSVSAFTTMFRRMLGVPPKFYQPRLDVAPFERSDKAAFG
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PENEDLQRFHEHRIAMLESMTGPAIALPTRYPDGYFVPRHSHSRAQLLCASQGVVLVTT
CCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEECCCCCCCHHHEEEECCCEEEEEE
DAGRWMIPSDHAMWIPAGVEHSVAIFGDVFMRSIYISVDAISGVPNYLHVVGLTDLMRCL
CCCCEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHEEEHHCCCCHHHHHHHHHHHHHHH
IIDATSHDSIPAPESRDGLVIELILRDLHTLPEYPLGLPFPSDPRLQKLCRDFVKKPSSR
HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
ATIDEWADRMAMSRRSFTRHFQRETGVSLSVWRQQACLFAAVPRLSEGEPVTSVALDLGY
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHEECCCC
DSVSAFTTMFRRMLGVPPKFYQPRLDVAPFERSDKAAFG
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]