| Definition | Brucella melitensis ATCC 23457 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_012441 |
| Length | 2,125,701 |
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The map label for this gene is ydiS [C]
Identifier: 225852146
GI number: 225852146
Start: 638621
End: 640312
Strand: Direct
Name: ydiS [C]
Synonym: BMEA_A0659
Alternate gene names: 225852146
Gene position: 638621-640312 (Clockwise)
Preceding gene: 225852143
Following gene: 225852149
Centisome position: 30.04
GC content: 59.22
Gene sequence:
>1692_bases ATGTCTGAAGCGAACGAGCTTCCCGAACGCGAGAGCATGGAATTCGACGTCGTGATTGTCGGCGCAGGCCCTGCCGGTCT TGCAGCGGCGATTCGTTTCAAACAGATAAACCCCGAACTTTCCGTGGTCGTGCTGGAAAAGGGTGGGGAAGTTGGCGCGC ATATCCTGTCGGGTGCGGTGGTGGACCCGGTCGGTATCGACCAGCTTCTGCCCGGCTGGCGCGAGGAGGAAGGCCATCCT TTCAAAACGCCTGTGACGGCGGACCATTTCCTGGTGCTGGGGCCTGCCGGTTCCGTGCGCCTGCCCAATTTTGCCATGCC GTCGCTGATGAACAACCACGGCAATTACATCGTTTCGCTCGGTAATGTCTGCCGCTGGCTCGGCACGAAGGCCGAGGAGC TGGGCGTGGAAATCTATCCGGGCTTCGCTGCGACCGAAGTACTCTATAATGACGAGGGCGCGGTGATCGGCGTTGCGACG GGCGACATGGGCGTCGAACGCGACGGCACACGTGGCCCTAACTATACGCGCGGCATGGCGCTGCTCGGTAAATATGTGCT GATCGGCGAGGGCGCGCGTGGTTCACTCGCCAAGCAGCTCATTGCGAAGTTCAAGCTTGACGAGGGCCGCGAACCGGCCA AGTTTGGCATCGGCCTGAAGGAGCTTTGGCAGGTTGATCCGTCGAAGCACAAACCGGGCCTCGTGCAGCATTCGTTCGGC TGGCCGCTGGACATGAAAACCGGCGGCGGCTCGTTCCTCTATCATCTTGAGGACAATATGGTTGCGGTGGGCTTTGTGCT GCACCTCAATTACAAGAACCCCTATCTCTCGCCATTCGAGGAATTCCAGCGTTTCAAGACGCATCCGGCCATCCGCGATA CGTTCGAGGGCGGCAAGCGCCTTTCCTATGGCGCGCGTGCAATTACCGAGGGCGGCTGGCAATCCGTGCCGAAGCTTTCC TTCCCCGGTGGCGCGCTCATCGGCTGCTCGGCCGGTTTTGTCAATGTGCCGCGCATCAAGGGCAGCCACAATGCGATCCT GTCCGGCATTCTGGCCGCCGACAAGATTGCAGAGGCGATTGCCGCTGGCCGTGCCAATGACGAGCCGATCGAGATCGAGA ATAGCTGGCGGGCGAGCGCCATTGGCAAGGACTTGAAGCGCGTGCGCAACGTCAAGCCGCTCTGGTCGAAGTTCGGCACC GCTATCGGCATTGCTCTGGGCGGCCTGGATATGTGGACCAACCAGCTTTTCGGCTTCTCGTTCTTCGGCACGATGAAGCA CGGCAAGACCGATGCGCAGGCGCTTGAACCGGCTGCAAACTACAAGAAGATCGACTATCCGAAGCCGGATGGTGTGCTGA CTTTTGACCGTCTGTCGTCTGTGTTCCTGTCGAACACGAACCACGACGAAAACGAGCCGGTGCATTTGCAAGTGCGTGAC ATGGAATTGCAGAAGACTTCGGAACACGATGTTTTCGCAGGACCGTCGACGCGCTATTGCCCGGCTGGTGTTTATGAATG GGTGGATGCGGACGGCAATGCCGCTGCTGATCCGGGCGTCAAGGATGTGCGTTTCGTCATCAATGCGCAGAACTGCGTCC ACTGCAAGACCTGCGACATCAAGGACCCAAACCAGAATATCAACTGGGTTCCGCCACAAGGCGGCGAAGGACCGGTCTAT ATGAACATGTAA
Upstream 100 bases:
>100_bases GTTCACTGGCGTTTGTGATAGGATCATGCGGAAAAACAATTGGATGCATCATTGGCGCTGGCATAGCGAGGAGATGATGG CATACCGGACGGAGGAATGA
Downstream 100 bases:
>100_bases TGTTCACATTTTAAGACCGTGTCCGTCTCGACCGCCGCTGGGAAGATGTCGGCGAAGGACCGGAACGAGAATTGTAATTT GACTGAATAAGGCGGCTTCT
Product: electron-transferring-flavoprotein dehydrogenase
Products: NA
Alternate protein names: ETF-QO; ETF-ubiquinone oxidoreductase; Electron-transferring-flavoprotein dehydrogenase; ETF dehydrogenase [H]
Number of amino acids: Translated: 563; Mature: 562
Protein sequence:
>563_residues MSEANELPERESMEFDVVIVGAGPAGLAAAIRFKQINPELSVVVLEKGGEVGAHILSGAVVDPVGIDQLLPGWREEEGHP FKTPVTADHFLVLGPAGSVRLPNFAMPSLMNNHGNYIVSLGNVCRWLGTKAEELGVEIYPGFAATEVLYNDEGAVIGVAT GDMGVERDGTRGPNYTRGMALLGKYVLIGEGARGSLAKQLIAKFKLDEGREPAKFGIGLKELWQVDPSKHKPGLVQHSFG WPLDMKTGGGSFLYHLEDNMVAVGFVLHLNYKNPYLSPFEEFQRFKTHPAIRDTFEGGKRLSYGARAITEGGWQSVPKLS FPGGALIGCSAGFVNVPRIKGSHNAILSGILAADKIAEAIAAGRANDEPIEIENSWRASAIGKDLKRVRNVKPLWSKFGT AIGIALGGLDMWTNQLFGFSFFGTMKHGKTDAQALEPAANYKKIDYPKPDGVLTFDRLSSVFLSNTNHDENEPVHLQVRD MELQKTSEHDVFAGPSTRYCPAGVYEWVDADGNAAADPGVKDVRFVINAQNCVHCKTCDIKDPNQNINWVPPQGGEGPVY MNM
Sequences:
>Translated_563_residues MSEANELPERESMEFDVVIVGAGPAGLAAAIRFKQINPELSVVVLEKGGEVGAHILSGAVVDPVGIDQLLPGWREEEGHP FKTPVTADHFLVLGPAGSVRLPNFAMPSLMNNHGNYIVSLGNVCRWLGTKAEELGVEIYPGFAATEVLYNDEGAVIGVAT GDMGVERDGTRGPNYTRGMALLGKYVLIGEGARGSLAKQLIAKFKLDEGREPAKFGIGLKELWQVDPSKHKPGLVQHSFG WPLDMKTGGGSFLYHLEDNMVAVGFVLHLNYKNPYLSPFEEFQRFKTHPAIRDTFEGGKRLSYGARAITEGGWQSVPKLS FPGGALIGCSAGFVNVPRIKGSHNAILSGILAADKIAEAIAAGRANDEPIEIENSWRASAIGKDLKRVRNVKPLWSKFGT AIGIALGGLDMWTNQLFGFSFFGTMKHGKTDAQALEPAANYKKIDYPKPDGVLTFDRLSSVFLSNTNHDENEPVHLQVRD MELQKTSEHDVFAGPSTRYCPAGVYEWVDADGNAAADPGVKDVRFVINAQNCVHCKTCDIKDPNQNINWVPPQGGEGPVY MNM >Mature_562_residues SEANELPERESMEFDVVIVGAGPAGLAAAIRFKQINPELSVVVLEKGGEVGAHILSGAVVDPVGIDQLLPGWREEEGHPF KTPVTADHFLVLGPAGSVRLPNFAMPSLMNNHGNYIVSLGNVCRWLGTKAEELGVEIYPGFAATEVLYNDEGAVIGVATG DMGVERDGTRGPNYTRGMALLGKYVLIGEGARGSLAKQLIAKFKLDEGREPAKFGIGLKELWQVDPSKHKPGLVQHSFGW PLDMKTGGGSFLYHLEDNMVAVGFVLHLNYKNPYLSPFEEFQRFKTHPAIRDTFEGGKRLSYGARAITEGGWQSVPKLSF PGGALIGCSAGFVNVPRIKGSHNAILSGILAADKIAEAIAAGRANDEPIEIENSWRASAIGKDLKRVRNVKPLWSKFGTA IGIALGGLDMWTNQLFGFSFFGTMKHGKTDAQALEPAANYKKIDYPKPDGVLTFDRLSSVFLSNTNHDENEPVHLQVRDM ELQKTSEHDVFAGPSTRYCPAGVYEWVDADGNAAADPGVKDVRFVINAQNCVHCKTCDIKDPNQNINWVPPQGGEGPVYM NM
Specific function: Accepts electrons from ETF and reduces ubiquinone [H]
COG id: COG0644
COG function: function code C; Dehydrogenases (flavoproteins)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI119703746, Length=568, Percent_Identity=50.3521126760563, Blast_Score=550, Evalue=1e-156, Organism=Escherichia coli, GI1787991, Length=329, Percent_Identity=27.355623100304, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1786227, Length=328, Percent_Identity=25.9146341463415, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI87082155, Length=290, Percent_Identity=27.9310344827586, Blast_Score=75, Evalue=8e-15, Organism=Caenorhabditis elegans, GI25144720, Length=572, Percent_Identity=48.2517482517483, Blast_Score=535, Evalue=1e-152, Organism=Saccharomyces cerevisiae, GI6324932, Length=576, Percent_Identity=43.4027777777778, Blast_Score=459, Evalue=1e-130, Organism=Drosophila melanogaster, GI24652256, Length=572, Percent_Identity=52.6223776223776, Blast_Score=574, Evalue=1e-164,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR007859 - InterPro: IPR003042 [H]
Pfam domain/function: PF05187 ETF_QO [H]
EC number: =1.5.5.1 [H]
Molecular weight: Translated: 61055; Mature: 60924
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEANELPERESMEFDVVIVGAGPAGLAAAIRFKQINPELSVVVLEKGGEVGAHILSGAV CCCCCCCCCCCCCEEEEEEECCCCHHHHHEEEEEECCCCEEEEEEECCCCCHHHHHCCCE VDPVGIDQLLPGWREEEGHPFKTPVTADHFLVLGPAGSVRLPNFAMPSLMNNHGNYIVSL ECCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCEECCCCCCHHHHCCCCCEEEEH GNVCRWLGTKAEELGVEIYPGFAATEVLYNDEGAVIGVATGDMGVERDGTRGPNYTRGMA HHHHHHHCCCHHHCCCEEECCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHH LLGKYVLIGEGARGSLAKQLIAKFKLDEGREPAKFGIGLKELWQVDPSKHKPGLVQHSFG HHCCEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHCCCCCCCCCCCEECCCC WPLDMKTGGGSFLYHLEDNMVAVGFVLHLNYKNPYLSPFEEFQRFKTHPAIRDTFEGGKR CCEEECCCCCEEEEEECCCEEEEEEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHCCCCE LSYGARAITEGGWQSVPKLSFPGGALIGCSAGFVNVPRIKGSHNAILSGILAADKIAEAI EECCCHHHCCCCCCCCCCCCCCCCEEEECCCCCEECCCCCCCHHHHHHHHHHHHHHHHHH AAGRANDEPIEIENSWRASAIGKDLKRVRNVKPLWSKFGTAIGIALGGLDMWTNQLFGFS HHCCCCCCCEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHCCEE FFGTMKHGKTDAQALEPAANYKKIDYPKPDGVLTFDRLSSVFLSNTNHDENEPVHLQVRD EEEECCCCCCHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCEEEEEEE MELQKTSEHDVFAGPSTRYCPAGVYEWVDADGNAAADPGVKDVRFVINAQNCVHCKTCDI EEECCCCCCCEECCCCCCCCCCCHHHEECCCCCCCCCCCCCEEEEEEECCCEEEEEECCC KDPNQNINWVPPQGGEGPVYMNM CCCCCCCCEECCCCCCCCEEECC >Mature Secondary Structure SEANELPERESMEFDVVIVGAGPAGLAAAIRFKQINPELSVVVLEKGGEVGAHILSGAV CCCCCCCCCCCCEEEEEEECCCCHHHHHEEEEEECCCCEEEEEEECCCCCHHHHHCCCE VDPVGIDQLLPGWREEEGHPFKTPVTADHFLVLGPAGSVRLPNFAMPSLMNNHGNYIVSL ECCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCEECCCCCCHHHHCCCCCEEEEH GNVCRWLGTKAEELGVEIYPGFAATEVLYNDEGAVIGVATGDMGVERDGTRGPNYTRGMA HHHHHHHCCCHHHCCCEEECCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHH LLGKYVLIGEGARGSLAKQLIAKFKLDEGREPAKFGIGLKELWQVDPSKHKPGLVQHSFG HHCCEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHCCCCCCCCCCCEECCCC WPLDMKTGGGSFLYHLEDNMVAVGFVLHLNYKNPYLSPFEEFQRFKTHPAIRDTFEGGKR CCEEECCCCCEEEEEECCCEEEEEEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHCCCCE LSYGARAITEGGWQSVPKLSFPGGALIGCSAGFVNVPRIKGSHNAILSGILAADKIAEAI EECCCHHHCCCCCCCCCCCCCCCCEEEECCCCCEECCCCCCCHHHHHHHHHHHHHHHHHH AAGRANDEPIEIENSWRASAIGKDLKRVRNVKPLWSKFGTAIGIALGGLDMWTNQLFGFS HHCCCCCCCEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHCCEE FFGTMKHGKTDAQALEPAANYKKIDYPKPDGVLTFDRLSSVFLSNTNHDENEPVHLQVRD EEEECCCCCCHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCEEEEEEE MELQKTSEHDVFAGPSTRYCPAGVYEWVDADGNAAADPGVKDVRFVINAQNCVHCKTCDI EEECCCCCCCEECCCCCCCCCCCHHHEECCCCCCCCCCCCCEEEEEEECCCEEEEEECCC KDPNQNINWVPPQGGEGPVYMNM CCCCCCCCEECCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]