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The map label for this gene is ccmH [H]

Identifier: 225852135

GI number: 225852135

Start: 619495

End: 619971

Strand: Direct

Name: ccmH [H]

Synonym: BMEA_A0648

Alternate gene names: 225852135

Gene position: 619495-619971 (Clockwise)

Preceding gene: 225852134

Following gene: 225852136

Centisome position: 29.14

GC content: 55.56

Gene sequence:

>477_bases
ATGAAAAAGAATAATCTTTTCCGGGCCCTGCTTATCAGCGCAACATTCGCCTTGCAGGCCACGGCGGCATTTGCCGTCAA
CCCCGACGAAGTGCTTTCCGATCCGAAGCTTGAAAAGCGTGCCCGTGAAATTTCCGCCGAGCTGCGCTGTATGGTCTGCC
AGAACGAATCTATCGATGATTCCAATGCGGAGCTTGCGCGCGATCTGCGCATTCTGGTGCGTGAACGCCTGACAAAAGGC
GATACGGACGGGCAGGTGATTGATTTCGTCGTTGATCGCTATGGCGAATTCGTTCTTCTCAAACCCCGTTTCAACGCGCA
GACGGCGCTGCTTTGGGGCTTTCCTGTTATTATTCTCCTGATTGGCGGCGGCGCGCTTCTTGTTGCTTTCCGGCGTCGGC
GCGCTGCTGTCACAGCCCCACAGCCCCTTTCCGAAAGCGAAAAAGCGGAACTTTCCCGCCTGCTCGACGGAAAATAG

Upstream 100 bases:

>100_bases
TGATGCTGGGTGGCTTGTTCTCGCTGGCCGACCGCCGCCTCAGGGTTGGTGCGCCTTCCAAGGTGCGCAGGTCCGCCTCG
AAGGAAGCGGAAGCCGTCGC

Downstream 100 bases:

>100_bases
GCCAACAAAACCTCTGGAAACCTTACGAAACTTTCATCTTGCGGAAATTGAACGGTAAGGTAGCTCTAACTATCTTGCTC
TCATAGAAAATTACGAGGCC

Product: cytochrome c-type biogenesis protein ccl2 precursor

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CycL [H]

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MKKNNLFRALLISATFALQATAAFAVNPDEVLSDPKLEKRAREISAELRCMVCQNESIDDSNAELARDLRILVRERLTKG
DTDGQVIDFVVDRYGEFVLLKPRFNAQTALLWGFPVIILLIGGGALLVAFRRRRAAVTAPQPLSESEKAELSRLLDGK

Sequences:

>Translated_158_residues
MKKNNLFRALLISATFALQATAAFAVNPDEVLSDPKLEKRAREISAELRCMVCQNESIDDSNAELARDLRILVRERLTKG
DTDGQVIDFVVDRYGEFVLLKPRFNAQTALLWGFPVIILLIGGGALLVAFRRRRAAVTAPQPLSESEKAELSRLLDGK
>Mature_158_residues
MKKNNLFRALLISATFALQATAAFAVNPDEVLSDPKLEKRAREISAELRCMVCQNESIDDSNAELARDLRILVRERLTKG
DTDGQVIDFVVDRYGEFVLLKPRFNAQTALLWGFPVIILLIGGGALLVAFRRRRAAVTAPQPLSESEKAELSRLLDGK

Specific function: Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase [H]

COG id: COG3088

COG function: function code O; Uncharacterized protein involved in biosynthesis of c-type cytochromes

Gene ontology:

Cell location: Membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmH/CycL/Ccl2/NrfF family [H]

Homologues:

Organism=Escherichia coli, GI1788522, Length=90, Percent_Identity=43.3333333333333, Blast_Score=85, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005616 [H]

Pfam domain/function: PF03918 CcmH [H]

EC number: NA

Molecular weight: Translated: 17570; Mature: 17570

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNNLFRALLISATFALQATAAFAVNPDEVLSDPKLEKRAREISAELRCMVCQNESIDD
CCCCHHHHHHHHHHHHHHHHHHEEECCHHHHHCCCHHHHHHHHHHHHHEEEEECCCCCCC
SNAELARDLRILVRERLTKGDTDGQVIDFVVDRYGEFVLLKPRFNAQTALLWGFPVIILL
CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHH
IGGGALLVAFRRRRAAVTAPQPLSESEKAELSRLLDGK
HCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKKNNLFRALLISATFALQATAAFAVNPDEVLSDPKLEKRAREISAELRCMVCQNESIDD
CCCCHHHHHHHHHHHHHHHHHHEEECCHHHHHCCCHHHHHHHHHHHHHEEEEECCCCCCC
SNAELARDLRILVRERLTKGDTDGQVIDFVVDRYGEFVLLKPRFNAQTALLWGFPVIILL
CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHH
IGGGALLVAFRRRRAAVTAPQPLSESEKAELSRLLDGK
HCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7715602; 11481430 [H]