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The map label for this gene is ycjS [C]

Identifier: 225852078

GI number: 225852078

Start: 560393

End: 561565

Strand: Direct

Name: ycjS [C]

Synonym: BMEA_A0584

Alternate gene names: 225852078

Gene position: 560393-561565 (Clockwise)

Preceding gene: 225852077

Following gene: 225852084

Centisome position: 26.36

GC content: 59.76

Gene sequence:

>1173_bases
ATGACGATTGAAGCCAAAATCAAGGAAACATCCGCATCCCGCATCCGCCTCGGCATGGTGGGCGGCGGGGCAGGGGCTTT
CATCGGCGGTGTACACCGCATGGCGGCGCGGCTTGATAACCGTTTCGATCTGGTGGCCGGCGCGCTGTCTTCCTCGCCGG
AAAGGGCGCAGGCTTCCGGTCGCGAGCTGGGGCTGGCCGAAGACCGCATTTATTCCAGCTACAAGGACATGGCCATTCGT
GAAGCGCGGCTGAAAAACGGTATCGAGGCCGTTTCCATCGTAACGCCAAACCACGTTCATTATGACGCCGCCAAGGAGTT
TCTGCGGCGTGGCATCCATGTCATCTGCGACAAGCCGCTGACCTCGACCCTTGCCGATGCGAAGAAGTTGAAGAAGGTGG
CAGATGAAAGCGGCGCGCTGTTCATCCTGACGCATAATTACACCGGCTATCCCATGGTGCGGCAGGCGCGCGAAATGATT
GCCAATGGCGACCTTGGCGATCTTCGTGTCGTACAGGTGGAATATGCGCAGGACTGGCTCACCGAAGCGGTTGAAGCGAC
CGGCGCGAAAGGGGCTGTCTGGCGCACCGATCCGGTGCAATCGGGACTGGGCGGCGCAACCGGCGATATCGGTACCCACG
CCTTTAATCTCGCCTCTTTTGTGACCGGCCTCACGCTCGATAGTCTTGCCGCCGATCTAGACAGTTTTGTCGAGGGACGC
CGCCTGGACGACAATGCCCATGTGATGCTGCGTTTTGAAGGCGGCGCGAAGGGAATGCTCTGGTGCAGCCAGGTTGCGCC
CGGCAATGAAAATGCGCTGCGTCTGCGCGTCTATGGCACAAAGGGTGGCATTGAATGGGCGCAGGAGGATCCGAACCGGC
TGTGGTTCACGCCTTTTGGTGAGCAGAAGCGGCTCATCACGCGGGGCGGTGCCGGCGTTGGCCCGGCCGCAACGCGCGTG
ACCCGCGTACCGGCAGGACACCCGGAAGGCTATCTGGAGGCTTTTGCCACAATCTATTCGGAAGCAGCCAATGCCATTGA
GGCTCATCGCAACGGCAAAAAACCGGACCGTGCGGTGGTCTATCCAACTGTCGAGGATGGTTTGAAGGGCGTTGCTTTCA
TTGATGCCTGCGTGCGCTCGTCACGGAAAAATGGTGGTTGGGTTAAGCTTTAA

Upstream 100 bases:

>100_bases
GCGCATATCATCCGCGTGACTGACAAAGCGTTCGATGATTTCGCCTCCGGCGGCACGGATGAAGCTGCCAACAGACGTAT
GCTGGGACTATGAGGACGCC

Downstream 100 bases:

>100_bases
AGCGAAAGGGCACCGCTGGCGCCCTTTCTGTTTCGTGGGGTTCAAACGTAGCGATTGACGATGTTTTCCAGATATTCCTG
ACGGCCGGATTTCGGCTGCG

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MTIEAKIKETSASRIRLGMVGGGAGAFIGGVHRMAARLDNRFDLVAGALSSSPERAQASGRELGLAEDRIYSSYKDMAIR
EARLKNGIEAVSIVTPNHVHYDAAKEFLRRGIHVICDKPLTSTLADAKKLKKVADESGALFILTHNYTGYPMVRQAREMI
ANGDLGDLRVVQVEYAQDWLTEAVEATGAKGAVWRTDPVQSGLGGATGDIGTHAFNLASFVTGLTLDSLAADLDSFVEGR
RLDDNAHVMLRFEGGAKGMLWCSQVAPGNENALRLRVYGTKGGIEWAQEDPNRLWFTPFGEQKRLITRGGAGVGPAATRV
TRVPAGHPEGYLEAFATIYSEAANAIEAHRNGKKPDRAVVYPTVEDGLKGVAFIDACVRSSRKNGGWVKL

Sequences:

>Translated_390_residues
MTIEAKIKETSASRIRLGMVGGGAGAFIGGVHRMAARLDNRFDLVAGALSSSPERAQASGRELGLAEDRIYSSYKDMAIR
EARLKNGIEAVSIVTPNHVHYDAAKEFLRRGIHVICDKPLTSTLADAKKLKKVADESGALFILTHNYTGYPMVRQAREMI
ANGDLGDLRVVQVEYAQDWLTEAVEATGAKGAVWRTDPVQSGLGGATGDIGTHAFNLASFVTGLTLDSLAADLDSFVEGR
RLDDNAHVMLRFEGGAKGMLWCSQVAPGNENALRLRVYGTKGGIEWAQEDPNRLWFTPFGEQKRLITRGGAGVGPAATRV
TRVPAGHPEGYLEAFATIYSEAANAIEAHRNGKKPDRAVVYPTVEDGLKGVAFIDACVRSSRKNGGWVKL
>Mature_389_residues
TIEAKIKETSASRIRLGMVGGGAGAFIGGVHRMAARLDNRFDLVAGALSSSPERAQASGRELGLAEDRIYSSYKDMAIRE
ARLKNGIEAVSIVTPNHVHYDAAKEFLRRGIHVICDKPLTSTLADAKKLKKVADESGALFILTHNYTGYPMVRQAREMIA
NGDLGDLRVVQVEYAQDWLTEAVEATGAKGAVWRTDPVQSGLGGATGDIGTHAFNLASFVTGLTLDSLAADLDSFVEGRR
LDDNAHVMLRFEGGAKGMLWCSQVAPGNENALRLRVYGTKGGIEWAQEDPNRLWFTPFGEQKRLITRGGAGVGPAATRVT
RVPAGHPEGYLEAFATIYSEAANAIEAHRNGKKPDRAVVYPTVEDGLKGVAFIDACVRSSRKNGGWVKL

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 42024; Mature: 41893

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIEAKIKETSASRIRLGMVGGGAGAFIGGVHRMAARLDNRFDLVAGALSSSPERAQASG
CCEECEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHCC
RELGLAEDRIYSSYKDMAIREARLKNGIEAVSIVTPNHVHYDAAKEFLRRGIHVICDKPL
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEHHHHHHHHHCCCEEEECCCH
TSTLADAKKLKKVADESGALFILTHNYTGYPMVRQAREMIANGDLGDLRVVQVEYAQDWL
HHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHH
TEAVEATGAKGAVWRTDPVQSGLGGATGDIGTHAFNLASFVTGLTLDSLAADLDSFVEGR
HHHHHHCCCCCCEEECCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RLDDNAHVMLRFEGGAKGMLWCSQVAPGNENALRLRVYGTKGGIEWAQEDPNRLWFTPFG
CCCCCCEEEEEECCCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCC
EQKRLITRGGAGVGPAATRVTRVPAGHPEGYLEAFATIYSEAANAIEAHRNGKKPDRAVV
CCCCEEECCCCCCCCHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
YPTVEDGLKGVAFIDACVRSSRKNGGWVKL
ECCHHHCCCHHHHHHHHHHCCCCCCCEEEC
>Mature Secondary Structure 
TIEAKIKETSASRIRLGMVGGGAGAFIGGVHRMAARLDNRFDLVAGALSSSPERAQASG
CEECEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHCC
RELGLAEDRIYSSYKDMAIREARLKNGIEAVSIVTPNHVHYDAAKEFLRRGIHVICDKPL
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEHHHHHHHHHCCCEEEECCCH
TSTLADAKKLKKVADESGALFILTHNYTGYPMVRQAREMIANGDLGDLRVVQVEYAQDWL
HHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHH
TEAVEATGAKGAVWRTDPVQSGLGGATGDIGTHAFNLASFVTGLTLDSLAADLDSFVEGR
HHHHHHCCCCCCEEECCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RLDDNAHVMLRFEGGAKGMLWCSQVAPGNENALRLRVYGTKGGIEWAQEDPNRLWFTPFG
CCCCCCEEEEEECCCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCC
EQKRLITRGGAGVGPAATRVTRVPAGHPEGYLEAFATIYSEAANAIEAHRNGKKPDRAVV
CCCCEEECCCCCCCCHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
YPTVEDGLKGVAFIDACVRSSRKNGGWVKL
ECCHHHCCCHHHHHHHHHHCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]