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The map label for this gene is yiaN [C]

Identifier: 225851888

GI number: 225851888

Start: 373448

End: 375016

Strand: Direct

Name: yiaN [C]

Synonym: BMEA_A0381

Alternate gene names: 225851888

Gene position: 373448-375016 (Clockwise)

Preceding gene: 225851887

Following gene: 225851889

Centisome position: 17.57

GC content: 59.53

Gene sequence:

>1569_bases
ATGGTTGCTTTTTTTGCGGAAAATCTCGCACCCCTGATGTTCCTGTCGCTGGTGGTCGTGCTGCTGCTCGGCTATCCCGT
GGCTTTCGCGCTTGCTTTCGTGGGCTTTGCCTTCGGTTTCATCGGTATTGAATTGGGTCTTCTGCCCGTCAATCTGTTTG
GCGCGATCCCCGACCGAATTTTCGGCCAGATGTCGAACGAGACATTGCTCGCCATTCCCTTCTTTACCTTCATGGGGCTC
ATCCTTGAGCGAAGCGGCATGGCGGAAGATCTGCTTGATACGATCGGGCAATTGTTCGGCCCCGTTCGCGGCGGCCTTGC
CTATGCGGTCATCATCGTCGGCGCGCTTCTGGCGGCAACGACAGGCGTTGTCGCGGCCTCAGTGATATCCATGGGGCTGA
TCTCGCTGCCGATCATGTTGCGCTATGGCTATGACCGCAAGGTTGCAAGCGGCACGATTGCCGCCGCCGGCACACTGGCG
CAGATCATTCCGCCAAGCCTCGTGCTCATCGTTCTGGCCGACCAGCTTGGCCGCTCCGTGGGCGATATGTACAAGGGCGC
GCTCGTTCCGGGCCTGCTTCTTGTCGGGGTCTATGTCGGTTTCATCGTCGTCATGTCGATCCTGCGGCCGAATTCGGTTC
CGGCCCTGCCGTTGCAGGCACGCACCCTGAAAGGCTGGAAGCTTGCCCGGCGCGTGGTGCTTTCGCTGGTGCCGCCGCTG
GTTCTGATCTTTCTTGTGCTCGGCACGATTTTCATTGGTGTTGCCACGCCGACGGAAGGCGGTGCGATGGGCGCGGTCGG
CGCGCTGCTGCTTGCCATCATCAACGGTCGCCTCAACCTGAAAATGCTGACCTCGGCGCTTTATGCGACCACGAAGCTCT
CATCCTTCGTGATCTTCATCCTGCTTGGTGCGCGCGTCTTCTCGCTCACCTTCTATGGCGTCAACGGCCATGTGTGGGTT
GAGCACCTGATGACATCGGTTCCCGGCGGTGAAGTGGGCTTCCTGATCGTCGCCAATATTCTGGTGTTCTTTCTGGCCTT
CTTCCTCGATTATTTCGAGCTGGCCTTCATCATCATTCCGCTGCTGGCGCCGGTTGCCGACAGCCTCGGCATCGATCTCA
TCTGGTTTGGCGTGATGCTGGCCATGAACATGCAGACCTCGTTCATGCATCCGCCCTTCGGCTTCTCGCTCTTCTATCTG
CGGTCCGTGGCACCCTCGCGCCCCTATAAGGACAAGGTAACAGGCGCGACCATCCCGCCGGTCACATCGGGACAAATCTA
TATGGGCTCGATCCCGTTCCTGCTGATTCAGGTAGTGGCGGTTGGCGTCATCATCGCATTCCCGGGCCTTGTCACACATT
ACAAGGGCAATCATCCGCAGGTCGATCCGGCTTCGATCCAGATCAATGTGCCGATGCCCGATGCGGGCGGCGGCAATCCG
TTTGGCAATGCTCCGGCCCCATTCGGCGCGCCTTCGCCTGCCGTCGAGCCACTGCCCGCCCCATCCTTCGGTTCTCCTGC
GCCAAGCTTCGGGCAGGGTGCTGATCAAAAGGAAAAGCCTGCGCAATGA

Upstream 100 bases:

>100_bases
TATCCGAACTCATCAAGCGCATTGCCATTCTTCAAGGGCGCATACCGGATACGGTTGCCATTGAAGATGCGGAAGCCCAG
GCGCTCTGAGGGGAATGGAT

Downstream 100 bases:

>100_bases
GTGGGGACATCAAACATTGCGCAAGCTTAATGAAAAACAACATATATTGAGGAGGAGAGACATGAAAGAAACCTTGAGCC
GCCGCAGCTTCCTGACCAAA

Product: TRAP transporter subunit DctM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 522; Mature: 522

Protein sequence:

>522_residues
MVAFFAENLAPLMFLSLVVVLLLGYPVAFALAFVGFAFGFIGIELGLLPVNLFGAIPDRIFGQMSNETLLAIPFFTFMGL
ILERSGMAEDLLDTIGQLFGPVRGGLAYAVIIVGALLAATTGVVAASVISMGLISLPIMLRYGYDRKVASGTIAAAGTLA
QIIPPSLVLIVLADQLGRSVGDMYKGALVPGLLLVGVYVGFIVVMSILRPNSVPALPLQARTLKGWKLARRVVLSLVPPL
VLIFLVLGTIFIGVATPTEGGAMGAVGALLLAIINGRLNLKMLTSALYATTKLSSFVIFILLGARVFSLTFYGVNGHVWV
EHLMTSVPGGEVGFLIVANILVFFLAFFLDYFELAFIIIPLLAPVADSLGIDLIWFGVMLAMNMQTSFMHPPFGFSLFYL
RSVAPSRPYKDKVTGATIPPVTSGQIYMGSIPFLLIQVVAVGVIIAFPGLVTHYKGNHPQVDPASIQINVPMPDAGGGNP
FGNAPAPFGAPSPAVEPLPAPSFGSPAPSFGQGADQKEKPAQ

Sequences:

>Translated_522_residues
MVAFFAENLAPLMFLSLVVVLLLGYPVAFALAFVGFAFGFIGIELGLLPVNLFGAIPDRIFGQMSNETLLAIPFFTFMGL
ILERSGMAEDLLDTIGQLFGPVRGGLAYAVIIVGALLAATTGVVAASVISMGLISLPIMLRYGYDRKVASGTIAAAGTLA
QIIPPSLVLIVLADQLGRSVGDMYKGALVPGLLLVGVYVGFIVVMSILRPNSVPALPLQARTLKGWKLARRVVLSLVPPL
VLIFLVLGTIFIGVATPTEGGAMGAVGALLLAIINGRLNLKMLTSALYATTKLSSFVIFILLGARVFSLTFYGVNGHVWV
EHLMTSVPGGEVGFLIVANILVFFLAFFLDYFELAFIIIPLLAPVADSLGIDLIWFGVMLAMNMQTSFMHPPFGFSLFYL
RSVAPSRPYKDKVTGATIPPVTSGQIYMGSIPFLLIQVVAVGVIIAFPGLVTHYKGNHPQVDPASIQINVPMPDAGGGNP
FGNAPAPFGAPSPAVEPLPAPSFGSPAPSFGQGADQKEKPAQ
>Mature_522_residues
MVAFFAENLAPLMFLSLVVVLLLGYPVAFALAFVGFAFGFIGIELGLLPVNLFGAIPDRIFGQMSNETLLAIPFFTFMGL
ILERSGMAEDLLDTIGQLFGPVRGGLAYAVIIVGALLAATTGVVAASVISMGLISLPIMLRYGYDRKVASGTIAAAGTLA
QIIPPSLVLIVLADQLGRSVGDMYKGALVPGLLLVGVYVGFIVVMSILRPNSVPALPLQARTLKGWKLARRVVLSLVPPL
VLIFLVLGTIFIGVATPTEGGAMGAVGALLLAIINGRLNLKMLTSALYATTKLSSFVIFILLGARVFSLTFYGVNGHVWV
EHLMTSVPGGEVGFLIVANILVFFLAFFLDYFELAFIIIPLLAPVADSLGIDLIWFGVMLAMNMQTSFMHPPFGFSLFYL
RSVAPSRPYKDKVTGATIPPVTSGQIYMGSIPFLLIQVVAVGVIIAFPGLVTHYKGNHPQVDPASIQINVPMPDAGGGNP
FGNAPAPFGAPSPAVEPLPAPSFGSPAPSFGQGADQKEKPAQ

Specific function: Unknown

COG id: COG4664

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=396, Percent_Identity=27.020202020202, Blast_Score=95, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 55021; Mature: 55021

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure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CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]