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The map label for this gene is agmR [H]

Identifier: 225851861

GI number: 225851861

Start: 347400

End: 348041

Strand: Direct

Name: agmR [H]

Synonym: BMEA_A0353

Alternate gene names: 225851861

Gene position: 347400-348041 (Clockwise)

Preceding gene: 225851859

Following gene: 225851864

Centisome position: 16.34

GC content: 58.41

Gene sequence:

>642_bases
ATGCATTTCATTATCGCTGATGACCACCCGCTGTTTCGCGGTGCTTTGCGGCAGGTTCTTTCGGGCCAGTCTGAAAATGT
GGAGATTATCGAGGCAGGCGATTTCGATACGGTCAGGAAACTGGTCGGTGAGAAGGACGATACCGATCTCCTGCTTCTGG
ACCTCACCATGCCGGGCGGTACGGGACTTTCCGGACTTGTCGCGCTGAAGGCGCTGCAACCGGCCCTGCCGATCATCATT
GTTTCGGCGACGGATGATCCGGCCACGATCCATCACGCACTGGAACTTGGGGCTTCCGGTTTCATCTCCAAATCGGCCAG
CATGGAAACCATCGGCGAAGCCGTGGGTGCGGTGCTTGCCGGCGATATATGGACGCCGGACGATATCGACCTCGACCACC
CGAAAGACCCGGAAATCGAATCGCTCATTGCGCGGCTGCGCACCCTGACGCCGCAGCAAACCCGCGTTCTGACCATGCTT
GCCGAGGGGCTTCTCAACAAACAGATCGCTTTTGAGCTTGGCGTTTCGGAGGCAACGGTCAAGGCGCATGTTTCCGCCGT
GCTGCAAAAGCTTGGCGTCGATAGCCGCACACAGGCCGTCATTCTCCTTTCGCGTATCGGCAGCGACGTTCTGGGCGTTT
GA

Upstream 100 bases:

>100_bases
TTTGGTTGCTCCATTTTAAAATAGGCCTAAAAACTAGGCCGGTCTGCAAGCAGACTGGGCACCGCACGGGGAGGACCTTC
AAAAATGGCGCGCGAGGCAA

Downstream 100 bases:

>100_bases
GCCAGCTCAGCTATAGGAGCTGTCGGCCTTTGCCGCTTATCGTGTACTGCCTTGCGTCGATGCCCCGTCCTGGCGTGCGT
GATGAAAAAGCGAGAGCATC

Product: LuxR family two component transcriptional regulator

Products: NA

Alternate protein names: Protein AgmR [H]

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MHFIIADDHPLFRGALRQVLSGQSENVEIIEAGDFDTVRKLVGEKDDTDLLLLDLTMPGGTGLSGLVALKALQPALPIII
VSATDDPATIHHALELGASGFISKSASMETIGEAVGAVLAGDIWTPDDIDLDHPKDPEIESLIARLRTLTPQQTRVLTML
AEGLLNKQIAFELGVSEATVKAHVSAVLQKLGVDSRTQAVILLSRIGSDVLGV

Sequences:

>Translated_213_residues
MHFIIADDHPLFRGALRQVLSGQSENVEIIEAGDFDTVRKLVGEKDDTDLLLLDLTMPGGTGLSGLVALKALQPALPIII
VSATDDPATIHHALELGASGFISKSASMETIGEAVGAVLAGDIWTPDDIDLDHPKDPEIESLIARLRTLTPQQTRVLTML
AEGLLNKQIAFELGVSEATVKAHVSAVLQKLGVDSRTQAVILLSRIGSDVLGV
>Mature_213_residues
MHFIIADDHPLFRGALRQVLSGQSENVEIIEAGDFDTVRKLVGEKDDTDLLLLDLTMPGGTGLSGLVALKALQPALPIII
VSATDDPATIHHALELGASGFISKSASMETIGEAVGAVLAGDIWTPDDIDLDHPKDPEIESLIARLRTLTPQQTRVLTML
AEGLLNKQIAFELGVSEATVKAHVSAVLQKLGVDSRTQAVILLSRIGSDVLGV

Specific function: Positive activator for glycerol metabolism [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=211, Percent_Identity=34.1232227488152, Blast_Score=96, Evalue=1e-21,
Organism=Escherichia coli, GI1786747, Length=192, Percent_Identity=28.6458333333333, Blast_Score=91, Evalue=4e-20,
Organism=Escherichia coli, GI1788546, Length=218, Percent_Identity=28.4403669724771, Blast_Score=85, Evalue=3e-18,
Organism=Escherichia coli, GI1788712, Length=200, Percent_Identity=30.5, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1790102, Length=191, Percent_Identity=30.8900523560209, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1789937, Length=131, Percent_Identity=29.0076335877863, Blast_Score=67, Evalue=7e-13,
Organism=Escherichia coli, GI1787473, Length=210, Percent_Identity=30.4761904761905, Blast_Score=64, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 22582; Mature: 22582

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFIIADDHPLFRGALRQVLSGQSENVEIIEAGDFDTVRKLVGEKDDTDLLLLDLTMPGG
CEEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHCCCCCCCEEEEEEECCCC
TGLSGLVALKALQPALPIIIVSATDDPATIHHALELGASGFISKSASMETIGEAVGAVLA
CCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHH
GDIWTPDDIDLDHPKDPEIESLIARLRTLTPQQTRVLTMLAEGLLNKQIAFELGVSEATV
CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHEEECCCHHHH
KAHVSAVLQKLGVDSRTQAVILLSRIGSDVLGV
HHHHHHHHHHHCCCCCHHHHHHHHHHCHHHCCC
>Mature Secondary Structure
MHFIIADDHPLFRGALRQVLSGQSENVEIIEAGDFDTVRKLVGEKDDTDLLLLDLTMPGG
CEEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHCCCCCCCEEEEEEECCCC
TGLSGLVALKALQPALPIIIVSATDDPATIHHALELGASGFISKSASMETIGEAVGAVLA
CCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHH
GDIWTPDDIDLDHPKDPEIESLIARLRTLTPQQTRVLTMLAEGLLNKQIAFELGVSEATV
CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHEEECCCHHHH
KAHVSAVLQKLGVDSRTQAVILLSRIGSDVLGV
HHHHHHHHHHHCCCCCHHHHHHHHHHCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1938886; 10984043 [H]