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The map label for this gene is bepD [H]

Identifier: 225851838

GI number: 225851838

Start: 322094

End: 323287

Strand: Direct

Name: bepD [H]

Synonym: BMEA_A0327

Alternate gene names: 225851838

Gene position: 322094-323287 (Clockwise)

Preceding gene: 225851834

Following gene: 225851839

Centisome position: 15.15

GC content: 59.88

Gene sequence:

>1194_bases
ATGACTTTGAACCGTACCATCCGGTGTTTTGCGGCAGGGGCCGCTTTTATTGTTTTTGCGGCGCAGCCCGCCCTGGCACA
GGCGCCTGGTGGCGCCACGCCACCGCCGCCGCAGGTTTTCGTCGTTGATATCAAGCCGCATGACGTGCCTGTGACCTATG
AATATGCCGCACGTATCAGCGCATATAGAAATGTCCAGGTGCGCGCCCGCGTCGGCGGTATTCTGCTGCACCGCAATTTC
GTTGAGGGCACGCAGGTCAAGGCAGGCGAGGTCCTGTTCGAGATCGATCCGGCGCCTTATCAGGCGGAGCTTGAAAAGGC
GCAGGCGCAAGTCGCACAGGCCGAGGCGCAGTACCAGCAGTCGATCCGCGACGCTGAACGCGCCGAACAGCTTGTGCAGC
AAAAGGTGCAGAGCGCGGCGGTGCGCGATTCCGCTTTTGCAACGCGCGATCTCAACAAGGCTGCCGTTGCCGCGGCCAAG
GCGCAGTTGCGTACGGCTGAACTGAACCTGAGCTATACCAAGGTGACAGCGCCGATCAGCGGCATCACCAGCCAGGAACA
GGTGAATGAAGGCAGCCTTATCGGTACGGATGCCTCTTCGAGCCTTCTCACTTCGGTCACGCAGCTCGACCCGGTCTATG
TGAATTTCTCCTTCACCGATACGGAAGCAGCGGAAATCGCCAAGCTTCGCGCCGAACGCGGCGCGACGGGCGAGGATGCC
GACCGGCTGAAAATCAAGATCCTTTTCGGCGACGGTAAGGCCTACGACCATGAAGGCACCATCGACTTCACCTCGTCCTC
GCTTGATACGGAAACCGGCACACTCGGCGTTCGCGCCGTCGTGGAAAACCCCAATCACCGGCTTATTCCCGGCCAGTTCG
TGCGTGCTGAAATCCTCGATATTCAGGTGAAGGATGCCATCACCGTGCCCAAGGCCGCCCTCATGCAGAGCGCGCAGGGG
CAGTTCGTCTATGTGGTCAACAAGGACAATGTCGTTGAAGTGCGCCCGGTCACAGGCGCCCGTGAGTTGAAAAACGACTG
GCTGATCTCGCAGGGTCTCAATTCCGGTGATCGTGTCATTACCGAAGGCGTCATCAAGGCAGTGCCGGGCCGTCCGGTCC
AGCCAGTAGTGCAGGGCGTGGATGACAAGGCGCAAGCTGAGGCTGGAAAAGAACAGGCGGCAGACAAGAAATGA

Upstream 100 bases:

>100_bases
TGGCATTAAGCAATTGACTATAGCACCCTAATTCGTATTTACAAACACACGTGTATGTTTATCTGGTCGCTATGCGCGAC
AGTAAGGGCGAATTCCCACC

Downstream 100 bases:

>100_bases
ACAGGTTCTTTGTCGATCGCCCGGTTTTCGCGGCGGTCATATCCATCGTTCTCGTGCTGGCTGGCCTCATCTGCATCCGC
ATTCTGCCAGTTGCCCAATA

Product: RND family efflux transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MTLNRTIRCFAAGAAFIVFAAQPALAQAPGGATPPPPQVFVVDIKPHDVPVTYEYAARISAYRNVQVRARVGGILLHRNF
VEGTQVKAGEVLFEIDPAPYQAELEKAQAQVAQAEAQYQQSIRDAERAEQLVQQKVQSAAVRDSAFATRDLNKAAVAAAK
AQLRTAELNLSYTKVTAPISGITSQEQVNEGSLIGTDASSSLLTSVTQLDPVYVNFSFTDTEAAEIAKLRAERGATGEDA
DRLKIKILFGDGKAYDHEGTIDFTSSSLDTETGTLGVRAVVENPNHRLIPGQFVRAEILDIQVKDAITVPKAALMQSAQG
QFVYVVNKDNVVEVRPVTGARELKNDWLISQGLNSGDRVITEGVIKAVPGRPVQPVVQGVDDKAQAEAGKEQAADKK

Sequences:

>Translated_397_residues
MTLNRTIRCFAAGAAFIVFAAQPALAQAPGGATPPPPQVFVVDIKPHDVPVTYEYAARISAYRNVQVRARVGGILLHRNF
VEGTQVKAGEVLFEIDPAPYQAELEKAQAQVAQAEAQYQQSIRDAERAEQLVQQKVQSAAVRDSAFATRDLNKAAVAAAK
AQLRTAELNLSYTKVTAPISGITSQEQVNEGSLIGTDASSSLLTSVTQLDPVYVNFSFTDTEAAEIAKLRAERGATGEDA
DRLKIKILFGDGKAYDHEGTIDFTSSSLDTETGTLGVRAVVENPNHRLIPGQFVRAEILDIQVKDAITVPKAALMQSAQG
QFVYVVNKDNVVEVRPVTGARELKNDWLISQGLNSGDRVITEGVIKAVPGRPVQPVVQGVDDKAQAEAGKEQAADKK
>Mature_396_residues
TLNRTIRCFAAGAAFIVFAAQPALAQAPGGATPPPPQVFVVDIKPHDVPVTYEYAARISAYRNVQVRARVGGILLHRNFV
EGTQVKAGEVLFEIDPAPYQAELEKAQAQVAQAEAQYQQSIRDAERAEQLVQQKVQSAAVRDSAFATRDLNKAAVAAAKA
QLRTAELNLSYTKVTAPISGITSQEQVNEGSLIGTDASSSLLTSVTQLDPVYVNFSFTDTEAAEIAKLRAERGATGEDAD
RLKIKILFGDGKAYDHEGTIDFTSSSLDTETGTLGVRAVVENPNHRLIPGQFVRAEILDIQVKDAITVPKAALMQSAQGQ
FVYVVNKDNVVEVRPVTGARELKNDWLISQGLNSGDRVITEGVIKAVPGRPVQPVVQGVDDKAQAEAGKEQAADKK

Specific function: Involved in resistance to several unrelated toxic compounds, such as dyes, detergents and antibiotics [H]

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI1789665, Length=339, Percent_Identity=39.2330383480826, Blast_Score=215, Evalue=3e-57,
Organism=Escherichia coli, GI1786668, Length=358, Percent_Identity=36.0335195530726, Blast_Score=208, Evalue=5e-55,
Organism=Escherichia coli, GI1789929, Length=337, Percent_Identity=32.0474777448071, Blast_Score=193, Evalue=2e-50,
Organism=Escherichia coli, GI87082036, Length=329, Percent_Identity=31.6109422492401, Blast_Score=154, Evalue=8e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 42645; Mature: 42514

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLNRTIRCFAAGAAFIVFAAQPALAQAPGGATPPPPQVFVVDIKPHDVPVTYEYAARIS
CCCCCEEEEEECCCEEEEEECCCHHHCCCCCCCCCCCCEEEEEECCCCCCEEHHHHHHHH
AYRNVQVRARVGGILLHRNFVEGTQVKAGEVLFEIDPAPYQAELEKAQAQVAQAEAQYQQ
HHCCEEEEEEECEEEEEECCCCCCCEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
SIRDAERAEQLVQQKVQSAAVRDSAFATRDLNKAAVAAAKAQLRTAELNLSYTKVTAPIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEEEEEEEEEEECCCC
GITSQEQVNEGSLIGTDASSSLLTSVTQLDPVYVNFSFTDTEAAEIAKLRAERGATGEDA
CCCCHHHCCCCCEEECCCCHHHHHHHHHCCEEEEEEEECCCHHHHHHHHHHHCCCCCCCC
DRLKIKILFGDGKAYDHEGTIDFTSSSLDTETGTLGVRAVVENPNHRLIPGQFVRAEILD
CEEEEEEEEECCCEECCCCCEEEECCCCCCCCCCEEEEEEEECCCCEECCCCEEEEEEEE
IQVKDAITVPKAALMQSAQGQFVYVVNKDNVVEVRPVTGARELKNDWLISQGLNSGDRVI
EEECCCCCCCHHHHHHCCCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHCCCCCCCHHH
TEGVIKAVPGRPVQPVVQGVDDKAQAEAGKEQAADKK
HHHHHHCCCCCCHHHHHHCCCCHHHHHCCHHHCCCCC
>Mature Secondary Structure 
TLNRTIRCFAAGAAFIVFAAQPALAQAPGGATPPPPQVFVVDIKPHDVPVTYEYAARIS
CCCCEEEEEECCCEEEEEECCCHHHCCCCCCCCCCCCEEEEEECCCCCCEEHHHHHHHH
AYRNVQVRARVGGILLHRNFVEGTQVKAGEVLFEIDPAPYQAELEKAQAQVAQAEAQYQQ
HHCCEEEEEEECEEEEEECCCCCCCEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
SIRDAERAEQLVQQKVQSAAVRDSAFATRDLNKAAVAAAKAQLRTAELNLSYTKVTAPIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEEEEEEEEEEECCCC
GITSQEQVNEGSLIGTDASSSLLTSVTQLDPVYVNFSFTDTEAAEIAKLRAERGATGEDA
CCCCHHHCCCCCEEECCCCHHHHHHHHHCCEEEEEEEECCCHHHHHHHHHHHCCCCCCCC
DRLKIKILFGDGKAYDHEGTIDFTSSSLDTETGTLGVRAVVENPNHRLIPGQFVRAEILD
CEEEEEEEEECCCEECCCCCEEEECCCCCCCCCCEEEEEEEECCCCEECCCCEEEEEEEE
IQVKDAITVPKAALMQSAQGQFVYVVNKDNVVEVRPVTGARELKNDWLISQGLNSGDRVI
EEECCCCCCCHHHHHHCCCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHCCCCCCCHHH
TEGVIKAVPGRPVQPVVQGVDDKAQAEAGKEQAADKK
HHHHHHCCCCCCHHHHHHCCCCHHHHHCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]