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The map label for this gene is ycjO [C]

Identifier: 225851763

GI number: 225851763

Start: 248613

End: 249536

Strand: Direct

Name: ycjO [C]

Synonym: BMEA_A0244

Alternate gene names: 225851763

Gene position: 248613-249536 (Clockwise)

Preceding gene: 225851762

Following gene: 225851764

Centisome position: 11.7

GC content: 58.66

Gene sequence:

>924_bases
ATGCGCCGAACCCAGTATTTGGGATGGATAATGTTTAAAAGACTTTCCCCGCCGGTCCTGTTGTTGCTTCCGGCCTTCAT
CATTCTGGCTGCGGTGGTGCTCTTTCCTCTTGCGCTTTCGCTTTATTCCAGCTTCACGCCGTTTCGCCTGACGCGCCCGG
AAACGCTGTTCCGCTTTATCGGCCTGCGCAATTATGAGCGCATCCTGAGTGACTGGGTGTTCTGGGCAGCCTTTCTGCGC
ACGGTGTTTTTTCTGACCATCGCACTCAATCTGGAAATGCTTCTGGGGCTGGGATTGGCGCTTCTGGTCAACAAGGCCAC
ATGGGGCAAGCGCACCCTGCGCACGCTCATGATGTTTCCAATGATGTTCTCGCCGGTTCTGGTGGGCTTCCAGTTCAAGT
TCATGTTCAACGACAATATCGGCCTGGTGAATAATGCGCTTCAGTCGCTGGGGCTGACCGACAGGGCGATCCCCTGGCTT
ATCGATGGCAATCTGGCGCTGGTGGCGATCCTGACCGCCGAAGTCTGGTCGTCCACCGCCGTCTTTGCAATCCTCATTCT
GGCCGGGCTTCTCGCCATGCCGCAGGACCCGGTGGAAGCTGCCCGCGTGGATGGCTGCACGCCATGGCAAACCTTCCGCT
ATGTCATCTGGCCCTATCTCATGCCCTTCGCCTATATCGCGATGACCATTCGTTCGCTCGATGTGGCGCGCGCCTATGAT
ATCGTGAAGATCATGACCGATGGCGGCCCGGCGCGGCGCACGGAGCTGATCTGGACCCTCGTGGGCCGCACGGCCTACTC
GGATGCGCAGATGGGCCTTGCCAATGCCATGGCCTATGTCGCGATCCTTCTCTCCATCCTCTTCACCGTCATTTTCTTCC
GCAAGCTTGCCGCCGCGCGCACGCAGATCGGAGCGGAGTGGTAG

Upstream 100 bases:

>100_bases
GAAGGCGACCCAGATTCTGGAAGACGCCGGCGACCTTTGACCGTCCGATTTTCGGCAGGCCCGCTTTTCCGCAAGGGGTG
GCGGGCCGTTTCGGCAGCTC

Downstream 100 bases:

>100_bases
TCATGGCCCAATCCTTGAGCAATGCCCAACACCGTATGCGCCGCCGCATTGCGCGCGTTTTCTATCTCGTGGGCCTGTTT
CTGGCTATGCTTGTCATATG

Product: binding-protein-dependent transport systems inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MRRTQYLGWIMFKRLSPPVLLLLPAFIILAAVVLFPLALSLYSSFTPFRLTRPETLFRFIGLRNYERILSDWVFWAAFLR
TVFFLTIALNLEMLLGLGLALLVNKATWGKRTLRTLMMFPMMFSPVLVGFQFKFMFNDNIGLVNNALQSLGLTDRAIPWL
IDGNLALVAILTAEVWSSTAVFAILILAGLLAMPQDPVEAARVDGCTPWQTFRYVIWPYLMPFAYIAMTIRSLDVARAYD
IVKIMTDGGPARRTELIWTLVGRTAYSDAQMGLANAMAYVAILLSILFTVIFFRKLAAARTQIGAEW

Sequences:

>Translated_307_residues
MRRTQYLGWIMFKRLSPPVLLLLPAFIILAAVVLFPLALSLYSSFTPFRLTRPETLFRFIGLRNYERILSDWVFWAAFLR
TVFFLTIALNLEMLLGLGLALLVNKATWGKRTLRTLMMFPMMFSPVLVGFQFKFMFNDNIGLVNNALQSLGLTDRAIPWL
IDGNLALVAILTAEVWSSTAVFAILILAGLLAMPQDPVEAARVDGCTPWQTFRYVIWPYLMPFAYIAMTIRSLDVARAYD
IVKIMTDGGPARRTELIWTLVGRTAYSDAQMGLANAMAYVAILLSILFTVIFFRKLAAARTQIGAEW
>Mature_307_residues
MRRTQYLGWIMFKRLSPPVLLLLPAFIILAAVVLFPLALSLYSSFTPFRLTRPETLFRFIGLRNYERILSDWVFWAAFLR
TVFFLTIALNLEMLLGLGLALLVNKATWGKRTLRTLMMFPMMFSPVLVGFQFKFMFNDNIGLVNNALQSLGLTDRAIPWL
IDGNLALVAILTAEVWSSTAVFAILILAGLLAMPQDPVEAARVDGCTPWQTFRYVIWPYLMPFAYIAMTIRSLDVARAYD
IVKIMTDGGPARRTELIWTLVGRTAYSDAQMGLANAMAYVAILLSILFTVIFFRKLAAARTQIGAEW

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=245, Percent_Identity=27.3469387755102, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1789861, Length=286, Percent_Identity=24.4755244755245, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI1790465, Length=241, Percent_Identity=28.2157676348548, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34744; Mature: 34744

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRTQYLGWIMFKRLSPPVLLLLPAFIILAAVVLFPLALSLYSSFTPFRLTRPETLFRFI
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHH
GLRNYERILSDWVFWAAFLRTVFFLTIALNLEMLLGLGLALLVNKATWGKRTLRTLMMFP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
MMFSPVLVGFQFKFMFNDNIGLVNNALQSLGLTDRAIPWLIDGNLALVAILTAEVWSSTA
HHHHHHHHCEEEEEEEECCCHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHH
VFAILILAGLLAMPQDPVEAARVDGCTPWQTFRYVIWPYLMPFAYIAMTIRSLDVARAYD
HHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVKIMTDGGPARRTELIWTLVGRTAYSDAQMGLANAMAYVAILLSILFTVIFFRKLAAAR
HHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TQIGAEW
HHCCCCC
>Mature Secondary Structure
MRRTQYLGWIMFKRLSPPVLLLLPAFIILAAVVLFPLALSLYSSFTPFRLTRPETLFRFI
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHH
GLRNYERILSDWVFWAAFLRTVFFLTIALNLEMLLGLGLALLVNKATWGKRTLRTLMMFP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
MMFSPVLVGFQFKFMFNDNIGLVNNALQSLGLTDRAIPWLIDGNLALVAILTAEVWSSTA
HHHHHHHHCEEEEEEEECCCHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHH
VFAILILAGLLAMPQDPVEAARVDGCTPWQTFRYVIWPYLMPFAYIAMTIRSLDVARAYD
HHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVKIMTDGGPARRTELIWTLVGRTAYSDAQMGLANAMAYVAILLSILFTVIFFRKLAAAR
HHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TQIGAEW
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]