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The map label for this gene is ytfM [H]

Identifier: 225851590

GI number: 225851590

Start: 52148

End: 54067

Strand: Direct

Name: ytfM [H]

Synonym: BMEA_A0049

Alternate gene names: 225851590

Gene position: 52148-54067 (Clockwise)

Preceding gene: 225851589

Following gene: 225851591

Centisome position: 2.45

GC content: 59.22

Gene sequence:

>1920_bases
ATGCTGTTGCTGGCGGCGCATTTTTCCTCCTTCGCGCTGTCGCCTGCATTGGCGTTTGAGATTTTTGGCATTCACCTATG
GGGCAAGGACAAGAAGCAAGACCCCGACATCATCGATCCCAAGACCTATAGCGTCGATGTCACCACCACTGGCGATCGCA
AGAATGCGGACGGCAAGGAAGCGGACCTGAAATCAGTTATCGAAGGCGCATCCGGTCTGGTTTCGGATGCGGACAAGCCC
GCTTCCGGCTCGGCGGGTCTGCTGGCCAAGGCGCGCGGCGATTATCGCCGTATCCTGTCGGCGCTTTATGGTGAAGGCCG
CTACGGCGGCACCATCTCCATCAAGGTCGATGGCCGCGAGGCGAACGATATTCCGCCCGACACGGAAATTCCCAATAATG
CGAAGGTTGCAATCACGGTTGATCCGGGGCCGCAATTCCTGTTCTCGCGCACGGCTATTTCAAATATCGCCCCGCCGCCC
GGCAACAGGCGCGATAAAGTGCAGACGCCGGAAGAGGCGGGCTTTGCACCGGGGCAGGAAGCGAAATCCGGCACGATCTT
GAAGGCGGAACGCCTTGCCGTCGAAGCCTGGCGTCAGGAAGGATATGCCAAGGCCCGTGTCACGGGCGAGGATGTCGTTG
CCGACCATGCCGATAACCGCGTTTCCGCCGATATTGCACTCGATCCGGGTAGGAAAGCCTATTATGGGCCGGTCAGCGTG
GTGGGCACCGCGCGCATGGACCCGCAATTCGTGGCCTGGATGACGGGCCTGAAGCCCGGTCAGGAATATGATCCCGACGA
TATTGAAAATGCCAAGAAGCGTCTTGGGCGCATGGAAGTCTTCCGCGCCATGACCTTCGAGGAAGCCGACAAGATCGAAC
TGGATGGCAGTCTGCCGATAACGCTCAATGTTCAGGAGCGCAAGCCGCGCCGCTTTGGCTTCGGCGCTGAATATTCCACC
ATCGATGGCTTCGGTGTGACGAGCTACTGGATGCACCGCAACCTGTTGGGCCGGGGCGAGCGCCTGCGCTTCGATGCGAA
GGTCAGCGGCATTGGCGGCTCGCAGGATAATTCCTTCGATCCCAAGAATTATACCTATCTTCTGGGTGCCTCCTTCGCCA
AGCCCGGCGTCTATACGCCGGACACGGATTTTGTCGCCACACTCGATGCCAAACGCGAAGTGCTGGACGCCTATACGGAA
ACGTCCATCAATGCCAAGACCGGCTTTACGCAGATTTTCAGCGACGAGTTGTCGGGCGCGCTCTATGCCAATGCAAGCCA
GGGCCACTTCGTTGACGATGTGTTTGGCAAGCGGGATTTCACGACTGCGGGGCTTGAGGGCAATTTGCTCTATGATAGCC
GCAACAATAAGCCCGACCCAAGTTCCGGTTTCTATCTGGTGGGCAATATCCAGCCCTTCTATGAATTCCATTATGGCAAT
TTCGCCACGCGGTTCACCGCTGAAGGCCGCACCTATCACGGTTTCGGCCAGACGGATCGTGTGGTTCTCGCAGGCCGGTT
GAAGGTCGGCTCCATCGTTGGCGGGTCGATTGCAGATCTGCCACCCAGCCAGCTTTTCCTCGCTGGCGGCGGCGGCTCGG
TTCGCGGCTACGGTTATCGCAATATCGGCGTCAGCGCCGGAAACGGGAACATCATCGGCGGGCGCTCGCTCGTCGAGGCC
AATGGCGAAGTGCGCACACGCATTACCGATTCCATCGGGGCGGTGGCCTTCGTGGATGCGGGCTATGTGGGTGAAAAATC
CTTCCCCGATTTCTCCGAGCAGATGCGCGTCGGGGTGGGCGGCGGCTTGCGCTATCTTACCAGCCTTGGACCGATCCGGC
TTGATGTCGCCGTTCCGCTCAACCGGCGCTCCGGCGATCCGAACTATGGTTTCTACGTAGGCATAGGACAGGCGTTTTGA

Upstream 100 bases:

>100_bases
GGGACATGACGGGGCGCTGCCAGGCGACCGCACAGACAGGAACCGGACAGTAGCGCGTATGATTTGGAGTAACAGGACGA
TACGGGGAAGGGGCATTGCC

Downstream 100 bases:

>100_bases
CCAGATTATTCGCAATCATCGCCTTCTTTGTTTTCGTCGTTGCGGCGGCCGTTTTCGCTTGGCCTGAACAAAAGGTGCAA
ATGCCTGCGCAGGCTCAGGC

Product: surface antigen D15

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 639; Mature: 639

Protein sequence:

>639_residues
MLLLAAHFSSFALSPALAFEIFGIHLWGKDKKQDPDIIDPKTYSVDVTTTGDRKNADGKEADLKSVIEGASGLVSDADKP
ASGSAGLLAKARGDYRRILSALYGEGRYGGTISIKVDGREANDIPPDTEIPNNAKVAITVDPGPQFLFSRTAISNIAPPP
GNRRDKVQTPEEAGFAPGQEAKSGTILKAERLAVEAWRQEGYAKARVTGEDVVADHADNRVSADIALDPGRKAYYGPVSV
VGTARMDPQFVAWMTGLKPGQEYDPDDIENAKKRLGRMEVFRAMTFEEADKIELDGSLPITLNVQERKPRRFGFGAEYST
IDGFGVTSYWMHRNLLGRGERLRFDAKVSGIGGSQDNSFDPKNYTYLLGASFAKPGVYTPDTDFVATLDAKREVLDAYTE
TSINAKTGFTQIFSDELSGALYANASQGHFVDDVFGKRDFTTAGLEGNLLYDSRNNKPDPSSGFYLVGNIQPFYEFHYGN
FATRFTAEGRTYHGFGQTDRVVLAGRLKVGSIVGGSIADLPPSQLFLAGGGGSVRGYGYRNIGVSAGNGNIIGGRSLVEA
NGEVRTRITDSIGAVAFVDAGYVGEKSFPDFSEQMRVGVGGGLRYLTSLGPIRLDVAVPLNRRSGDPNYGFYVGIGQAF

Sequences:

>Translated_639_residues
MLLLAAHFSSFALSPALAFEIFGIHLWGKDKKQDPDIIDPKTYSVDVTTTGDRKNADGKEADLKSVIEGASGLVSDADKP
ASGSAGLLAKARGDYRRILSALYGEGRYGGTISIKVDGREANDIPPDTEIPNNAKVAITVDPGPQFLFSRTAISNIAPPP
GNRRDKVQTPEEAGFAPGQEAKSGTILKAERLAVEAWRQEGYAKARVTGEDVVADHADNRVSADIALDPGRKAYYGPVSV
VGTARMDPQFVAWMTGLKPGQEYDPDDIENAKKRLGRMEVFRAMTFEEADKIELDGSLPITLNVQERKPRRFGFGAEYST
IDGFGVTSYWMHRNLLGRGERLRFDAKVSGIGGSQDNSFDPKNYTYLLGASFAKPGVYTPDTDFVATLDAKREVLDAYTE
TSINAKTGFTQIFSDELSGALYANASQGHFVDDVFGKRDFTTAGLEGNLLYDSRNNKPDPSSGFYLVGNIQPFYEFHYGN
FATRFTAEGRTYHGFGQTDRVVLAGRLKVGSIVGGSIADLPPSQLFLAGGGGSVRGYGYRNIGVSAGNGNIIGGRSLVEA
NGEVRTRITDSIGAVAFVDAGYVGEKSFPDFSEQMRVGVGGGLRYLTSLGPIRLDVAVPLNRRSGDPNYGFYVGIGQAF
>Mature_639_residues
MLLLAAHFSSFALSPALAFEIFGIHLWGKDKKQDPDIIDPKTYSVDVTTTGDRKNADGKEADLKSVIEGASGLVSDADKP
ASGSAGLLAKARGDYRRILSALYGEGRYGGTISIKVDGREANDIPPDTEIPNNAKVAITVDPGPQFLFSRTAISNIAPPP
GNRRDKVQTPEEAGFAPGQEAKSGTILKAERLAVEAWRQEGYAKARVTGEDVVADHADNRVSADIALDPGRKAYYGPVSV
VGTARMDPQFVAWMTGLKPGQEYDPDDIENAKKRLGRMEVFRAMTFEEADKIELDGSLPITLNVQERKPRRFGFGAEYST
IDGFGVTSYWMHRNLLGRGERLRFDAKVSGIGGSQDNSFDPKNYTYLLGASFAKPGVYTPDTDFVATLDAKREVLDAYTE
TSINAKTGFTQIFSDELSGALYANASQGHFVDDVFGKRDFTTAGLEGNLLYDSRNNKPDPSSGFYLVGNIQPFYEFHYGN
FATRFTAEGRTYHGFGQTDRVVLAGRLKVGSIVGGSIADLPPSQLFLAGGGGSVRGYGYRNIGVSAGNGNIIGGRSLVEA
NGEVRTRITDSIGAVAFVDAGYVGEKSFPDFSEQMRVGVGGGLRYLTSLGPIRLDVAVPLNRRSGDPNYGFYVGIGQAF

Specific function: Unknown

COG id: COG0729

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0698 [H]

Homologues:

Organism=Escherichia coli, GI1790666, Length=446, Percent_Identity=23.9910313901345, Blast_Score=93, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 68884; Mature: 68884

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLLAAHFSSFALSPALAFEIFGIHLWGKDKKQDPDIIDPKTYSVDVTTTGDRKNADGKE
CEEEEEECCHHHCCCEEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCH
ADLKSVIEGASGLVSDADKPASGSAGLLAKARGDYRRILSALYGEGRYGGTISIKVDGRE
HHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCEEEEEECCCC
ANDIPPDTEIPNNAKVAITVDPGPQFLFSRTAISNIAPPPGNRRDKVQTPEEAGFAPGQE
CCCCCCCCCCCCCCEEEEEECCCCCCEEEHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCC
AKSGTILKAERLAVEAWRQEGYAKARVTGEDVVADHADNRVSADIALDPGRKAYYGPVSV
CCCCCEEEHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCEEEEEEECCCCCEECCCEEE
VGTARMDPQFVAWMTGLKPGQEYDPDDIENAKKRLGRMEVFRAMTFEEADKIELDGSLPI
EEECCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEE
TLNVQERKPRRFGFGAEYSTIDGFGVTSYWMHRNLLGRGERLRFDAKVSGIGGSQDNSFD
EEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCC
PKNYTYLLGASFAKPGVYTPDTDFVATLDAKREVLDAYTETSINAKTGFTQIFSDELSGA
CCCEEEEEECCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCE
LYANASQGHFVDDVFGKRDFTTAGLEGNLLYDSRNNKPDPSSGFYLVGNIQPFYEFHYGN
EEECCCCCCCHHHHCCCCCCEECCCCCCEEECCCCCCCCCCCCEEEEECCCEEEEEECCC
FATRFTAEGRTYHGFGQTDRVVLAGRLKVGSIVGGSIADLPPSQLFLAGGGGSVRGYGYR
EEEEEEECCCEEECCCCCCCEEEEECEEECEEECCCCCCCCCCCEEEECCCCCCCCCEEE
NIGVSAGNGNIIGGRSLVEANGEVRTRITDSIGAVAFVDAGYVGEKSFPDFSEQMRVGVG
EEEEECCCCCEECCCEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCHHHHHEECCC
GGLRYLTSLGPIRLDVAVPLNRRSGDPNYGFYVGIGQAF
CCHHHHHCCCCEEEEEEEECCCCCCCCCCEEEEEECCCC
>Mature Secondary Structure
MLLLAAHFSSFALSPALAFEIFGIHLWGKDKKQDPDIIDPKTYSVDVTTTGDRKNADGKE
CEEEEEECCHHHCCCEEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCH
ADLKSVIEGASGLVSDADKPASGSAGLLAKARGDYRRILSALYGEGRYGGTISIKVDGRE
HHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCEEEEEECCCC
ANDIPPDTEIPNNAKVAITVDPGPQFLFSRTAISNIAPPPGNRRDKVQTPEEAGFAPGQE
CCCCCCCCCCCCCCEEEEEECCCCCCEEEHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCC
AKSGTILKAERLAVEAWRQEGYAKARVTGEDVVADHADNRVSADIALDPGRKAYYGPVSV
CCCCCEEEHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCEEEEEEECCCCCEECCCEEE
VGTARMDPQFVAWMTGLKPGQEYDPDDIENAKKRLGRMEVFRAMTFEEADKIELDGSLPI
EEECCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEE
TLNVQERKPRRFGFGAEYSTIDGFGVTSYWMHRNLLGRGERLRFDAKVSGIGGSQDNSFD
EEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCC
PKNYTYLLGASFAKPGVYTPDTDFVATLDAKREVLDAYTETSINAKTGFTQIFSDELSGA
CCCEEEEEECCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCE
LYANASQGHFVDDVFGKRDFTTAGLEGNLLYDSRNNKPDPSSGFYLVGNIQPFYEFHYGN
EEECCCCCCCHHHHCCCCCCEECCCCCCEEECCCCCCCCCCCCEEEEECCCEEEEEECCC
FATRFTAEGRTYHGFGQTDRVVLAGRLKVGSIVGGSIADLPPSQLFLAGGGGSVRGYGYR
EEEEEEECCCEEECCCCCCCEEEEECEEECEEECCCCCCCCCCCEEEECCCCCCCCCEEE
NIGVSAGNGNIIGGRSLVEANGEVRTRITDSIGAVAFVDAGYVGEKSFPDFSEQMRVGVG
EEEEECCCCCEECCCEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCHHHHHEECCC
GGLRYLTSLGPIRLDVAVPLNRRSGDPNYGFYVGIGQAF
CCHHHHHCCCCEEEEEEEECCCCCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]