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The map label for this gene is cycM [H]

Identifier: 225851582

GI number: 225851582

Start: 44287

End: 44895

Strand: Direct

Name: cycM [H]

Synonym: BMEA_A0041

Alternate gene names: 225851582

Gene position: 44287-44895 (Clockwise)

Preceding gene: 225851579

Following gene: 225851584

Centisome position: 2.08

GC content: 56.98

Gene sequence:

>609_bases
ATGAATTCAACCCGGAATAACAAATTTATTATGGCATTTCTGGCAACGGTTTTCGTTGTCATGACGACGGGCATTCTGTC
TGATTCGCTGTTTCATTCGCCGGCTCCTGAAAAGCCGGGCTTTGCCATAGAGGTAGCCCAAGGTTCGGGGGGCGGAGAAA
GTGCTGCGCCTCCCGCCAAGGAAGAAGTTTCAATTGCAACCCTGTTGCAAAGTGCCGATCCGGCGCGTGGCGAAGTGGTT
TTCAAGCGTTGCCAGGCTTGCCACACCGGGGACAAGGGCGGGGCCAACAAGGTTGGTCCGCATCTGTGGGGTGTCGTGGG
TCGCCCGGCTGCCTCCGTTGAAGGTTTCAGCTATTCCGCTGCCATGAAGGAATTCGGCGCGGCTGGCAACAAGTGGGATT
TTGAGCATCTCAACAAGTTCCTCACCTCGCCGAAAGGCTTCATCAAGGGTACAGCCATGGGCTTTGCCGGTGACAAGAAG
GATAATGAGCGCGCTGACCTGATTGCTTATCTGCGCACGCTGTCCGACAATCCGGTGCCGCTGCCGGCCGCAGACGCAGC
GCCCGCAGATAGCGATAAAAAGCCCGCCGAAGCTGCACCGGCCAATTGA

Upstream 100 bases:

>100_bases
GGGGAGATATTTGCCAGCTTTTTGAGAAGGTTTCGCCTTTTGAAAGGGTTTCGCATGCCGGCTTAGGAGAGCGTTGTGGT
AGAGGGAGCGCTGACCGGAG

Downstream 100 bases:

>100_bases
GCCGGCTGAAACGATAATTCCAGGCCGGGCCTCGTGCCCGGCTTTTATAGCAGCAGCCCGCCGACCCCCATGCGCGCAAG
GTGCGTCGCGTCGAGTTCCA

Product: cytochrome c

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MNSTRNNKFIMAFLATVFVVMTTGILSDSLFHSPAPEKPGFAIEVAQGSGGGESAAPPAKEEVSIATLLQSADPARGEVV
FKRCQACHTGDKGGANKVGPHLWGVVGRPAASVEGFSYSAAMKEFGAAGNKWDFEHLNKFLTSPKGFIKGTAMGFAGDKK
DNERADLIAYLRTLSDNPVPLPAADAAPADSDKKPAEAAPAN

Sequences:

>Translated_202_residues
MNSTRNNKFIMAFLATVFVVMTTGILSDSLFHSPAPEKPGFAIEVAQGSGGGESAAPPAKEEVSIATLLQSADPARGEVV
FKRCQACHTGDKGGANKVGPHLWGVVGRPAASVEGFSYSAAMKEFGAAGNKWDFEHLNKFLTSPKGFIKGTAMGFAGDKK
DNERADLIAYLRTLSDNPVPLPAADAAPADSDKKPAEAAPAN
>Mature_202_residues
MNSTRNNKFIMAFLATVFVVMTTGILSDSLFHSPAPEKPGFAIEVAQGSGGGESAAPPAKEEVSIATLLQSADPARGEVV
FKRCQACHTGDKGGANKVGPHLWGVVGRPAASVEGFSYSAAMKEFGAAGNKWDFEHLNKFLTSPKGFIKGTAMGFAGDKK
DNERADLIAYLRTLSDNPVPLPAADAAPADSDKKPAEAAPAN

Specific function: May be involved in electron transfer from bc1 complex to aa3 [H]

COG id: COG3474

COG function: function code C; Cytochrome c2

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family [H]

Homologues:

Organism=Homo sapiens, GI11128019, Length=106, Percent_Identity=43.3962264150943, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17539604, Length=104, Percent_Identity=48.0769230769231, Blast_Score=88, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17566554, Length=100, Percent_Identity=46, Blast_Score=82, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6320796, Length=97, Percent_Identity=47.4226804123711, Blast_Score=96, Evalue=4e-21,
Organism=Saccharomyces cerevisiae, GI6322508, Length=107, Percent_Identity=42.0560747663551, Blast_Score=91, Evalue=1e-19,
Organism=Drosophila melanogaster, GI17137228, Length=104, Percent_Identity=46.1538461538462, Blast_Score=92, Evalue=2e-19,
Organism=Drosophila melanogaster, GI17137204, Length=106, Percent_Identity=43.3962264150943, Blast_Score=86, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002327
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 21079; Mature: 21079

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSTRNNKFIMAFLATVFVVMTTGILSDSLFHSPAPEKPGFAIEVAQGSGGGESAAPPAK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCH
EEVSIATLLQSADPARGEVVFKRCQACHTGDKGGANKVGPHLWGVVGRPAASVEGFSYSA
HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHH
AMKEFGAAGNKWDFEHLNKFLTSPKGFIKGTAMGFAGDKKDNERADLIAYLRTLSDNPVP
HHHHHCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
LPAADAAPADSDKKPAEAAPAN
CCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNSTRNNKFIMAFLATVFVVMTTGILSDSLFHSPAPEKPGFAIEVAQGSGGGESAAPPAK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCH
EEVSIATLLQSADPARGEVVFKRCQACHTGDKGGANKVGPHLWGVVGRPAASVEGFSYSA
HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHH
AMKEFGAAGNKWDFEHLNKFLTSPKGFIKGTAMGFAGDKKDNERADLIAYLRTLSDNPVP
HHHHHCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
LPAADAAPADSDKKPAEAAPAN
CCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]