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The map label for this gene is nudC [H]

Identifier: 225851579

GI number: 225851579

Start: 41254

End: 42201

Strand: Direct

Name: nudC [H]

Synonym: BMEA_A0038

Alternate gene names: 225851579

Gene position: 41254-42201 (Clockwise)

Preceding gene: 225851578

Following gene: 225851582

Centisome position: 1.94

GC content: 60.02

Gene sequence:

>948_bases
ATGGCTTTTCGCCTCTACGACCTGCCGGAAATGGAACCGAGCCGTTTTGTCGGTTTTGCCGGAAACCGCATCGAGCGGCT
ATCCGAAAAGCGGCCGGATGATTCTGCTTTCACGGCGCTGGAACTTCCTGAAACACGGATAATGATTCTGGGCGACCACA
AGCTGCTGCTTGATTATGGGCAGGAAGACGCGCCGCGTGCGCTGTTTTCTCTGGAGGAAGCGCATCAATTCGTGCTCGAT
CTTTGCGAGCCGGTTCTGCTTGGCCTTCAGGACGGCACGCCCCTCGTGGCTCTGACGGCCACCCTCTACCCGGAGGCTCT
GCCAGCGCCTTTCCGCCTGCAGGACTATCGCAGTGTCTATACGGAAGGGCTGGTCCCGGCTGACCTTCTGGGCGCGCTGG
CGCAAGCTGCGGCGCTGACCGCATGGCATGAAAGTCACCGTTTCTGCGGACCTTGCGGCACGAAAACCGAAATGCGCGCA
GGCGGTGCCAAGTGTCTATGTCCCCAGTGCGGTGCGGAACATTTTCCGCGCACCGATCCGGTGGCGATCATGCTGCCAGT
GCGCGGCGAAAAATGCATTCTGGCCCGTGGCCCCCATTTCGTGGCCGGCTCCTATTCTTGTCTCGCGGGCTTTATCGAGC
ATGGCGAAACGATCGAAGCCGCCGTGCGCCGGGAAAGTTTTGAGGAAATGAAACTGGCGATCGGCCGTGTCGCCTATCAC
GCGAGCCAGCCCTGGCCGTTTCCCTATTCGCTGATGATCGGCTGCCATGCCGAAGTTCTCAGTGACGATTTCACTGTCGA
CCGCTCGGAACTGGAAGATGGCCGCTGGTTCTCGAAGGCGGAAGTGCGCACCATGCTGGAAGGTACCCATGAAAATGGGT
TGCGGGTGCCGCCATGCGGCGCCATCGCAACCCATCTGATAAAGGCCTGGGCTTATGATGCAGGCTGA

Upstream 100 bases:

>100_bases
CATGGCGTCCGCGAGACCTATGACGAGAAAGACGCCCAGAAACTCATTGCCGAGGTTCGCGCGGCACTCTGATCTCCCAA
AATCCTTTCGAGAGACGCTC

Downstream 100 bases:

>100_bases
TTATTCGGCAGCCAGTAGCTGCGTACCGCGAATATCGCTTCCCTTGTAAACGCCCAGAATTCGCACTTCCTTGGTGAAGA
AGCGCAGTTCTTCCAGTGCA

Product: peroxisomal NADH pyrophosphatase NUDT12

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MAFRLYDLPEMEPSRFVGFAGNRIERLSEKRPDDSAFTALELPETRIMILGDHKLLLDYGQEDAPRALFSLEEAHQFVLD
LCEPVLLGLQDGTPLVALTATLYPEALPAPFRLQDYRSVYTEGLVPADLLGALAQAAALTAWHESHRFCGPCGTKTEMRA
GGAKCLCPQCGAEHFPRTDPVAIMLPVRGEKCILARGPHFVAGSYSCLAGFIEHGETIEAAVRRESFEEMKLAIGRVAYH
ASQPWPFPYSLMIGCHAEVLSDDFTVDRSELEDGRWFSKAEVRTMLEGTHENGLRVPPCGAIATHLIKAWAYDAG

Sequences:

>Translated_315_residues
MAFRLYDLPEMEPSRFVGFAGNRIERLSEKRPDDSAFTALELPETRIMILGDHKLLLDYGQEDAPRALFSLEEAHQFVLD
LCEPVLLGLQDGTPLVALTATLYPEALPAPFRLQDYRSVYTEGLVPADLLGALAQAAALTAWHESHRFCGPCGTKTEMRA
GGAKCLCPQCGAEHFPRTDPVAIMLPVRGEKCILARGPHFVAGSYSCLAGFIEHGETIEAAVRRESFEEMKLAIGRVAYH
ASQPWPFPYSLMIGCHAEVLSDDFTVDRSELEDGRWFSKAEVRTMLEGTHENGLRVPPCGAIATHLIKAWAYDAG
>Mature_314_residues
AFRLYDLPEMEPSRFVGFAGNRIERLSEKRPDDSAFTALELPETRIMILGDHKLLLDYGQEDAPRALFSLEEAHQFVLDL
CEPVLLGLQDGTPLVALTATLYPEALPAPFRLQDYRSVYTEGLVPADLLGALAQAAALTAWHESHRFCGPCGTKTEMRAG
GAKCLCPQCGAEHFPRTDPVAIMLPVRGEKCILARGPHFVAGSYSCLAGFIEHGETIEAAVRRESFEEMKLAIGRVAYHA
SQPWPFPYSLMIGCHAEVLSDDFTVDRSELEDGRWFSKAEVRTMLEGTHENGLRVPPCGAIATHLIKAWAYDAG

Specific function: Unknown

COG id: COG2816

COG function: function code L; NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI13899267, Length=190, Percent_Identity=47.3684210526316, Blast_Score=173, Evalue=2e-43,
Organism=Homo sapiens, GI50593112, Length=189, Percent_Identity=42.3280423280423, Blast_Score=142, Evalue=3e-34,
Organism=Escherichia coli, GI48994995, Length=205, Percent_Identity=31.219512195122, Blast_Score=105, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI71986510, Length=343, Percent_Identity=25.6559766763848, Blast_Score=100, Evalue=7e-22,
Organism=Caenorhabditis elegans, GI212645999, Length=340, Percent_Identity=25.8823529411765, Blast_Score=100, Evalue=1e-21,
Organism=Saccharomyces cerevisiae, GI6321371, Length=238, Percent_Identity=30.672268907563, Blast_Score=90, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015375
- InterPro:   IPR022925
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR015376 [H]

Pfam domain/function: PF00293 NUDIX; PF09296 NUDIX-like; PF09297 zf-NADH-PPase [H]

EC number: =3.6.1.22 [H]

Molecular weight: Translated: 34763; Mature: 34632

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFRLYDLPEMEPSRFVGFAGNRIERLSEKRPDDSAFTALELPETRIMILGDHKLLLDYG
CCEEECCCCCCCCCCEECCCCHHHHHHHHCCCCCCCEEEEECCCEEEEEEECCEEEEECC
QEDAPRALFSLEEAHQFVLDLCEPVLLGLQDGTPLVALTATLYPEALPAPFRLQDYRSVY
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHCHHHCCCCCCHHHHHHHH
TEGLVPADLLGALAQAAALTAWHESHRFCGPCGTKTEMRAGGAKCLCPQCGAEHFPRTDP
HCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCEEECCCCCCCCCCCCCC
VAIMLPVRGEKCILARGPHFVAGSYSCLAGFIEHGETIEAAVRRESFEEMKLAIGRVAYH
EEEEEECCCCEEEEECCCCEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
ASQPWPFPYSLMIGCHAEVLSDDFTVDRSELEDGRWFSKAEVRTMLEGTHENGLRVPPCG
CCCCCCCCHHHHEECHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCHH
AIATHLIKAWAYDAG
HHHHHHHHHHHCCCC
>Mature Secondary Structure 
AFRLYDLPEMEPSRFVGFAGNRIERLSEKRPDDSAFTALELPETRIMILGDHKLLLDYG
CEEECCCCCCCCCCEECCCCHHHHHHHHCCCCCCCEEEEECCCEEEEEEECCEEEEECC
QEDAPRALFSLEEAHQFVLDLCEPVLLGLQDGTPLVALTATLYPEALPAPFRLQDYRSVY
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHCHHHCCCCCCHHHHHHHH
TEGLVPADLLGALAQAAALTAWHESHRFCGPCGTKTEMRAGGAKCLCPQCGAEHFPRTDP
HCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCEEECCCCCCCCCCCCCC
VAIMLPVRGEKCILARGPHFVAGSYSCLAGFIEHGETIEAAVRRESFEEMKLAIGRVAYH
EEEEEECCCCEEEEECCCCEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
ASQPWPFPYSLMIGCHAEVLSDDFTVDRSELEDGRWFSKAEVRTMLEGTHENGLRVPPCG
CCCCCCCCHHHHEECHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCHH
AIATHLIKAWAYDAG
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA